Clone RE13854 Report

Search the DGRC for RE13854

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:138
Well:54
Vector:pFlc-1
Associated Gene/Transcriptmthl1-RA
Protein status:RE13854.pep: gold
Preliminary Size:2153
Sequenced Size:4550

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4521 2002-01-01 Sim4 clustering to Release 2
CG4521 2002-05-30 Blastp of sequenced clone
CG4521 2003-01-01 Sim4 clustering to Release 3
mthl1 2008-04-29 Release 5.5 accounting
mthl1 2008-08-15 Release 5.9 accounting
mthl1 2008-12-18 5.12 accounting

Clone Sequence Records

RE13854.complete Sequence

4550 bp (4550 high quality bases) assembled on 2002-05-30

GenBank Submission: AY118371

> RE13854.complete
TGATCGCACAGGGTCACACTCGCCCAGGCACCCGTATAAAATCCCCGCCC
CCCTGATCGACGATAGTATTTCGAAAAAAACGCGAGGAAAAGTCTGATGC
GCGTTAAAATCGGAGCGCAAATCGTGCATATATTTTTTTTTACACACCGC
GCGCCGTGTTTACGACTGAAAACGGAGACTGACTGAAAAGCCTTGGCGCA
CAAGCACGCAATGAAAACGCAACGATAAGAATGTGATATTGTGATAAATA
CATGATTCGCTGACAACTCTATTTTATATTGGAATGCATTCGAAATCGAA
CGCAGCGCAGCGTGTGTTGTTTACTTAACGATTTTCGGTGTTTGTTTGCC
CAACTTGCGGCGGTGAAATTCAGCATTTTCTGATTTTCCATTTGCCAACG
AAAGAGAGGAAAAGTGAAAAGTGCTATTCGACGAAGCGAAACGGAACGCA
AAATCAAAAGAAAAACAGCATAGCTAAAGCTATGTGTAGTACATAGCCAC
ATAAATTGCAAATTGAGGCCAAGAGACAAGAGAACCTGAAATCCACACAG
ATCTTGACGAGTGAGCTAACGATGGACAGGAGTCGGAGTAGCAGAGCTGC
CAGCAGCAACCAGTTCATCAGGCCATGTGGCCTACTGACGACCGTCATCC
TGCTGCAGACGCTTGTGTCGATGAGTTTGGCCATCGAGGAGATGTCGCCA
CCACCGGCCGCCCCGCCACGTCCATCGCCGCCGCCCACCGTGAAGCTCAA
CAAGTGCTGCCATTCGGGCGAGTATCTGAACGATGGCACCTGCATCGCCG
GCAGCGAAGCCCTGTGGCTGCCCATGGTGTACTTGGTGCAGCAGCAGCGC
TTCTTCGAGCCCCATGGCGCCAGTCCGCGATTCTTGAAGTTCCTGCCCAA
TACGAGACCCACGTGCCGAAAGGACCAGACGACGGAGATCTTTCGCAGCC
GCGGAGCCAATGTGATGCTCTTTCCCAATGGCACGCTCTATGTGCGGGAA
CGCGCTCTAATGGTCCAGCCGTCGGATTACTGTGTCGACTGGGAGGTGGC
CGTCGTTTGCTTGAACGACAGTCAGCCGATCAATGCTCTGGAGGATCCCG
ATTATGCAGCCAATCCTCTCGTGCAGCAGGAGCCGCCCAAGGCTAGCCTG
CGACTGAGCAAGTGCTGCGGCAAGTGGGGCAGCTATAACACGCAGCTCCA
GAACTGCGATCTGCAGCCCAACCATCAGGCAGCCGTCGATGGACTGCTGC
GATTGTCGCCGCAGCTACCGGAGGGCAGCTATCAGACTAGCTACGGCCTG
CCCGACTGTGGCCAACCCGGTGGCTACTCCATTGCCGGTGATTGGCAGGA
TGCCAAGCTGGATCGGAACACGGCCATGCTCCAGTTGCCGCACAAGAACC
TCAGCGCCGGACAATACTGCCTGGAGCACACGCAGCGCGAGGGCGAGGTG
AAGATCATAGCCTGCCAGCATTTGTTTAGCTCCGCGGCAGGAGCCGGCAT
CCACGACGGCTCCATTGGAGGCACCATCGAGCAGGCCAATGGCCAGAATC
TGCAGAAGGCCGTCCTGACTGGTGGCATACTTGTGTCCATTGTCTTCCTG
TCCGCCACTTTGGTGGCCGGCTTCCTGCTGCCCGCTGTGCATCATGCGCT
TCATTGGCGCTGCCAAATCTGCTATGTCACCTGCTTGCTATTCGGCAAAA
TACTGCTGGCCATCGAGGAGCTGAGCTCCAGCCTGCAGCCGGGCAGTGCC
GCCTGCCATACGCTTGCTATCACCATGCAGTTCTTCTTTCTGGCCGCCTT
CTTTTGGCTGAACACCATGTGCTTCAACATCTGGTGGACGTTCCGGGACT
TTCGGCCCAGTTCGTTGGAACGCAATCAGGAGGCACTGCGTCGCTATCTG
TACTCCCTGTACGCTTGGGGCGGTCCTCTGCTTATCACCTTCGTGGCCGC
CTGCGTGGACCAGCTGCCGGAGACGACGCTACTGCGTCCGGGATTCGGAC
AGCTCTACTGCTGGTTCGACAATCGCAATCTCTCGATCTTCGCCTACTTC
TACGGACCCATTGGCCTGCTGCTGTGCGCCAATATAGCGCTCTTCGTGTC
CACCACCCATCAGTTGACGTGCGGCCTGTGGAAACGGGACGATGTCAAGT
CCTCATCGGAGAAGTCCGCCCTGGGACGCGTCTGCCTGAAGCTAGTCGTC
GTTATGGGTGTCACCTGGATAGCGGACATTCTGTCCTGGCTAGTGGGTGG
ACCGCATGGCGTATGGTTCTTCACCGACCTGATCAACGCCCTGCAAGGCG
TCTTCATCTTCATCGTGGTGGGCTGCCAGCCGCAGGTGTGGACCGCCTGC
CGCAGGATCTTCTGTCCGCGATTGCGTCATGACATCACCAATACGACCAA
CGGTGTCCAGCATTCGAGCAGCTCGCAGGGTTTGCCCTCGATGGCCGGCG
GCACGGAGATTACACAGAACACCACCACCACCACCACGACAACCAACACG
ACCGCCACTCACATGCCCAGCAATCCGGCGGAGGATGAGGTACCGGAGAA
GGCTCCCATTGCCCCCGTCGCACCCATCGTCAAAATGGAGACCATTTGCT
AAACACAACTGAGACGACGAGCGACAATGCGAAAGTCAGGCCCGGATACA
AAAGTCCAGACCTCGAGCGAGCGAAATAATGGCAATGGGCAGCTCAGAAA
TAAGAAAGAAAGAATGGAAAAAACACGAAAAAAAAACGCTGCCAAAGCTG
GAGTTTCGAGACGAGCGCGGCACACACTTGCGCAATCGCAGCAACAAAAC
CAAGCTGACCAGCTAATTGTGCGAGTGTACGAGCGAATGAGTGTGTGTGT
GGTTGTGTGTGTGTGCAAGCGACTTGCGCGTGATTTTGAGATCGGCCAAC
AACCGCTGGGGAACAAAACGTACTCAGTATGCCAGTATTCAACTTCAATT
TAAGCCAGCGCACAAAAGAAACGTATTATTTTATTCATCATCATCATCAT
AATCGCATAGCATCGCATCGCATCGCATCGCATCGTATCGCAGAATAACG
GTAAAGCAGTTCGGGTCACATTAACACGTTCTAATTGTACACTCCGGTCA
GTGTTGCGAAATGGAATGTGCAGCATAACGAAACAGGAATTCAGCCTAGA
CAAAACAAAGCAGCGCTATTGTGGCTCTTTCTTTCTTTTAAGCACTTTTA
GCCAACAGAAATAAAAACACGAGGGCTTTATGTGTGTGCATCTGGCTGTA
TGTATGTGTGTGGCAACCACAAGGAATTTTCTGTTGAGGCACTTTTGTTG
TTTAGTTTAGATCGCGTTGCTCTGGTTTTTTTTTTTTTACTCAAATCTCA
AGTGTGAGAAAAACAGCAGGCGCACCACACACAAACACACACACACATGC
ATGCACATATCGGATGTTTAACATTTAAATTAGCTGCTTCTGATTGGCAT
TTTCGTATGACACTGCTTGCATTCAGTTCTTTATGTGTGGGTGTGTGTGT
GTGTGTGCCTTTGACGTTTTTATTGCCTAATCACTTTTTTTTATTTGCAC
TTTACTACGAGAATACTGGACGAAAACCGCTGACTGGAACTATTTTTATG
TTTGCCCCATAATGTTTTTCAACCGAAAAATTGTATATTTTTTTTTTACG
TCTAGTGTAAACAATTGAAATTTATTTACTTCAGGGCATAAACAAAATCG
TTATACACACACATTGATAGGCGGAAACAATCAAATTGATCATCGAAAGT
TCAACGATACGCAGCGATCAAGGTTAAATGGTTCAAAATGAAAGCGCGCT
AAAATAAAAAAAAAAGGGATAAAACGGTGCGCGCGCGCACACACACACAC
ACACGCATGTGCATTTGTCAATGCAAGCAGTGCAGTTGTCCTGCATCCTG
TTTAGAAACTCCAAGTTTGAGATGTATTCCCCCTCCCAATTACAAACGTA
TTTTTATGTATTTTAGCTCTTGAAAACGCAGAAACTACAATGCAGTACAA
TTATTATTTCTCATAAGATTTATTTAATTTTTTTTTTTGTAATTAACTAA
TATTAATTTATTGCTCAAGTTACGATGGCACGTTCAACGTGCTTGAGTGA
CAATTGTATTATGTAGTAGAACTTCCAAAGTGTTCAGGCCAAAAGTAATT
CTCCCCGAACTAAAGAGCGATCATACTGAGGATGAGTGATTACATTTATA
TATATATATATATATATGATTGACTAACATATATGTATATATATATTTAT
TTACATATGTGTACATATTACTGCGTATTTTCTATGTAGCTTATTTAGTT
ATCTTGATCTAAGCAACGAATCGAATATGAAATTATCGAATGACTGAGAC
AAAGGCAGCGAATACTTTATACCAACATAGATTTTACATTTTGATACTAA
CTAACTATTAACTATTGACTATTGTATATAAACGTATTTTGTACACACCA
TATTGGCTAAGCAATTGATATAAAAAATATATATATATATGTACATTTAA
ATGAAAATGTGCATAAACAACGATTGTTAACTCGAAAAAAAAAAAAAAAA

RE13854.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:57:17
Subject Length Description Subject Range Query Range Score Percent Strand
mthl1-RA 4642 mthl1-RA 51..4583 3..4536 22585 99.9 Plus
mthl1.b 5427 mthl1.b 51..4583 3..4536 22585 99.9 Plus
mthl1.a 4816 mthl1.a 51..4583 3..4536 22585 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:47:03
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 16530576..16533177 3..2604 12920 99.8 Plus
chrX 22417052 chrX 16537456..16539382 2605..4534 9300 99.2 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:35:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:47:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16640908..16643509 3..2604 13010 100 Plus
X 23542271 X 16647769..16649699 2605..4536 9565 99.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:29:31
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 16649006..16651607 3..2604 13010 100 Plus
X 23527363 X 16655867..16657797 2605..4536 9575 99.7 Plus
Blast to na_te.dros performed on 2019-03-16 04:47:01 has no hits.

RE13854.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:48:08 Download gff for RE13854.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 16530573..16533177 1..2604 98 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:55:46 Download gff for RE13854.complete
Subject Subject Range Query Range Percent Splice Strand
mthl1-RA 1..2031 572..2602 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:36:11 Download gff for RE13854.complete
Subject Subject Range Query Range Percent Splice Strand
mthl1-RA 1..2031 572..2602 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:41:20 Download gff for RE13854.complete
Subject Subject Range Query Range Percent Splice Strand
mthl1-RA 1..2031 572..2602 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:27:47 Download gff for RE13854.complete
Subject Subject Range Query Range Percent Splice Strand
mthl1-RA 1..2031 572..2602 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:50:18 Download gff for RE13854.complete
Subject Subject Range Query Range Percent Splice Strand
mthl1-RA 1..2031 572..2602 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:08:06 Download gff for RE13854.complete
Subject Subject Range Query Range Percent Splice Strand
mthl1-RA 2..4534 2..4534 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:36:11 Download gff for RE13854.complete
Subject Subject Range Query Range Percent Splice Strand
mthl1-RA 2..4534 2..4534 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:41:20 Download gff for RE13854.complete
Subject Subject Range Query Range Percent Splice Strand
mthl1-RA 1..4471 63..4534 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:27:47 Download gff for RE13854.complete
Subject Subject Range Query Range Percent Splice Strand
mthl1-RA 2..4534 2..4534 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:50:18 Download gff for RE13854.complete
Subject Subject Range Query Range Percent Splice Strand
mthl1-RA 1..4471 63..4534 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:48:08 Download gff for RE13854.complete
Subject Subject Range Query Range Percent Splice Strand
X 16640905..16643509 1..2604 99 -> Plus
X 16647769..16649697 2605..4534 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:48:08 Download gff for RE13854.complete
Subject Subject Range Query Range Percent Splice Strand
X 16640905..16643509 1..2604 99 -> Plus
X 16647769..16649697 2605..4534 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:48:08 Download gff for RE13854.complete
Subject Subject Range Query Range Percent Splice Strand
X 16640905..16643509 1..2604 99 -> Plus
X 16647769..16649697 2605..4534 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:41:20 Download gff for RE13854.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16534938..16537542 1..2604 99 -> Plus
arm_X 16541802..16543730 2605..4534 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:00:17 Download gff for RE13854.complete
Subject Subject Range Query Range Percent Splice Strand
X 16649003..16651607 1..2604 99 -> Plus
X 16655867..16657795 2605..4534 99   Plus

RE13854.pep Sequence

Translation from 571 to 2601

> RE13854.pep
MDRSRSSRAASSNQFIRPCGLLTTVILLQTLVSMSLAIEEMSPPPAAPPR
PSPPPTVKLNKCCHSGEYLNDGTCIAGSEALWLPMVYLVQQQRFFEPHGA
SPRFLKFLPNTRPTCRKDQTTEIFRSRGANVMLFPNGTLYVRERALMVQP
SDYCVDWEVAVVCLNDSQPINALEDPDYAANPLVQQEPPKASLRLSKCCG
KWGSYNTQLQNCDLQPNHQAAVDGLLRLSPQLPEGSYQTSYGLPDCGQPG
GYSIAGDWQDAKLDRNTAMLQLPHKNLSAGQYCLEHTQREGEVKIIACQH
LFSSAAGAGIHDGSIGGTIEQANGQNLQKAVLTGGILVSIVFLSATLVAG
FLLPAVHHALHWRCQICYVTCLLFGKILLAIEELSSSLQPGSAACHTLAI
TMQFFFLAAFFWLNTMCFNIWWTFRDFRPSSLERNQEALRRYLYSLYAWG
GPLLITFVAACVDQLPETTLLRPGFGQLYCWFDNRNLSIFAYFYGPIGLL
LCANIALFVSTTHQLTCGLWKRDDVKSSSEKSALGRVCLKLVVVMGVTWI
ADILSWLVGGPHGVWFFTDLINALQGVFIFIVVGCQPQVWTACRRIFCPR
LRHDITNTTNGVQHSSSSQGLPSMAGGTEITQNTTTTTTTTNTTATHMPS
NPAEDEVPEKAPIAPVAPIVKMETIC*

RE13854.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 03:25:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20388-PA 655 GF20388-PA 44..655 57..676 2274 71.9 Plus
Dana\GF24876-PA 641 GF24876-PA 233..542 320..632 381 29.9 Plus
Dana\GF24875-PA 417 GF24875-PA 149..375 363..582 256 28.9 Plus
Dana\GF14128-PA 458 GF14128-PA 129..448 335..661 249 27.7 Plus
Dana\GF17466-PA 498 GF17466-PA 169..482 263..588 239 27.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 03:25:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19062-PA 683 GG19062-PA 16..683 11..676 3046 92 Plus
Dere\GG14666-PA 682 GG14666-PA 219..558 255..613 365 27.1 Plus
Dere\GG23966-PA 437 GG23966-PA 98..418 324..644 286 29.3 Plus
Dere\GG19456-PA 424 GG19456-PA 81..380 275..588 253 27.2 Plus
Dere\GG17551-PA 681 GG17551-PA 414..680 338..595 247 25.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 03:25:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24384-PA 664 GH24384-PA 2..594 59..635 2062 67.1 Plus
Dgri\GH15471-PA 322 GH15471-PA 16..321 310..613 352 31.9 Plus
Dgri\GH16001-PA 628 GH16001-PA 219..473 337..580 274 29.3 Plus
Dgri\GH15468-PA 452 GH15468-PA 124..438 259..582 254 27.1 Plus
Dgri\GH16000-PA 253 GH16000-PA 47..237 404..580 228 31.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:55:27
Subject Length Description Subject Range Query Range Score Percent Strand
mthl1-PB 676 CG4521-PB 1..676 1..676 3626 100 Plus
mthl1-PA 676 CG4521-PA 1..676 1..676 3626 100 Plus
mthl10-PG 575 CG17061-PG 189..546 257..645 353 26.5 Plus
mthl10-PF 575 CG17061-PF 189..546 257..645 353 26.5 Plus
mthl10-PE 575 CG17061-PE 189..546 257..645 353 26.5 Plus
mthl10-PD 557 CG17061-PD 189..556 257..653 347 26 Plus
mthl10-PA 577 CG17061-PA 189..522 257..609 346 27.4 Plus
mthl10-PC 584 CG17061-PC 189..578 257..658 345 26 Plus
mthl10-PB 585 CG17061-PB 189..556 257..645 338 25.8 Plus
mthl15-PC 718 CG31720-PC 389..701 335..651 287 28.8 Plus
mth-PE 514 CG6936-PE 221..481 336..590 273 27.9 Plus
mth-PA 514 CG6936-PA 221..481 336..590 273 27.9 Plus
mth-PB 522 CG6936-PB 221..481 336..590 273 27.9 Plus
mthl3-PC 511 CG6530-PC 216..475 333..587 269 28 Plus
mthl3-PB 511 CG6530-PB 216..475 333..587 269 28 Plus
mthl3-PA 511 CG6530-PA 216..475 333..587 269 28 Plus
mthl11-PD 515 CG31147-PD 219..504 339..613 258 25.9 Plus
mthl11-PC 532 CG31147-PC 236..521 339..613 258 25.9 Plus
mthl4-PB 517 CG6536-PB 213..473 333..589 255 27.3 Plus
mthl2-PB 518 CG17795-PB 224..509 336..617 255 28.6 Plus
mthl6-PA 480 CG16992-PA 156..428 262..558 229 26.6 Plus
mthl12-PA 488 CG32853-PA 213..475 336..583 160 23.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 03:25:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15323-PA 682 GI15323-PA 31..649 44..662 2099 65.8 Plus
Dmoj\GI16744-PA 572 GI16744-PA 217..536 310..628 378 31.5 Plus
Dmoj\GI16743-PA 523 GI16743-PA 220..476 337..582 275 32.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 03:25:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20280-PA 586 GL20280-PA 3..586 116..676 2048 69 Plus
Dper\GL16143-PA 596 GL16143-PA 287..582 277..582 249 26.9 Plus
Dper\GL23699-PA 517 GL23699-PA 166..481 258..589 234 25 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 03:25:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18231-PA 691 GA18231-PA 48..691 57..676 2271 69.2 Plus
Dpse\GA14305-PA 684 GA14305-PA 222..575 256..627 401 29.8 Plus
Dpse\GA19967-PA 670 GA19967-PA 320..615 277..582 250 27.2 Plus
Dpse\GA16045-PB 488 GA16045-PB 166..481 258..589 237 25.2 Plus
Dpse\GA26708-PB 510 GA26708-PB 216..481 338..594 207 26.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 03:25:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13452-PA 590 GM13452-PA 1..590 85..676 3081 97 Plus
Dsec\GM23213-PA 482 GM23213-PA 9..345 258..613 356 27.9 Plus
Dsec\GM11932-PA 708 GM11932-PA 368..689 324..649 282 29.6 Plus
Dsec\GM23882-PA 497 GM23882-PA 219..484 339..595 263 27 Plus
Dsec\GM13657-PA 514 GM13657-PA 219..478 333..587 240 27.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 03:25:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17291-PA 673 GD17291-PA 1..673 1..676 3503 97 Plus
Dsim\GD22291-PA 709 GD22291-PA 369..690 324..649 278 29.6 Plus
Dsim\GD25478-PA 511 GD25478-PA 216..475 333..587 260 27.9 Plus
Dsim\GD18692-PA 495 GD18692-PA 219..484 339..595 253 26.7 Plus
Dsim\GD25479-PA 517 GD25479-PA 215..475 333..589 237 29.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 03:25:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14760-PA 679 GJ14760-PA 46..679 52..676 2165 68.5 Plus
Dvir\GJ12492-PA 541 GJ12492-PA 254..505 374..628 328 32.6 Plus
Dvir\GJ12490-PA 851 GJ12490-PA 546..818 337..602 267 28.2 Plus
Dvir\GJ23561-PA 467 GJ23561-PA 198..460 338..589 235 23.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 03:25:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17202-PA 687 GK17202-PA 42..651 57..650 2026 65.3 Plus
Dwil\GK20999-PA 574 GK20999-PA 245..557 329..654 344 30.1 Plus
Dwil\GK12065-PA 524 GK12065-PA 85..510 194..619 319 25.3 Plus
Dwil\GK25390-PA 525 GK25390-PA 74..511 183..619 293 25 Plus
Dwil\GK20982-PA 518 GK20982-PA 221..497 338..607 259 27.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:25:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17283-PA 685 GE17283-PA 1..685 1..676 3030 89.4 Plus
Dyak\mth2-PA 660 GE21027-PA 222..558 258..613 359 28 Plus
Dyak\GE14193-PA 492 GE14193-PA 245..487 363..589 279 31.9 Plus
Dyak\GE14191-PA 511 GE14191-PA 216..476 333..588 248 28.1 Plus
Dyak\GE26035-PA 485 GE26035-PA 219..484 339..595 243 26.7 Plus

RE13854.hyp Sequence

Translation from 571 to 2601

> RE13854.hyp
MDRSRSSRAASSNQFIRPCGLLTTVILLQTLVSMSLAIEEMSPPPAAPPR
PSPPPTVKLNKCCHSGEYLNDGTCIAGSEALWLPMVYLVQQQRFFEPHGA
SPRFLKFLPNTRPTCRKDQTTEIFRSRGANVMLFPNGTLYVRERALMVQP
SDYCVDWEVAVVCLNDSQPINALEDPDYAANPLVQQEPPKASLRLSKCCG
KWGSYNTQLQNCDLQPNHQAAVDGLLRLSPQLPEGSYQTSYGLPDCGQPG
GYSIAGDWQDAKLDRNTAMLQLPHKNLSAGQYCLEHTQREGEVKIIACQH
LFSSAAGAGIHDGSIGGTIEQANGQNLQKAVLTGGILVSIVFLSATLVAG
FLLPAVHHALHWRCQICYVTCLLFGKILLAIEELSSSLQPGSAACHTLAI
TMQFFFLAAFFWLNTMCFNIWWTFRDFRPSSLERNQEALRRYLYSLYAWG
GPLLITFVAACVDQLPETTLLRPGFGQLYCWFDNRNLSIFAYFYGPIGLL
LCANIALFVSTTHQLTCGLWKRDDVKSSSEKSALGRVCLKLVVVMGVTWI
ADILSWLVGGPHGVWFFTDLINALQGVFIFIVVGCQPQVWTACRRIFCPR
LRHDITNTTNGVQHSSSSQGLPSMAGGTEITQNTTTTTTTTNTTATHMPS
NPAEDEVPEKAPIAPVAPIVKMETIC*

RE13854.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:14:14
Subject Length Description Subject Range Query Range Score Percent Strand
mthl1-PB 676 CG4521-PB 1..676 1..676 3626 100 Plus
mthl1-PA 676 CG4521-PA 1..676 1..676 3626 100 Plus
mthl10-PG 575 CG17061-PG 189..546 257..645 353 26.5 Plus
mthl10-PF 575 CG17061-PF 189..546 257..645 353 26.5 Plus
mthl10-PE 575 CG17061-PE 189..546 257..645 353 26.5 Plus