BDGP Sequence Production Resources |
Search the DGRC for RE14108
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 141 |
Well: | 8 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Taz-RA |
Protein status: | RE14108.pep: gold |
Preliminary Size: | 2066 |
Sequenced Size: | 1714 |
Gene | Date | Evidence |
---|---|---|
CG8766 | 2001-12-14 | Blastp of sequenced clone |
CG8766 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8766 | 2003-01-01 | Sim4 clustering to Release 3 |
tafazzin | 2008-04-29 | Release 5.5 accounting |
tafazzin | 2008-08-15 | Release 5.9 accounting |
tafazzin | 2008-12-18 | 5.12 accounting |
1714 bp (1714 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071059
> RE14108.complete AAAAATGTCCAAACATCAGTTGGATGTAAATGGCAAAAAACAGCTGTTTC AGATTGGTTTATCCTCAAATTTCTAGTTTCTGTAGATTCTATTGGCCTTG GAACTTTCGCCGCTCCCCACCACAATAACGCCCCCTTCAGACATGCGCCA AGTGAACACGGCGCCTCCTGCCCGTACGCCCATGAGATTGCTGCTGAGGT GAAGAAGTGGCGGTTGGGTGAAGAAGCAAGCAGTGCGCGCGTCCCAAATT GCAAAGTGATTTTTATTCGGCCCACAAAAGCCGGTTATGTAAAGACCGTA TAGGCCAAATATCTACACACATATCGTACTCGTTAAATTAAGAACTTGTA GAAATGTTTATGGTCGTGTGTTCCAATTTAAGGCGTCCCGGGCACGTGGG CGCCGCATCTGCAGCGCGAAATATAAACTGGCTGATCAGCGAGGGATATA CACCGCCGATCCGGGCAATGGCGCGGCCATACGTCCAAGCTCCGGAGGCG CGGCCAGTGCCCGATGAGCGCTATCCGGGCAGCCAGCAGGATAGGAAGGA TATCGCCACCCAGACTGTGCGGAGCAGCAAGCCCAAAGACCTGCGACCGC CTTCGCCGCCGACGCCGTCCCAGACCCTAAACTCCTCTTCCCTTCCGCCC CCAATGTCCGACCAGGATGCTGATCCCTCCCTGGATGTGCCCACCGGCGT GGCGATGCCCTACAACATCGACTGGATATTCCCTAGGCTGAGAAACCCCT CGAAGTTCTGGTACGTGGTCAGCCAGTTCGTCGTCTCCGCCGTTGGAATC TTCAGCAAGGTTGTGCTGATGTTTTTGAATAAACCCCGCGTCTATAACAG GGAGCGACTGATCCAGCTGATAACGAAGCGACCCAAGGGCATTCCCCTGG TCACCGTGTCCAACCACTACTCCTGCTTCGACGATCCTGGGCTGTGGGGC TGCCTTCCCCTGGGAATTGTCTGCAATACCTATAAAATTCGTTGGTCAAT GGCCGCTCACGACATTTGCTTCACTAACAAGCTGCACTCGCTCTTCTTCA TGTTTGGCAAGTGCATACCTGTTGTGCGTGGCATCGGTGTCTACCAGGAT GCCATCAACCTGTGCATCGAGAAGGCCGCACTGGGCCATTGGATCCATGT GTTTCCCGAAGGTAAGGTGAACATGGATAAGGAGGAGCTGCGTCTCAAGT GGGGCGTGGGCAGGATCATCTACGAGTCGCCAAAGATCCCCATAATTCTG CCCATGTGGCACGAGGGCATGGACGATCTGTTGCCCAATGTGGAGCCCTA TGTGATACAGCGTGGTAAGCAGGTGACGCTGAATGTTGGCCAGCCATTGG ACCTCAACGACTTTATTCTGGACCTAAAAAAACGACAAGTACCGGAGCCA ACGGCGCGGAAGCTCATTACAGACAAAATCCAGGAAGCCTTTCGGGACTT GCGGGCGGAGACAGAGAAATTGCACAGAGAGCGCAACTAGAACGTGATCA TGGATGAGCATAGACATTTGTAATAATATTTATTTGTATAGTATTAAGCC TAAAATGAACCCTCGAAGCCCTTTTGATCCATTTATTATAATTATAATTA TTTCCGTGTATTGCGACTAGTTCTTCAAGATGTATTTGCTGGATAGGAAC ATTAAGTAAATCAGTGTGCATTATTAGTATAAATATACAATTGAAACGAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Taz-RA | 1775 | Taz-RA | 1..1696 | 2..1697 | 8480 | 100 | Plus |
Taz.a | 1779 | Taz.a | 1..1445 | 2..1446 | 7225 | 100 | Plus |
Taz.c | 1374 | Taz.c | 70..1040 | 476..1446 | 4855 | 100 | Plus |
Taz.a | 1779 | Taz.a | 1451..1702 | 1446..1697 | 1260 | 100 | Plus |
Taz.c | 1374 | Taz.c | 1046..1297 | 1446..1697 | 1260 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 8643141..8643615 | 476..2 | 2345 | 99.6 | Minus |
chr2R | 21145070 | chr2R | 8640631..8641021 | 1446..1056 | 1955 | 100 | Minus |
chr2R | 21145070 | chr2R | 8641612..8641955 | 819..476 | 1675 | 99.1 | Minus |
chr2R | 21145070 | chr2R | 8640306..8640558 | 1697..1445 | 1265 | 100 | Minus |
chr2R | 21145070 | chr2R | 8641094..8641331 | 1057..820 | 1190 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 12755936..12756410 | 476..2 | 2375 | 100 | Minus |
2R | 25286936 | 2R | 12753427..12753817 | 1446..1056 | 1955 | 100 | Minus |
2R | 25286936 | 2R | 12754408..12754751 | 819..476 | 1720 | 100 | Minus |
2R | 25286936 | 2R | 12753102..12753354 | 1697..1445 | 1265 | 100 | Minus |
2R | 25286936 | 2R | 12753890..12754127 | 1057..820 | 1190 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12757135..12757609 | 476..2 | 2375 | 100 | Minus |
2R | 25260384 | 2R | 12754626..12755016 | 1446..1056 | 1955 | 100 | Minus |
2R | 25260384 | 2R | 12755607..12755950 | 819..476 | 1720 | 100 | Minus |
2R | 25260384 | 2R | 12754301..12754553 | 1697..1445 | 1265 | 100 | Minus |
2R | 25260384 | 2R | 12755089..12755326 | 1057..820 | 1190 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 8640632..8641020 | 1057..1445 | 100 | <- | Minus |
chr2R | 8641095..8641331 | 820..1056 | 100 | <- | Minus |
chr2R | 8641612..8641954 | 477..819 | 99 | <- | Minus |
chr2R | 8643141..8643615 | 1..476 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tafazzin-RA | 1..1137 | 354..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taz-RA | 1..1137 | 354..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taz-RA | 1..1137 | 354..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tafazzin-RA | 1..1137 | 354..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taz-RA | 1..1137 | 354..1490 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tafazzin-RA | 1..1696 | 2..1698 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taz-RA | 1..1696 | 2..1698 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taz-RA | 4..1700 | 1..1698 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tafazzin-RA | 1..1696 | 2..1698 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Taz-RA | 4..1700 | 1..1698 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12753101..12753353 | 1446..1698 | 99 | <- | Minus |
2R | 12753428..12753816 | 1057..1445 | 100 | <- | Minus |
2R | 12753891..12754127 | 820..1056 | 100 | <- | Minus |
2R | 12754408..12754750 | 477..819 | 100 | <- | Minus |
2R | 12755936..12756410 | 1..476 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12753101..12753353 | 1446..1698 | 99 | <- | Minus |
2R | 12753428..12753816 | 1057..1445 | 100 | <- | Minus |
2R | 12753891..12754127 | 820..1056 | 100 | <- | Minus |
2R | 12754408..12754750 | 477..819 | 100 | <- | Minus |
2R | 12755936..12756410 | 1..476 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12753101..12753353 | 1446..1698 | 99 | <- | Minus |
2R | 12753428..12753816 | 1057..1445 | 100 | <- | Minus |
2R | 12753891..12754127 | 820..1056 | 100 | <- | Minus |
2R | 12754408..12754750 | 477..819 | 100 | <- | Minus |
2R | 12755936..12756410 | 1..476 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 8640606..8640858 | 1446..1698 | 99 | <- | Minus |
arm_2R | 8640933..8641321 | 1057..1445 | 100 | <- | Minus |
arm_2R | 8641396..8641632 | 820..1056 | 100 | <- | Minus |
arm_2R | 8641913..8642255 | 477..819 | 100 | <- | Minus |
arm_2R | 8643441..8643915 | 1..476 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12754300..12754552 | 1446..1698 | 99 | <- | Minus |
2R | 12754627..12755015 | 1057..1445 | 100 | <- | Minus |
2R | 12755090..12755326 | 820..1056 | 100 | <- | Minus |
2R | 12755607..12755949 | 477..819 | 100 | <- | Minus |
2R | 12757135..12757609 | 1..476 | 99 | Minus |
Translation from 353 to 1489
> RE14108.pep MFMVVCSNLRRPGHVGAASAARNINWLISEGYTPPIRAMARPYVQAPEAR PVPDERYPGSQQDRKDIATQTVRSSKPKDLRPPSPPTPSQTLNSSSLPPP MSDQDADPSLDVPTGVAMPYNIDWIFPRLRNPSKFWYVVSQFVVSAVGIF SKVVLMFLNKPRVYNRERLIQLITKRPKGIPLVTVSNHYSCFDDPGLWGC LPLGIVCNTYKIRWSMAAHDICFTNKLHSLFFMFGKCIPVVRGIGVYQDA INLCIEKAALGHWIHVFPEGKVNMDKEELRLKWGVGRIIYESPKIPIILP MWHEGMDDLLPNVEPYVIQRGKQVTLNVGQPLDLNDFILDLKKRQVPEPT ARKLITDKIQEAFRDLRAETEKLHRERN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13095-PA | 378 | GF13095-PA | 1..377 | 3..377 | 1337 | 68.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22553-PA | 378 | GG22553-PA | 1..378 | 1..378 | 1855 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19953-PA | 340 | GH19953-PA | 9..339 | 40..377 | 1220 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Taz-PA | 378 | CG8766-PA | 1..378 | 1..378 | 2027 | 100 | Plus |
Taz-PC | 338 | CG8766-PC | 2..338 | 42..378 | 1811 | 100 | Plus |
Taz-PD | 278 | CG8766-PD | 1..278 | 101..378 | 1496 | 100 | Plus |
Taz-PB | 278 | CG8766-PB | 1..278 | 101..378 | 1496 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19910-PA | 360 | GI19910-PA | 9..359 | 40..377 | 1166 | 62.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17727-PA | 388 | GL17727-PA | 1..387 | 1..378 | 1242 | 61.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21304-PB | 390 | GA21304-PB | 1..389 | 1..378 | 1256 | 62.7 | Plus |
Dpse\GA21304-PC | 353 | GA21304-PC | 14..352 | 43..378 | 1214 | 66.6 | Plus |
Dpse\GA21304-PA | 277 | GA21304-PA | 3..276 | 105..378 | 1187 | 75.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20337-PA | 378 | GM20337-PA | 1..378 | 1..378 | 1960 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25815-PA | 278 | GD25815-PA | 1..278 | 101..378 | 1466 | 97.5 | Plus |
Dsim\GD25814-PA | 91 | GD25814-PA | 1..65 | 1..65 | 315 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15079-PA | 352 | GJ15079-PA | 4..351 | 35..377 | 1162 | 60.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21686-PA | 379 | GK21686-PA | 1..378 | 1..377 | 1208 | 61.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13423-PA | 378 | GE13423-PA | 1..378 | 1..378 | 1832 | 91.5 | Plus |
Translation from 353 to 1489
> RE14108.hyp MFMVVCSNLRRPGHVGAASAARNINWLISEGYTPPIRAMARPYVQAPEAR PVPDERYPGSQQDRKDIATQTVRSSKPKDLRPPSPPTPSQTLNSSSLPPP MSDQDADPSLDVPTGVAMPYNIDWIFPRLRNPSKFWYVVSQFVVSAVGIF SKVVLMFLNKPRVYNRERLIQLITKRPKGIPLVTVSNHYSCFDDPGLWGC LPLGIVCNTYKIRWSMAAHDICFTNKLHSLFFMFGKCIPVVRGIGVYQDA INLCIEKAALGHWIHVFPEGKVNMDKEELRLKWGVGRIIYESPKIPIILP MWHEGMDDLLPNVEPYVIQRGKQVTLNVGQPLDLNDFILDLKKRQVPEPT ARKLITDKIQEAFRDLRAETEKLHRERN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Taz-PA | 378 | CG8766-PA | 1..378 | 1..378 | 2027 | 100 | Plus |
Taz-PC | 338 | CG8766-PC | 2..338 | 42..378 | 1811 | 100 | Plus |
Taz-PD | 278 | CG8766-PD | 1..278 | 101..378 | 1496 | 100 | Plus |
Taz-PB | 278 | CG8766-PB | 1..278 | 101..378 | 1496 | 100 | Plus |