BDGP Sequence Production Resources |
Search the DGRC for RE14150
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 141 |
Well: | 50 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG2556-RA |
Protein status: | RE14150.pep: gold |
Sequenced Size: | 2288 |
Gene | Date | Evidence |
---|---|---|
CG2556 | 2007-09-25 | DGC5 pick |
CG2556 | 2008-04-29 | Release 5.5 accounting |
CG2556 | 2008-04-29 | Picked prior to 5.5 |
CG2556 | 2008-08-15 | Release 5.9 accounting |
CG2556 | 2008-12-18 | 5.12 accounting |
2288 bp assembled on 2007-11-15
GenBank Submission: BT031287
> RE14150.complete AGTTGTGTTTTCGATTGCTCTGCGTGCTGGTCGTTCCTCCAAGTCTGCAA TTCTGCACAATTTTACAATTATTCTTCGCGCGTACTCCAACTCCCCATTC ATCCGTCTGTTTGTTTGGTTGTTTCCTTTCTTCGTTGCACCTTTTGCGCG CGCGCAACCGCCGATAAACAGAGAAAAGAAGAAAAGGAGAAATTCTGCAA CAAACACTGGAAGTGCAATTTTAAGTAGACGATCCCGTGAATGTTTTCCA GTTGAAACATTTACTATCGTTTCATTTTTTTTTTAAATTTTGTTCTGTTA AGTGTTGAAAAAAAAGTTTTTGCAGCCACAGCAAACTAAAACTTTTCATC AAAATGCAGCAGAAAGTCGAAGAGAAAATCGATCCCCTGACACGCATTCA GGAGGAGATCAAGGAGGTAGTGCGGCGCGAGGAGGAGTACCGCCAGCTGG CCACACTGTCGTCCAGCGCCTCGATCACTTCCGCTTCGCCGGATTTCGAG ACATACACGGTTAATAGTAACTTTGAGCCGAAACTGCAGCAGGATGATGA GCACGATCTGGTCGAAAGTCCAGATCAGGACCAGGGCATGCTCGTTACCG CCCAGCCGGCGGCCGTGCAGACCACCTCGCTCCTGCTGCCCATCGACGAG CTGTCCAACACACCATCGCTGGCCTCCAGTGTGAATAGCGCCAAGGAGGA GAGCCTCGATGGCCAGCACTCGGATGATTCGGGCATTTCGGCCTCCTCGC AGAGCAACATCCTCATCACTGGGATCACCACGAATGTGGCCAAGCAGCAG CCACTCAAACTGACCGTGGTGACGCGTCAGGAGCAGCGTTACATTGGGCC CAACTGCTATAATCTGACACCTGAACCGCCACAGCAGAAGCTGATCACCC GCACCATATCCACGCCCCAGCTGAGTGGTCTGCCCCAGAAGCGGCAGTTT GCCTTCGGTGGCGCCACCAAGGGTGTGATGCAGCGCTTCATTGCCTCGCA TGGCAAGTTGGGCAACACTAGCCCGCTGCCGGCTGCATCTCCAATGACGT TGTCCCTGGGCGCCGCCAATGGTAATGGCGGCCTAAATGTCAATGGCCAG ATCAACAATATCAGCAGCAGCAACAATAACAACAACAACAACAACAACAC CCTCAAGCTGAACACTCGCACAGCCATGGCTTTCCTGGAGTCTGGAGGTT CCACGGGCGGCATCAACTCGTCATCGGCGGCCCTATCGTCGGCGGCTATC GAACGCGACTCGGAAGGCAGGCCCCTGCGACGAGGATATGTCCCCGTTGA GCAGAAGATTCAGCGTGAGCTGCAGGATCTGAAGTCACGCGAATCGGAAT TGAAGCGTCTGCGCAAGATCAACAGGCAGAACACACTGAAGGCCTCCCTG GACAAGCTGCAACTCAGCACAGATGATGAGGCCGATGCAGATGATGATGA TGAGGACTCCGAGGTGGAGCACTGCTATGGGCCCGGAAAACTGCGCAATG CCCAGTCCACACAGGAACTTGATAGGAATGGAAACGAGCAGGACATCGTT CACAAGCCATCGGGTAATCGCAGTCTGAACGCAACCGCCTATATAGCCAA TGGAATCAGCAATGGCAATGGCAACGGCATGCGTCCGGCGATGTCGCTGG CCCAGCTCTGCGATCTGACGCCGGAGGAGGCGCCCTCATCGCGTGGACTC ATCGCCCAGTGGGAGAATCTGATCAAGAAGAACGCCGAGGTGGGAACGGT CGAGGCGATCATCTAAAGAATGTGGGTCGGGTACCCTTGCAGAAAACGGC AAAACAAAAAAGATGAAATACAAAAACATACACACCAACGACCTGGTGCA GAGCAGACCAAATTATTTAATATATAGTGTCCACACTAACACACTTGATC CTCTCACTTCTCCGAGTCCACGTCCACGTCCACGTCAACGTCCAGGTCCT TCTCCTTCTTCTCCCTCTTCACCTGCGAAAGCTGCTTATCAACGAATTAA TCTTAATGCCAATCAATGGGAATTGAAATTATAACGAAATTGAATTGCCT GTACTTAAAGCGATTTATATGTGTTATTTGTAATGTGTACGTGAACTGTT CGAGAAATCTATTGTATATAAATAATTCTTCGTGTTTCCAGTGCGAGTAC AGTCGACTTGCTTATAATTTATTACAAATCAACTTTATATATACCATATA TGAAAGTATATAAACAAAATACTATATGTACGAAATCAATATGAGAAAAC GATTAAAAAAAATAAAAAAAATAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2556-RA | 2415 | CG2556-RA | 79..2351 | 1..2273 | 11365 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 12405371..12406404 | 373..1409 | 5075 | 99.5 | Plus |
chrX | 22417052 | chrX | 12406710..12407436 | 1531..2271 | 3395 | 97.8 | Plus |
chrX | 22417052 | chrX | 12388191..12388564 | 1..374 | 1840 | 99.5 | Plus |
chrX | 22417052 | chrX | 12406531..12406653 | 1409..1531 | 615 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 12514482..12515518 | 373..1409 | 5185 | 100 | Plus |
X | 23542271 | X | 12515824..12516566 | 1531..2273 | 3715 | 100 | Plus |
X | 23542271 | X | 12497220..12497593 | 1..374 | 1870 | 100 | Plus |
X | 23542271 | X | 12515645..12515767 | 1409..1531 | 615 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 12522580..12523616 | 373..1409 | 5185 | 100 | Plus |
X | 23527363 | X | 12523922..12524664 | 1531..2273 | 3715 | 100 | Plus |
X | 23527363 | X | 12505318..12505691 | 1..374 | 1870 | 100 | Plus |
X | 23527363 | X | 12523743..12523865 | 1409..1531 | 615 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 12388191..12388564 | 1..374 | 99 | -> | Plus |
chrX | 12405373..12406403 | 375..1408 | 95 | -> | Plus |
chrX | 12406531..12406653 | 1409..1531 | 100 | -> | Plus |
chrX | 12406711..12407416 | 1532..2254 | 94 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2556-RA | 1..1413 | 354..1766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2556-RA | 1..1413 | 354..1766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2556-RA | 1..1413 | 354..1766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2556-RA | 1..1413 | 354..1766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2556-RA | 1..1413 | 354..1766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2556-RA | 60..2313 | 1..2254 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2556-RA | 60..2313 | 1..2254 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2556-RA | 33..2286 | 1..2254 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2556-RA | 60..2313 | 1..2254 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2556-RA | 33..2286 | 1..2254 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12497220..12497593 | 1..374 | 100 | -> | Plus |
X | 12514484..12515517 | 375..1408 | 100 | -> | Plus |
X | 12515645..12515767 | 1409..1531 | 100 | -> | Plus |
X | 12515825..12516547 | 1532..2254 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12497220..12497593 | 1..374 | 100 | -> | Plus |
X | 12514484..12515517 | 375..1408 | 100 | -> | Plus |
X | 12515645..12515767 | 1409..1531 | 100 | -> | Plus |
X | 12515825..12516547 | 1532..2254 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12497220..12497593 | 1..374 | 100 | -> | Plus |
X | 12514484..12515517 | 375..1408 | 100 | -> | Plus |
X | 12515645..12515767 | 1409..1531 | 100 | -> | Plus |
X | 12515825..12516547 | 1532..2254 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 12391253..12391626 | 1..374 | 100 | -> | Plus |
arm_X | 12408517..12409550 | 375..1408 | 100 | -> | Plus |
arm_X | 12409678..12409800 | 1409..1531 | 100 | -> | Plus |
arm_X | 12409858..12410580 | 1532..2254 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12505318..12505691 | 1..374 | 100 | -> | Plus |
X | 12522582..12523615 | 375..1408 | 100 | -> | Plus |
X | 12523743..12523865 | 1409..1531 | 100 | -> | Plus |
X | 12523923..12524645 | 1532..2254 | 100 | Plus |
Translation from 353 to 1765
> RE14150.hyp MQQKVEEKIDPLTRIQEEIKEVVRREEEYRQLATLSSSASITSASPDFET YTVNSNFEPKLQQDDEHDLVESPDQDQGMLVTAQPAAVQTTSLLLPIDEL SNTPSLASSVNSAKEESLDGQHSDDSGISASSQSNILITGITTNVAKQQP LKLTVVTRQEQRYIGPNCYNLTPEPPQQKLITRTISTPQLSGLPQKRQFA FGGATKGVMQRFIASHGKLGNTSPLPAASPMTLSLGAANGNGGLNVNGQI NNISSSNNNNNNNNNTLKLNTRTAMAFLESGGSTGGINSSSAALSSAAIE RDSEGRPLRRGYVPVEQKIQRELQDLKSRESELKRLRKINRQNTLKASLD KLQLSTDDEADADDDDEDSEVEHCYGPGKLRNAQSTQELDRNGNEQDIVH KPSGNRSLNATAYIANGISNGNGNGMRPAMSLAQLCDLTPEEAPSSRGLI AQWENLIKKNAEVGTVEAII*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2556-PA | 470 | CG2556-PA | 1..470 | 1..470 | 2371 | 100 | Plus |
Translation from 353 to 1765
> RE14150.pep MQQKVEEKIDPLTRIQEEIKEVVRREEEYRQLATLSSSASITSASPDFET YTVNSNFEPKLQQDDEHDLVESPDQDQGMLVTAQPAAVQTTSLLLPIDEL SNTPSLASSVNSAKEESLDGQHSDDSGISASSQSNILITGITTNVAKQQP LKLTVVTRQEQRYIGPNCYNLTPEPPQQKLITRTISTPQLSGLPQKRQFA FGGATKGVMQRFIASHGKLGNTSPLPAASPMTLSLGAANGNGGLNVNGQI NNISSSNNNNNNNNNTLKLNTRTAMAFLESGGSTGGINSSSAALSSAAIE RDSEGRPLRRGYVPVEQKIQRELQDLKSRESELKRLRKINRQNTLKASLD KLQLSTDDEADADDDDEDSEVEHCYGPGKLRNAQSTQELDRNGNEQDIVH KPSGNRSLNATAYIANGISNGNGNGMRPAMSLAQLCDLTPEEAPSSRGLI AQWENLIKKNAEVGTVEAII*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21927-PA | 453 | GF21927-PA | 1..453 | 1..470 | 1553 | 75.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17725-PA | 472 | GG17725-PA | 1..472 | 1..470 | 2071 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24126-PA | 473 | GH24126-PA | 1..473 | 1..470 | 1208 | 60 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2556-PA | 470 | CG2556-PA | 1..470 | 1..470 | 2371 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25336-PA | 344 | GL25336-PA | 63..256 | 7..184 | 571 | 69.6 | Plus |
Dper\GL25336-PA | 344 | GL25336-PA | 261..344 | 396..470 | 203 | 58.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22956-PA | 468 | GA22956-PA | 1..468 | 1..470 | 1379 | 66.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11568-PA | 452 | GM11568-PA | 200..442 | 6..248 | 1268 | 97.5 | Plus |
Dsec\GM11569-PA | 194 | GM11569-PA | 1..194 | 275..470 | 979 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17083-PA | 471 | GD17083-PA | 20..471 | 18..470 | 2256 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16757-PA | 390 | GJ16757-PA | 1..390 | 1..470 | 759 | 46.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16499-PA | 483 | GK16499-PA | 1..483 | 1..470 | 1284 | 63.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17015-PA | 478 | GE17015-PA | 1..478 | 1..470 | 2008 | 92.7 | Plus |