![]() | BDGP Sequence Production Resources |
Search the DGRC for RE14181
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 141 |
Well: | 81 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Nelf-E-RA |
Protein status: | RE14181.pep: gold |
Preliminary Size: | 1547 |
Sequenced Size: | 1237 |
Gene | Date | Evidence |
---|---|---|
CG5994 | 2001-12-14 | Blastp of sequenced clone |
CG5994 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5994 | 2003-01-01 | Sim4 clustering to Release 3 |
Nelf-E | 2008-04-29 | Release 5.5 accounting |
Nelf-E | 2008-08-15 | Release 5.9 accounting |
Nelf-E | 2008-12-18 | 5.12 accounting |
1237 bp (1237 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071061
> RE14181.complete ATCAACTGTTACAGTCACACTAAGCCAATTCGATAGATTTCGATAGTAAA AATAAACATTTTGGAATAACATAATTACTTTTGTAGAAGTTACTTTTTAC GGGGTTAATTTCAAGCAGACATTTTCCCAACATGGTTTACATACACTTCC CCAACAATTTAACCGAAGAGGAGCAAATGCTGCAGGCCAAGTATCAGAAA CTCAAGAAAAAGAAAAAGGCACTGCAAGCGCACAAGGCGCCCAAGCCGGA GCCGGAGAGCTCCTTGACCTTGAAGCGTCCCACGGATGCGCGAGATGCCC GTGAAGTGGCCAGGAAACTAATCAAAAGCGGCGCCATTCCCGCCATCCAG AAGCAGACCAAGCAAGATCAAACCTCCTTCAAGCGGCCCAAAGGACAGGA AAGAGCCAAGCGCTCCACCTCGGAAACCACTGTTGCCTCCTACCAGCCCT TTTCGTCTACGCAGAACGACGTGGCCCAGGAGACGATCATTAGTGAGATC ATTAAGGAGGAGCCGCGTCGACAGAATCTCTACCAACACTTCGCCACCGA GCGGGATCGAGAGGAGCGCGGCATGCCCGAGAAGGTGCCCATGGACACAG CGCAGCCAGAGAAGCCACGGGCCGGCAATACCATCTTCGTGTCCGGCAAC AAGGTCACCGAGGATTTCTTAAAAAAGACATTCAACGACTACGGCACCAT TGTCAATGTCTCCATGGAGATCGAAAAGAGTCGCGGCTTTGTTTCCTTCG CCAAACCCGAGTCGGCAGATCGCGCCATTGCGGAGATTCATGGCAAGAAT GTGAATGGCATCAACTTGCAGGTGCAGTTGGCTAGACGCCAGCCCCAGAT TGAGCCCATTAACGATGCCTCCTCGTCGGCAGTCTGGTCATCTATTGCCG CCAGCAAATCACAAAAGGGTAGCCACAAGGACCACCGCGAGATGGTTCAA TACGATGAAGACTTCTTGCTCTAGAGCGCAATAATTAGTTTCTACGTTTA GCTTTCTACTTACTTTATCCCTTAGTAACAGAACACATTTCAGTTTATTT TAAATAATTTTGCTTTATTGAAATACGCTTCTATATATATGTTCACTTTC TGGCTAAGTACTCGCATTTCAAGTTATAACGTTCAAATGAATTCAATGAA AAAGATTGTATGTTTTGTATATTAATTCCTACGTTTTGATCTAAATTAAA CAACAATATGTTTAACAATAGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 8592113..8592632 | 730..211 | 2450 | 98.1 | Minus |
chr3L | 24539361 | chr3L | 8591470..8591793 | 1219..897 | 1570 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 8592688..8592896 | 212..1 | 965 | 98.1 | Minus |
chr3L | 24539361 | chr3L | 8591857..8592025 | 897..729 | 815 | 98.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 8600087..8600606 | 730..211 | 2600 | 100 | Minus |
3L | 28110227 | 3L | 8599440..8599767 | 1223..897 | 1575 | 99.4 | Minus |
3L | 28110227 | 3L | 8600663..8600874 | 212..1 | 1060 | 100 | Minus |
3L | 28110227 | 3L | 8599831..8599999 | 897..729 | 845 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 8593187..8593706 | 730..211 | 2600 | 100 | Minus |
3L | 28103327 | 3L | 8592540..8592867 | 1223..897 | 1585 | 99.3 | Minus |
3L | 28103327 | 3L | 8593763..8593974 | 212..1 | 1060 | 100 | Minus |
3L | 28103327 | 3L | 8592931..8593099 | 897..729 | 845 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\Vege | 884 | Dwil\Vege VEGE 884bp Derived from AF518730. | 53..101 | 85..36 | 112 | 72 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 8591468..8591792 | 898..1221 | 99 | <- | Minus |
chr3L | 8591857..8592023 | 731..897 | 98 | <- | Minus |
chr3L | 8592113..8592630 | 213..730 | 98 | <- | Minus |
chr3L | 8592688..8592896 | 1..212 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nelf-E-RA | 1..843 | 132..974 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nelf-E-RA | 1..843 | 132..974 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nelf-E-RA | 1..843 | 132..974 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nelf-E-RA | 1..843 | 132..974 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nelf-E-RA | 1..843 | 132..974 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nelf-E-RA | 1..1222 | 1..1221 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nelf-E-RA | 1..1222 | 1..1221 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nelf-E-RA | 6..1227 | 1..1221 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nelf-E-RA | 1..1222 | 1..1221 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nelf-E-RA | 6..1227 | 1..1221 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8599442..8599766 | 898..1221 | 99 | <- | Minus |
3L | 8599831..8599997 | 731..897 | 100 | <- | Minus |
3L | 8600087..8600604 | 213..730 | 100 | <- | Minus |
3L | 8600663..8600874 | 1..212 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8599442..8599766 | 898..1221 | 99 | <- | Minus |
3L | 8599831..8599997 | 731..897 | 100 | <- | Minus |
3L | 8600087..8600604 | 213..730 | 100 | <- | Minus |
3L | 8600663..8600874 | 1..212 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8599442..8599766 | 898..1221 | 99 | <- | Minus |
3L | 8599831..8599997 | 731..897 | 100 | <- | Minus |
3L | 8600087..8600604 | 213..730 | 100 | <- | Minus |
3L | 8600663..8600874 | 1..212 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 8592542..8592866 | 898..1221 | 99 | <- | Minus |
arm_3L | 8592931..8593097 | 731..897 | 100 | <- | Minus |
arm_3L | 8593187..8593704 | 213..730 | 100 | <- | Minus |
arm_3L | 8593763..8593974 | 1..212 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8592542..8592866 | 898..1221 | 99 | <- | Minus |
3L | 8592931..8593097 | 731..897 | 100 | <- | Minus |
3L | 8593187..8593704 | 213..730 | 100 | <- | Minus |
3L | 8593763..8593974 | 1..212 | 100 | Minus |
Translation from 131 to 973
> RE14181.pep MVYIHFPNNLTEEEQMLQAKYQKLKKKKKALQAHKAPKPEPESSLTLKRP TDARDAREVARKLIKSGAIPAIQKQTKQDQTSFKRPKGQERAKRSTSETT VASYQPFSSTQNDVAQETIISEIIKEEPRRQNLYQHFATERDREERGMPE KVPMDTAQPEKPRAGNTIFVSGNKVTEDFLKKTFNDYGTIVNVSMEIEKS RGFVSFAKPESADRAIAEIHGKNVNGINLQVQLARRQPQIEPINDASSSA VWSSIAASKSQKGSHKDHREMVQYDEDFLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10157-PA | 281 | GF10157-PA | 1..281 | 1..280 | 1430 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15071-PA | 280 | GG15071-PA | 1..280 | 1..280 | 1477 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16149-PA | 281 | GH16149-PA | 1..281 | 1..280 | 1214 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nelf-E-PA | 280 | CG5994-PA | 1..280 | 1..280 | 1422 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12420-PA | 281 | GI12420-PA | 1..280 | 1..279 | 1229 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10297-PA | 282 | GL10297-PA | 1..282 | 1..280 | 1223 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19284-PA | 282 | GA19284-PA | 1..282 | 1..280 | 1223 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24927-PA | 280 | GM24927-PA | 1..280 | 1..280 | 1484 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12975-PA | 418 | GD12975-PA | 255..418 | 117..280 | 886 | 100 | Plus |
Dsim\GD12975-PA | 418 | GD12975-PA | 1..88 | 1..88 | 431 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Nelf-E-PA | 281 | GJ12312-PA | 1..281 | 1..280 | 1215 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20547-PA | 279 | GK20547-PA | 1..279 | 1..280 | 1216 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21294-PA | 280 | GE21294-PA | 1..280 | 1..280 | 1479 | 99.3 | Plus |
Translation from 131 to 973
> RE14181.hyp MVYIHFPNNLTEEEQMLQAKYQKLKKKKKALQAHKAPKPEPESSLTLKRP TDARDAREVARKLIKSGAIPAIQKQTKQDQTSFKRPKGQERAKRSTSETT VASYQPFSSTQNDVAQETIISEIIKEEPRRQNLYQHFATERDREERGMPE KVPMDTAQPEKPRAGNTIFVSGNKVTEDFLKKTFNDYGTIVNVSMEIEKS RGFVSFAKPESADRAIAEIHGKNVNGINLQVQLARRQPQIEPINDASSSA VWSSIAASKSQKGSHKDHREMVQYDEDFLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nelf-E-PA | 280 | CG5994-PA | 1..280 | 1..280 | 1422 | 100 | Plus |