BDGP Sequence Production Resources |
Search the DGRC for RE14222
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 142 |
Well: | 22 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG11318-RA |
Protein status: | RE14222.pep: gold |
Preliminary Size: | 2325 |
Sequenced Size: | 2777 |
Gene | Date | Evidence |
---|---|---|
CG11318 | 2001-12-14 | Blastp of sequenced clone |
CG11318 | 2002-01-01 | Sim4 clustering to Release 2 |
CG11318 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11318 | 2008-04-29 | Release 5.5 accounting |
CG11318 | 2008-08-15 | Release 5.9 accounting |
CG11318 | 2008-12-18 | 5.12 accounting |
2777 bp (2777 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071063
> RE14222.complete AGTGTGCCGCGATATTTCAAGAACGTCGGACGTGAAAAGTACTATCTGCC AAAGAATTTGTAAACATTTTCGGAGAGCTGCAAACAGCTGTGGCACCTGA TTCATCGCCATGAATTTCAACTGGTGTGCTGGGCTCTTTGTGGTCTTGGC CTTGGTTTCGCCGATTTATTCCGCCTGCCCAAAGGAAAATCAAATGTGCT TGAGAAACGGAACGTTTCAGTACTGTGATGGAGAGGAACGTAATTCATCG GACGAACTTATGCAAACACATCTGGTTTACTGTACGTCCATGTTCTGCGA GCCGGAGGAGTTTCAGCACGACTACATAACGCGTAACCACGATCAAACAC CTCACCAGAACAAGTGGAAACGGGCTAGAATCGGCGAACGTGCCACCCTG CACGATGTTTGCCTTCTGCGAAACGGAATGCCGGTCACCAGGGAGTGCAG AGTGAAGGACAACCGAGCCAACTGGGAGTCCACCGAACACTGGGATCCCG TGGTGTGTTTGAGGCGATTCAGGGAGCACACGATCAGCGGTGACTTGAAT AGCCTGCATGACGACGTTCTCGAGGGCAGGAGGCGCACCAATGACACCCA GGGGCGTCGTGAGATGACTGGCATAATGAGGAACATGTTCCGACAGAGAG GTGGGAATCTTCTACCCGCCGATGTTCACATGACCGGACAAATGTTCGGC GCCCTGATGCAGCAGGACAAGGATGCCACGGTCAGTGTGGACTTGGTCAG TGTCTGCAAGGAGATAATGTCCTGCGACAGTAAGGTTCTTAGATTATCAG CTCAGCTCAACGCTACCAATTCCCTGCTCAGCCAGTTCGAAAGCTACATG GATGCTCTTCCGGAGCAACTGGTTCCCAAGGACAGATGCGGCAAGGTGGT GGCCAAGCCGACCAGTGATGAAGCAGAAACGGCCACTACTGGAGTGGAAA CGTACAACTTCTCAGATATCGGTGTCCAAGCTCTGATTACCGGCAATATC AGCGTGTTCTTCGCCAACCCCGAATGCGATCGCATAACTGGATTAGCTAT ATTCTCTGCGCCAGGGGATCAACGAAAGACTTCCGCCAGTGGCTTCTGGT ACCGCTTCATTCGATTCTCCGAAGACTTGGCTAAGGTCAAGGAGGAATCT AATCTGGAGACAGCTGCATTTTTGCCGGAGAATCTCTGGCGGCAAGTGAA AAGCAGGGGAGCAACCTATCTCATCTTTAAAGTCTATGCCCACGATGCTC TGTTCGTGGAAACCTCATTGCAACGCACTCGTAAGCCGCGCAGCAAAGTA ATCTCCATTTCAATACCAGGACTGAGAAGCAATTATCTCTCTCTGCCACT GCCCTTTCTTCTGCGTAATGAAAATCTTCGCAATCCGGATTCAAAGGCCT TTAGCATTGGGAGTGGATGCGGATATTGGAACTATGAAACCTGGTCAACT GAGGGAGTAAGCACTGAAAGCAGTTCGGACCTCTTGAAGGATGCCATCAT CGAGTGCCACACTAACCACCTCACACAGTTTGCATTCCTGGTGGGTGGAA GCTATCGAGCCAACGACCTTGGCGAGGAGATTCTAATTACTCCGATTAAT GAGAAAGTGCTGGACATTATCTCGATAGTGGGCTGCAGTCTTTCCCTTTT GGGTATACTGGGAATATTCCTCACTGCCGCACTCTTCAAAAGCTGGCGCA GTCAGGCCTCCACGAAGGTCTTACTGCACCTTTGCCTGGCTATGTGTCTC CAGATGATGCTCTTCGTGTTTCTCAATACAGATGATGTATCCGAAGCGCT TGTTGTGAATGGAAACACAGTTCGCTGTGTGGCTCTGGGCGCTGCCATGC AGTACTCCATTCTGGTTCTCTTCAGTTGGATGCTAATCATCGCCTTCCTG CAGTTCCAGCGTTACGTCACAGTTATCGGAATCGAGAGACCACCTCGCTA TATCCTGAAGGCCGCCATTGTGGCCTGGCTACTGCCCTTGGTCCCCACCC TGCTGGTGGCCCTTATAGATCCCGATTCGTACGTCCCCTCGGCTGCCCAA CTTTCCACGGACACTGGCATCTGCTATCCATCGGGCTATGGTCTCATTTT TGGGGTGGTGCTCCCTGTGACCTTGATTACTGTGTGCAACTTGGTGATAT TCGTGTATGTTTTCTACAGCATCTCGCACTCTTTGAGCCAGAGCATCCAT AAAAACGAAAAGAAAATGGTGGTTAAGCAGATCCGACTCTCCATAATGCT CTTCTTTTTGCTGGGTCTTACCTGGATCTTTGGAATATTCGCCTTCATGC AGGCAGGTGTGGCTTTTTCATACCTCTTCTGCATCACGGCCACTATGCAG GGATTTGTGATGTTCATTTACTTTGTCCTCTTGGACTCCACGAACCGTCG GCTGTGGGTGGGTCTGATTTGCCCCACCAAGATGGAGCTGGATGTCCAAA AGCGCACCACTGAGCTCCAGTCGATGACCACCTCATCCACCAACTACAAC AGCAGATCACATCAGTAGATATACTAAAATACGTATTCCCCGACGAACAA AGGTCCAGGACCAATGTATTAATAACGTTATATTTTATGCTAATTGATTG CCATTATGTATAGGTCCCTAAATTAAAATTTAAAAATTCTAATATAAAAT AAGACAATACTTCCCAGCGAGTCGATTTAATTAATACTAAATTTTTTATT TTCGCATGTAAGTCTCTGTCAGAAGCCAACTATTTAAAAATATATATCCC TTTTTGCCTCCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11318-RA | 2829 | CG11318-RA | 65..2827 | 1..2763 | 13800 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
1360 | 3409 | 1360 1360 3409bp | 3053..3117 | 2619..2683 | 118 | 64.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 26928766..26930198 | 1329..2761 | 95 | <- | Minus |
chr3R | 26930265..26931592 | 1..1328 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11318-RA | 1..2409 | 110..2518 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11318-RA | 1..2409 | 110..2518 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11318-RA | 1..2409 | 110..2518 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11318-RA | 1..2409 | 110..2518 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11318-RA | 1..2409 | 110..2518 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11318-RA | 1..2757 | 1..2757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11318-RA | 1..2757 | 1..2757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11318-RA | 4..2764 | 1..2761 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11318-RA | 1..2757 | 1..2757 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11318-RA | 4..2764 | 1..2761 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31106362..31107794 | 1329..2761 | 99 | <- | Minus |
3R | 31107861..31109188 | 1..1328 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31106362..31107794 | 1329..2761 | 99 | <- | Minus |
3R | 31107861..31109188 | 1..1328 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31106362..31107794 | 1329..2761 | 99 | <- | Minus |
3R | 31107861..31109188 | 1..1328 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 26932084..26933516 | 1329..2761 | 99 | <- | Minus |
arm_3R | 26933583..26934910 | 1..1328 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30847193..30848625 | 1329..2761 | 99 | <- | Minus |
3R | 30848692..30850019 | 1..1328 | 100 | Minus |
Translation from 109 to 2517
> RE14222.pep MNFNWCAGLFVVLALVSPIYSACPKENQMCLRNGTFQYCDGEERNSSDEL MQTHLVYCTSMFCEPEEFQHDYITRNHDQTPHQNKWKRARIGERATLHDV CLLRNGMPVTRECRVKDNRANWESTEHWDPVVCLRRFREHTISGDLNSLH DDVLEGRRRTNDTQGRREMTGIMRNMFRQRGGNLLPADVHMTGQMFGALM QQDKDATVSVDLVSVCKEIMSCDSKVLRLSAQLNATNSLLSQFESYMDAL PEQLVPKDRCGKVVAKPTSDEAETATTGVETYNFSDIGVQALITGNISVF FANPECDRITGLAIFSAPGDQRKTSASGFWYRFIRFSEDLAKVKEESNLE TAAFLPENLWRQVKSRGATYLIFKVYAHDALFVETSLQRTRKPRSKVISI SIPGLRSNYLSLPLPFLLRNENLRNPDSKAFSIGSGCGYWNYETWSTEGV STESSSDLLKDAIIECHTNHLTQFAFLVGGSYRANDLGEEILITPINEKV LDIISIVGCSLSLLGILGIFLTAALFKSWRSQASTKVLLHLCLAMCLQMM LFVFLNTDDVSEALVVNGNTVRCVALGAAMQYSILVLFSWMLIIAFLQFQ RYVTVIGIERPPRYILKAAIVAWLLPLVPTLLVALIDPDSYVPSAAQLST DTGICYPSGYGLIFGVVLPVTLITVCNLVIFVYVFYSISHSLSQSIHKNE KKMVVKQIRLSIMLFFLLGLTWIFGIFAFMQAGVAFSYLFCITATMQGFV MFIYFVLLDSTNRRLWVGLICPTKMELDVQKRTTELQSMTTSSTNYNSRS HQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16599-PA | 783 | GF16599-PA | 3..780 | 22..800 | 3319 | 78.6 | Plus |
Dana\GF16598-PA | 785 | GF16598-PA | 67..748 | 44..771 | 1294 | 38.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11888-PA | 802 | GG11888-PA | 1..802 | 1..802 | 3951 | 92.4 | Plus |
Dere\GG11886-PA | 755 | GG11886-PA | 7..754 | 5..798 | 1284 | 37.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13973-PA | 818 | GH13973-PA | 40..816 | 23..800 | 2917 | 67.9 | Plus |
Dgri\GH14343-PA | 763 | GH14343-PA | 49..756 | 62..795 | 1760 | 48.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11318-PA | 802 | CG11318-PA | 1..802 | 1..802 | 4179 | 100 | Plus |
CG15556-PC | 755 | CG15556-PC | 7..754 | 5..798 | 1346 | 37.4 | Plus |
CG15556-PB | 755 | CG15556-PB | 7..754 | 5..798 | 1346 | 37.4 | Plus |
CG15556-PA | 755 | CG15556-PA | 7..754 | 5..798 | 1346 | 37.4 | Plus |
CG43968-PA | 1026 | CG43968-PA | 587..1017 | 86..517 | 301 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22317-PA | 812 | GI22317-PA | 32..808 | 20..797 | 2865 | 67.9 | Plus |
Dmoj\GI10438-PA | 774 | GI10438-PA | 64..748 | 63..779 | 1617 | 47.8 | Plus |
Dmoj\GI23624-PA | 1400 | GI23624-PA | 571..1165 | 55..641 | 832 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13538-PA | 834 | GL13538-PA | 1..833 | 1..801 | 3078 | 69.8 | Plus |
Dper\GL13957-PA | 734 | GL13957-PA | 69..711 | 58..779 | 1077 | 40.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10913-PB | 802 | GA10913-PB | 1..801 | 1..801 | 3105 | 72.2 | Plus |
Dpse\GA26904-PA | 769 | GA26904-PA | 69..746 | 58..779 | 1233 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12107-PA | 802 | GM12107-PA | 1..802 | 1..802 | 4088 | 95.6 | Plus |
Dsec\GM12105-PA | 602 | GM12105-PA | 1..601 | 169..798 | 1165 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16611-PA | 802 | GD16611-PA | 1..802 | 1..802 | 4099 | 96 | Plus |
Dsim\GD16589-PA | 456 | GD16589-PA | 2..455 | 334..798 | 985 | 46.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10504-PA | 813 | GJ10504-PA | 35..813 | 23..802 | 2934 | 68.1 | Plus |
Dvir\GJ10655-PA | 536 | GJ10655-PA | 1..517 | 247..781 | 1376 | 51.7 | Plus |
Dvir\GJ16571-PA | 727 | GJ16571-PA | 23..720 | 63..780 | 1193 | 37.5 | Plus |
Dvir\GJ10654-PA | 178 | GJ10654-PA | 8..173 | 62..234 | 222 | 34.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22612-PA | 820 | GK22612-PA | 42..817 | 23..799 | 2976 | 69.6 | Plus |
Dwil\GK22557-PA | 481 | GK22557-PA | 1..478 | 195..681 | 1310 | 50.5 | Plus |
Dwil\GK14363-PA | 1085 | GK14363-PA | 376..1057 | 83..766 | 1114 | 36.2 | Plus |
Translation from 109 to 2517
> RE14222.hyp MNFNWCAGLFVVLALVSPIYSACPKENQMCLRNGTFQYCDGEERNSSDEL MQTHLVYCTSMFCEPEEFQHDYITRNHDQTPHQNKWKRARIGERATLHDV CLLRNGMPVTRECRVKDNRANWESTEHWDPVVCLRRFREHTISGDLNSLH DDVLEGRRRTNDTQGRREMTGIMRNMFRQRGGNLLPADVHMTGQMFGALM QQDKDATVSVDLVSVCKEIMSCDSKVLRLSAQLNATNSLLSQFESYMDAL PEQLVPKDRCGKVVAKPTSDEAETATTGVETYNFSDIGVQALITGNISVF FANPECDRITGLAIFSAPGDQRKTSASGFWYRFIRFSEDLAKVKEESNLE TAAFLPENLWRQVKSRGATYLIFKVYAHDALFVETSLQRTRKPRSKVISI SIPGLRSNYLSLPLPFLLRNENLRNPDSKAFSIGSGCGYWNYETWSTEGV STESSSDLLKDAIIECHTNHLTQFAFLVGGSYRANDLGEEILITPINEKV LDIISIVGCSLSLLGILGIFLTAALFKSWRSQASTKVLLHLCLAMCLQMM LFVFLNTDDVSEALVVNGNTVRCVALGAAMQYSILVLFSWMLIIAFLQFQ RYVTVIGIERPPRYILKAAIVAWLLPLVPTLLVALIDPDSYVPSAAQLST DTGICYPSGYGLIFGVVLPVTLITVCNLVIFVYVFYSISHSLSQSIHKNE KKMVVKQIRLSIMLFFLLGLTWIFGIFAFMQAGVAFSYLFCITATMQGFV MFIYFVLLDSTNRRLWVGLICPTKMELDVQKRTTELQSMTTSSTNYNSRS HQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11318-PA | 802 | CG11318-PA | 1..802 | 1..802 | 4179 | 100 | Plus |
CG15556-PC | 755 | CG15556-PC | 7..754 | 5..798 | 1346 | 37.4 | Plus |
CG15556-PB | 755 | CG15556-PB | 7..754 | 5..798 | 1346 | 37.4 | Plus |
CG15556-PA | 755 | CG15556-PA | 7..754 | 5..798 | 1346 | 37.4 | Plus |
CG43968-PA | 1026 | CG43968-PA | 587..1017 | 86..517 | 301 | 24.9 | Plus |