BDGP Sequence Production Resources |
Search the DGRC for RE14391
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 143 |
Well: | 91 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Sec63-RA |
Protein status: | RE14391.pep: gold |
Preliminary Size: | 2262 |
Sequenced Size: | 2957 |
Gene | Date | Evidence |
---|---|---|
CG8583 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8583 | 2002-07-13 | Blastp of sequenced clone |
CG8583 | 2003-01-01 | Sim4 clustering to Release 3 |
sec63 | 2008-04-29 | Release 5.5 accounting |
sec63 | 2008-08-15 | Release 5.9 accounting |
sec63 | 2008-12-18 | 5.12 accounting |
2957 bp (2957 high quality bases) assembled on 2002-07-13
GenBank Submission: BT001562
> RE14391.complete CTGTCGGTTCCAGCACGAGCCAAACAACCCTACGTGTCAGTCTCATGCGT CGGTGTAAATACAGAGTTTTTTAAGTTCGCGGCGTGCCAATCTCGCGATA TCTTGCAGCAGCAGCAGCAACAACACCAGCTCCTGCCCCATTCGAATCTC GCAGATCGCCGCGTGTCGATCGAGAATCCACGGGGCGCAGCGATTGTAGC GATAACTCCAACGCGACAGCAACATCAGCTGGATCTGCCGGAGGAAAAGT GCAGGGGAAAGCGGCGGCAGAGAAAGGAACGGAACGGAACGGAGCCAAAA GGCAGTGCCAGACAAAATACAAAATACATATAGTCGCTGTCGGAGATGGC GGGTCAAAAGTTTCAGTATGATGAGAGCGGCGGAACGTTCTACTACTTTG TGTTATCGTTCTTGGCGCTAATATTGATACCGACCACCATTTACTATTGG CCACGTAAAAAGAAACAAGATAACAGCAAACTTAAAGAGGAATGTCAGTG CGCCGACTGCCAGAAAAAGAAGACCATCTTGGCCAATGCCGAGCCGTACA GAGCTCTCACGTCATGGACCATCAAGCTGACCATAGTGCTGGGGTGGGCC CTACTGCTCTTCCTCACGTACCGCGTCTCGCAGTTCGACTACGAGATGGC CAGCTTCGATCCCTTCGAGATCCTGAATGTGCCGCCGACGTCGTCGCAGG CCGAGATCAAGAAGGCCTACTACCGGCTGTCCAAGGTGCTCCATCCCGAC AAGGAGACGGGTGACGAGAAGTCCTTCATGATGCTGAGCAAAGCGTACCA GGCGCTGACCGACGATGTGGCAAAGGAGAACTACGAGAAGTATGGTAATC CGGATGGACCGGGTGCCATGTCCTTTGGCATCGCCCTGCCCTCGTGGATT GTGGAGAAGGAGAATAGCGTTTGGGTTTTGGGTCTGTACGGCCTGGTCTT CATGGTGGCCATGCCCTCGGCAGTGGGTGTTTGGTGGTACCGCTCCATCC GCTTCAGTGGCGACAAAGTGCTGCTCGATACCACTCAGATGTACTTTTAC TTCATCCACAAGACACCGCACATGCTGCTCAAGCGGGCACTTATGGTTCT GGCAGCCAGTTTGGAGTTTGACAAGCGACACAACTCGCAGGTCCAGGAGC GGCAGTCGGACAATGACGAGGTGCCGGCGCTGATTAGACAGCTGCCCAAT CTGAATGAGAAGTGCAAGGAGCATCCGCTGTGCCGCATGTACTCCATCAA GGCTCGCGCCATCCTGCATGCCCATCTCAGTCGCATGCCCCTCAATCCGG AAACTCTGGAGCGCGATCGCCAGTTTGTGGTGAAGAAGTGCCCGTATTTG GTGCAAGAAATGGTCTCCTGCGTTCACCAGCTGGTCATGATGGCCTATGC CCGACGTGTGCCCCGCCTGCCCAGCATCGAAACGATTGAGAACTGCATGA AAATGTCGCCGATGATTATCCAAGGCCTGTGGGAGTTCAAATCGCCACTG CTGCAGCTGCCCCATCTCACCGAGGACCATCTGTACTTTATGAACAAGAA GAGGCACGTCAAGAACCTGCAGCAATTCGCCCAGCTCAAGCCGGAGGAGA GCCGTCAGCTTCTGAAGAACCTATCTGACTTTGAGTACGAGAACACGATG AAAGTGCTGGGCAAGATGCCGCTGATTGACTTCTCCATTCGCTGCGAGGT TATCGACGATGAGAACACCAATGTGGTGACCGCCGGGGCCATAGTTACGG TCACGGTTACGCTGGAGCGCAAGGACATGAAGACGCTATTCGGTGACACA AAGGCGCCTGAGAAGCAGGGCATCAAGGATGAGACCAATGAGGAGGCTGC CGGTGATGAGGATGAGGCTGCTGCCGCTGCGCCGGTCAAGAAGGCTTCTG CCTGGGCCAAGCCACGTAAGGGTGGCAAGGGAAAGGGTGGTAAGAAACCA GCCCAGAACCAAAAGAACCAGAAGAAGGTGCCGGCCAAGGCTGCGACAAC AGCTACGATCACGGCATCCGAGGATCAAGCGGCGGCGGGTAACTCCGATG CCGAATCGGAGGCTGGAAATGCGGATGGCAGCGATGTGGAATCGGCTGCC GGCAGTGGCAGCGAGGATGAGGAGAAGGGCAAGAACAACTCCTCGCTGGA CGACGACGATGACGAGGAGTGGGAGCGACTGCAAGCTAAGCTTAACAAGA GGGAGCGTCTCGAGGGCAAGTCTCGGCTGTCGCACACCGTCCACTGCCCC TACTTCCCCGAGGAGAAGCAGGAGTACTGGTGGACCTACATATGCGATCG CAAGTCGCGCACCCTGCTCACAGCGCCCTATCATGTGACCAATCTGGTCG AGAAGGAGGAGATCCAGCTGAAGTTTACCGCGCCGCGCTGGCCGGGCGTC TACACGTTCACCGTTTGCCTGAGATCGGACTCGTATTTGGGTATGGATCA GCAGCAGGAGCTGAAGTTGGATGTACAGAAGGCTCCCGCACCACCGACGG ATCATCCTCAGTGGGATCTGAGCGAATCGGAACCGGAGCACACCGATCAG CAGGAGAACCTGAGCGACTATACAACAGATACGTCCGATGAGGAGGACGG CGAATAAATCCACTGTCTACATGGACAGTGCGACGGACGGACGGACGGAT GGATAGACGTCCTGAACCCCAATCAACCTCAACCTCCTCTCTAATTCACT GGGACGGAAGAGAAGCCTCTTTGTTTTCCTTTTAGTAAATGAGTTTCGCG TGGCGCGTGGCGGAGGCACACCAATGCGAACCCTTCCTTCGCATTTTTAC TAGTTTTGTAATGGAAAAGACCCCGAACTAGTGCGTAAATAACTATAACT TCATTTTACCGTGTACTGTACTAAACATAATTATAATGTACTGTATATTT AATTATTTGGATACAAGAACTAAAAGTGAGACACGTAAATACAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sec63-RA | 3310 | sec63-RA | 135..3077 | 4..2946 | 14715 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 7354640..7355889 | 1179..2428 | 6250 | 100 | Plus |
chr3L | 24539361 | chr3L | 7353861..7354576 | 468..1183 | 3520 | 99.4 | Plus |
chr3L | 24539361 | chr3L | 7355971..7356485 | 2428..2942 | 2560 | 99.8 | Plus |
chr3L | 24539361 | chr3L | 7352678..7353154 | 4..473 | 2215 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 7362521..7363770 | 1179..2428 | 6250 | 100 | Plus |
3L | 28110227 | 3L | 7361742..7362457 | 468..1183 | 3565 | 99.9 | Plus |
3L | 28110227 | 3L | 7363852..7364370 | 2428..2946 | 2595 | 100 | Plus |
3L | 28110227 | 3L | 7360566..7361035 | 4..473 | 2335 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 7355621..7356870 | 1179..2428 | 6250 | 100 | Plus |
3L | 28103327 | 3L | 7354842..7355557 | 468..1183 | 3565 | 99.8 | Plus |
3L | 28103327 | 3L | 7356952..7357470 | 2428..2946 | 2595 | 100 | Plus |
3L | 28103327 | 3L | 7353666..7354135 | 4..473 | 2335 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\ISBu2 | 726 | Dbuz\ISBu2 ISBU2 726bp | 130..186 | 2679..2622 | 134 | 72.4 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6773..6948 | 106..275 | 126 | 55.7 | Plus |
Dfun\Isfun-1 | 928 | Dfun\Isfun-1 DFU309320 928bp Derived from AJ309320 (Rel. 68, Last updated, Version 1). | 137..186 | 2658..2606 | 122 | 75.5 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2632..2673 | 107..148 | 120 | 76.2 | Plus |
Dbuz\INE-1 | 1467 | Dbuz\INE-1 ISBU1 1467bp | 1265..1306 | 2624..2665 | 120 | 76.2 | Plus |
Dpse\mini-me | 4622 | Dpse\mini-me DPSEMINIME 4622bp | 148..189 | 2660..2619 | 120 | 76.2 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2348..2383 | 105..140 | 117 | 80.6 | Plus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7958..7982 | 106..130 | 116 | 96 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 9402..9426 | 106..130 | 116 | 96 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 7352675..7353150 | 1..469 | 98 | -> | Plus |
chr3L | 7353863..7354572 | 470..1179 | 99 | -> | Plus |
chr3L | 7354641..7355889 | 1180..2428 | 100 | -> | Plus |
chr3L | 7355972..7356485 | 2429..2942 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec63-RA | 1..2262 | 346..2607 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec63-RA | 1..2262 | 346..2607 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec63-RA | 1..2262 | 346..2607 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec63-RA | 1..2262 | 346..2607 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sec63-RA | 1..2262 | 346..2607 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec63-RA | 1..2942 | 1..2942 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec63-RA | 1..2942 | 1..2942 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec63-RA | 3..2944 | 1..2942 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec63-RA | 1..2942 | 1..2942 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sec63-RA | 3..2944 | 1..2942 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7360563..7361031 | 1..469 | 99 | -> | Plus |
3L | 7361744..7362453 | 470..1179 | 100 | -> | Plus |
3L | 7362522..7363770 | 1180..2428 | 100 | -> | Plus |
3L | 7363853..7364366 | 2429..2942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7360563..7361031 | 1..469 | 99 | -> | Plus |
3L | 7361744..7362453 | 470..1179 | 100 | -> | Plus |
3L | 7362522..7363770 | 1180..2428 | 100 | -> | Plus |
3L | 7363853..7364366 | 2429..2942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7360563..7361031 | 1..469 | 99 | -> | Plus |
3L | 7361744..7362453 | 470..1179 | 100 | -> | Plus |
3L | 7362522..7363770 | 1180..2428 | 100 | -> | Plus |
3L | 7363853..7364366 | 2429..2942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 7353663..7354131 | 1..469 | 99 | -> | Plus |
arm_3L | 7354844..7355553 | 470..1179 | 100 | -> | Plus |
arm_3L | 7355622..7356870 | 1180..2428 | 100 | -> | Plus |
arm_3L | 7356953..7357466 | 2429..2942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7353663..7354131 | 1..469 | 99 | -> | Plus |
3L | 7354844..7355553 | 470..1179 | 100 | -> | Plus |
3L | 7355622..7356870 | 1180..2428 | 100 | -> | Plus |
3L | 7356953..7357466 | 2429..2942 | 100 | Plus |
Translation from 345 to 2606
> RE14391.pep MAGQKFQYDESGGTFYYFVLSFLALILIPTTIYYWPRKKKQDNSKLKEEC QCADCQKKKTILANAEPYRALTSWTIKLTIVLGWALLLFLTYRVSQFDYE MASFDPFEILNVPPTSSQAEIKKAYYRLSKVLHPDKETGDEKSFMMLSKA YQALTDDVAKENYEKYGNPDGPGAMSFGIALPSWIVEKENSVWVLGLYGL VFMVAMPSAVGVWWYRSIRFSGDKVLLDTTQMYFYFIHKTPHMLLKRALM VLAASLEFDKRHNSQVQERQSDNDEVPALIRQLPNLNEKCKEHPLCRMYS IKARAILHAHLSRMPLNPETLERDRQFVVKKCPYLVQEMVSCVHQLVMMA YARRVPRLPSIETIENCMKMSPMIIQGLWEFKSPLLQLPHLTEDHLYFMN KKRHVKNLQQFAQLKPEESRQLLKNLSDFEYENTMKVLGKMPLIDFSIRC EVIDDENTNVVTAGAIVTVTVTLERKDMKTLFGDTKAPEKQGIKDETNEE AAGDEDEAAAAAPVKKASAWAKPRKGGKGKGGKKPAQNQKNQKKVPAKAA TTATITASEDQAAAGNSDAESEAGNADGSDVESAAGSGSEDEEKGKNNSS LDDDDDEEWERLQAKLNKRERLEGKSRLSHTVHCPYFPEEKQEYWWTYIC DRKSRTLLTAPYHVTNLVEKEEIQLKFTAPRWPGVYTFTVCLRSDSYLGM DQQQELKLDVQKAPAPPTDHPQWDLSESEPEHTDQQENLSDYTTDTSDEE DGE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10637-PA | 759 | GF10637-PA | 1..759 | 1..753 | 3605 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14419-PA | 753 | GG14419-PA | 1..753 | 1..753 | 4056 | 99.1 | Plus |
Dere\GG13510-PA | 2142 | GG13510-PA | 1893..2058 | 301..488 | 158 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14875-PA | 758 | GH14875-PA | 1..758 | 1..753 | 3440 | 88.3 | Plus |
Dgri\GH16760-PA | 2142 | GH16760-PA | 1860..2058 | 269..488 | 163 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sec63-PA | 753 | CG8583-PA | 1..753 | 1..753 | 3972 | 100 | Plus |
l(3)72Ab-PA | 2142 | CG5931-PA | 1845..2052 | 249..480 | 168 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12848-PA | 761 | GI12848-PA | 1..761 | 1..753 | 3486 | 88.3 | Plus |
Dmoj\GI13421-PA | 2142 | GI13421-PA | 1893..2058 | 301..488 | 163 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26342-PA | 727 | GL26342-PA | 1..727 | 1..753 | 3236 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21179-PA | 752 | GA21179-PA | 1..752 | 1..753 | 3540 | 91.4 | Plus |
Dpse\GA23706-PA | 196 | GA23706-PA | 1..164 | 1..176 | 285 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14835-PA | 653 | GM14835-PA | 1..653 | 101..753 | 3504 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14009-PA | 753 | GD14009-PA | 1..753 | 1..753 | 4057 | 99.2 | Plus |
Dsim\GD12528-PA | 325 | GD12528-PA | 14..241 | 234..488 | 160 | 26.6 | Plus |
Dsim\GD12528-PA | 325 | GD12528-PA | 220..313 | 614..710 | 151 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12993-PA | 764 | GJ12993-PA | 1..764 | 1..753 | 3557 | 90.3 | Plus |
Dvir\GJ11781-PA | 2142 | GJ11781-PA | 1893..2058 | 301..488 | 160 | 30.3 | Plus |
Translation from 345 to 2606
> RE14391.hyp MAGQKFQYDESGGTFYYFVLSFLALILIPTTIYYWPRKKKQDNSKLKEEC QCADCQKKKTILANAEPYRALTSWTIKLTIVLGWALLLFLTYRVSQFDYE MASFDPFEILNVPPTSSQAEIKKAYYRLSKVLHPDKETGDEKSFMMLSKA YQALTDDVAKENYEKYGNPDGPGAMSFGIALPSWIVEKENSVWVLGLYGL VFMVAMPSAVGVWWYRSIRFSGDKVLLDTTQMYFYFIHKTPHMLLKRALM VLAASLEFDKRHNSQVQERQSDNDEVPALIRQLPNLNEKCKEHPLCRMYS IKARAILHAHLSRMPLNPETLERDRQFVVKKCPYLVQEMVSCVHQLVMMA YARRVPRLPSIETIENCMKMSPMIIQGLWEFKSPLLQLPHLTEDHLYFMN KKRHVKNLQQFAQLKPEESRQLLKNLSDFEYENTMKVLGKMPLIDFSIRC EVIDDENTNVVTAGAIVTVTVTLERKDMKTLFGDTKAPEKQGIKDETNEE AAGDEDEAAAAAPVKKASAWAKPRKGGKGKGGKKPAQNQKNQKKVPAKAA TTATITASEDQAAAGNSDAESEAGNADGSDVESAAGSGSEDEEKGKNNSS LDDDDDEEWERLQAKLNKRERLEGKSRLSHTVHCPYFPEEKQEYWWTYIC DRKSRTLLTAPYHVTNLVEKEEIQLKFTAPRWPGVYTFTVCLRSDSYLGM DQQQELKLDVQKAPAPPTDHPQWDLSESEPEHTDQQENLSDYTTDTSDEE DGE*