BDGP Sequence Production Resources |
Search the DGRC for RE14405
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 144 |
Well: | 5 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG17124-RA |
Protein status: | RE14405.pep: gold |
Sequenced Size: | 1258 |
Gene | Date | Evidence |
---|---|---|
CG17124 | 2002-01-01 | Sim4 clustering to Release 2 |
CG17124 | 2002-04-04 | Blastp of sequenced clone |
CG17124 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17124 | 2008-04-29 | Release 5.5 accounting |
CG17124 | 2008-08-15 | Release 5.9 accounting |
CG17124 | 2008-12-18 | 5.12 accounting |
1258 bp (1258 high quality bases) assembled on 2002-04-04
GenBank Submission: AY095067
> RE14405.complete AGTCTTTCATTGGTGCTCACCGGCTGCGCGTGCTAAGCTCCGAGTTGCTA GGTCCAGAACCATACTTTTTAGATACTGTATCCAAACTCCGGGCAATCCG CTGCCGCTTTATAAACAAACAGTTAAACAAACCGACCGCTCGAACGTCGC CGTGTGTGTGTGTGCCTGTGTGCTTTTCGCCCTCATTGTGCTCTCGTGCA AATGAAAATTTCATTGAGCAGAAAGTCGCAGCAGCAGAAGCAGCAGCAGC AGCAGTAGAAAAGTGGAAAATCCTAAAGCGGCGCCAGCCTCAGCAAAAAA AGAAAATAAATTAAAAATCTCGGCTAGTGAAATTTCAGTCCAGAACTAGA CGCCGCAATTAAGCCAAATACAGACCGAACCACGACGAGTCAATCGCTGG AAAACTGCCAAAACAGCCACGCCAATCGATTGCAGGCGTTCCGCAAATTG AAGTTCAACCGGCGCAGCTTGTACCGCTAAATCGATCGACAAAGATGCAG TGCGGTCTGGAGCAGATGAACGACTGTGAGCGGTCGCCGAACCGGACGAA CCTCCGGGTCAACTTCAACGAGAAGGGGGCGGAGGTGAAGGAGCGGCGGG AGAAGTTCCTCACGGCCAAGTACGGTTCACACCAGATGAGCCTCATCCGC AAGCGGCTGGCCGTGGAGATGTGGCTCTACGACGAGCTACAGAAGCTCTT CGATCCACCAAACGAGGCCATCGATGTGGACATCGACGAGATACTGGACA TGGACACAGATGACATAAGAAGATCTCATCTTATAAGATTACTGTCCGTC TGCAAACGCCCGCAATCAGACATATCGAAGTTCATTGGCGATCTGCTGGA TCGCGCAAAAACCCTGTAAATCGCCGATGCCTCATTTGAAAAATCATCCA GCAGACCTACACATACATACATATATACTATGCAGATAAAGAAAAAGAAT TAACAAAACCTAGATGATTAAGTTTAGCTTGGAACGCAAAGAACAAAGAA TTCTTGAGATCTACCTATTCGAACACTGTGTTGATTTTCTCTATGTACTT TAGTTGTTAGTTTGTATCTTTGCGCTGATTAATTTGAAGTCTAACCTAAT TTAAGCTACCCAAGAAAATGATAAACATGATGAAGATCGTTAGCCGTAAG CTTATGGTGTAATGCCGCCGAAAACATAATACTTCATCAATTTTGTGATG ATATTTTTTTAATAAAACACAAACATGATATGATATGCCCAGAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 10743881..10744335 | 1240..786 | 2275 | 100 | Minus |
chr2L | 23010047 | chr2L | 10754671..10755083 | 413..1 | 2065 | 100 | Minus |
chr2L | 23010047 | chr2L | 10744546..10744842 | 710..414 | 1485 | 100 | Minus |
chr2L | 23010047 | chr2L | 10744399..10744486 | 785..698 | 395 | 96.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10745110..10745571 | 1247..786 | 2295 | 99.8 | Minus |
2L | 23513712 | 2L | 10755904..10756316 | 413..1 | 2065 | 100 | Minus |
2L | 23513712 | 2L | 10745782..10746078 | 710..414 | 1485 | 100 | Minus |
2L | 23513712 | 2L | 10745635..10745722 | 785..698 | 395 | 96.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10745110..10745571 | 1247..786 | 2295 | 99.7 | Minus |
2L | 23513712 | 2L | 10755904..10756316 | 413..1 | 2065 | 100 | Minus |
2L | 23513712 | 2L | 10745782..10746078 | 710..414 | 1485 | 100 | Minus |
2L | 23513712 | 2L | 10745635..10745722 | 785..698 | 395 | 96.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10743879..10744335 | 786..1242 | 99 | <- | Minus |
chr2L | 10744399..10744473 | 711..785 | 100 | <- | Minus |
chr2L | 10744546..10744842 | 414..710 | 100 | <- | Minus |
chr2L | 10754671..10755083 | 1..413 | 92 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17124-RB | 1..375 | 495..869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17124-RB | 1..375 | 495..869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17124-RA | 1..375 | 495..869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17124-RB | 1..375 | 495..869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17124-RA | 1..375 | 495..869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17124-RB | 1..1242 | 1..1242 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17124-RB | 1..1242 | 1..1242 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17124-RA | 10..1251 | 1..1242 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17124-RB | 1..1242 | 1..1242 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17124-RA | 10..1251 | 1..1242 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10745115..10745571 | 786..1242 | 99 | <- | Minus |
2L | 10745635..10745709 | 711..785 | 100 | <- | Minus |
2L | 10745782..10746078 | 414..710 | 100 | <- | Minus |
2L | 10755904..10756316 | 1..413 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10745115..10745571 | 786..1242 | 99 | <- | Minus |
2L | 10745635..10745709 | 711..785 | 100 | <- | Minus |
2L | 10745782..10746078 | 414..710 | 100 | <- | Minus |
2L | 10755904..10756316 | 1..413 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10745115..10745571 | 786..1242 | 99 | <- | Minus |
2L | 10745635..10745709 | 711..785 | 100 | <- | Minus |
2L | 10745782..10746078 | 414..710 | 100 | <- | Minus |
2L | 10755904..10756316 | 1..413 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10745115..10745571 | 786..1242 | 99 | <- | Minus |
arm_2L | 10745635..10745709 | 711..785 | 100 | <- | Minus |
arm_2L | 10745782..10746078 | 414..710 | 100 | <- | Minus |
arm_2L | 10755904..10756316 | 1..413 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10745115..10745571 | 786..1242 | 99 | <- | Minus |
2L | 10745635..10745709 | 711..785 | 100 | <- | Minus |
2L | 10745782..10746078 | 414..710 | 100 | <- | Minus |
2L | 10755904..10756316 | 1..413 | 100 | Minus |
Translation from 494 to 868
> RE14405.pep MQCGLEQMNDCERSPNRTNLRVNFNEKGAEVKERREKFLTAKYGSHQMSL IRKRLAVEMWLYDELQKLFDPPNEAIDVDIDEILDMDTDDIRRSHLIRLL SVCKRPQSDISKFIGDLLDRAKTL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14069-PA | 124 | GF14069-PA | 1..124 | 1..124 | 639 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10360-PA | 124 | GG10360-PA | 1..124 | 1..124 | 653 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11307-PA | 167 | GH11307-PA | 44..167 | 1..124 | 627 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17124-PC | 124 | CG17124-PC | 1..124 | 1..124 | 643 | 100 | Plus |
CG17124-PB | 124 | CG17124-PB | 1..124 | 1..124 | 643 | 100 | Plus |
CG17124-PA | 124 | CG17124-PA | 1..124 | 1..124 | 643 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17816-PA | 124 | GI17816-PA | 1..124 | 1..124 | 637 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26388-PA | 123 | GL26388-PA | 1..123 | 1..124 | 625 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14336-PA | 123 | GA14336-PA | 1..123 | 1..124 | 625 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11468-PA | 124 | GM11468-PA | 1..124 | 1..124 | 653 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22228-PA | 124 | GD22228-PA | 1..124 | 1..124 | 653 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17644-PA | 124 | GJ17644-PA | 1..124 | 1..124 | 648 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23984-PA | 124 | GK23984-PA | 1..124 | 1..124 | 643 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13361-PA | 124 | GE13361-PA | 1..124 | 1..124 | 653 | 100 | Plus |
Translation from 494 to 868
> RE14405.hyp MQCGLEQMNDCERSPNRTNLRVNFNEKGAEVKERREKFLTAKYGSHQMSL IRKRLAVEMWLYDELQKLFDPPNEAIDVDIDEILDMDTDDIRRSHLIRLL SVCKRPQSDISKFIGDLLDRAKTL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17124-PC | 124 | CG17124-PC | 1..124 | 1..124 | 643 | 100 | Plus |
CG17124-PB | 124 | CG17124-PB | 1..124 | 1..124 | 643 | 100 | Plus |
CG17124-PA | 124 | CG17124-PA | 1..124 | 1..124 | 643 | 100 | Plus |