BDGP Sequence Production Resources |
Search the DGRC for RE14437
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 144 |
Well: | 37 |
Vector: | pFlc-1 |
Associated Gene/Transcript | loqs-RB |
Protein status: | RE14437.pep: gold |
Preliminary Size: | 2591 |
Sequenced Size: | 2034 |
Gene | Date | Evidence |
---|---|---|
CG6866 | 2001-12-14 | Blastp of sequenced clone |
CG6866 | 2002-01-01 | Sim4 clustering to Release 2 |
CG6866 | 2003-01-01 | Sim4 clustering to Release 3 |
loqs | 2008-04-29 | Release 5.5 accounting |
loqs | 2008-08-15 | Release 5.9 accounting |
loqs | 2008-12-18 | 5.12 accounting |
2034 bp (2034 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071070
> RE14437.complete AAAATATCAGTAAAATACATACAATTCGTGTGTGCGTCTGGATTTTGCTG TATTTTTTATTTAAGAATGAATTATTAACTAACCATTAATAAATTATTAT TAAATAAAAAACAGTTAAAACCGCGATTCAAACATACACACCGAATCCTC CCGAAAACCGTGCAAAACAAGAACACCATGGACCAGGAGAATTTCCACGG CTCCAGCTTGCCGCAGCAGCTACAGAACCTCCACATCCAGCCGCAGCAGG CGTCCCCCAATCCTGTCCAGACGGGATTTGCTCCACGGCGGCACTATAAT AACCTTGTCGGCCTGGGCAATGGAAATGCCGTCAGTGGTAGTCCGGTGAA GGGTGCTCCGCTGGGGCAGCGCCATGTGAAGCTCAAGAAGGAGAAGATAT CCGCCCAGGTTGCGCAGCTGTCTCAGCCAGGTCAGCTGCAGCTGTCAGAT GTTGGTGATCCTGCCTTGGCGGGCGGATCGGGCTTACAAGGTGGAGTCGG CCTTATGGGCGTAATATTGCCCAGCGACGAGGCCTTAAAGTTCGTCAGCG AAACGGACGCCAATGGACTGGCCATGAAGACGCCCGTCAGCATTCTGCAA GAGCTGCTAAGCCGACGAGGAATTACTCCCGGCTATGAACTTGTCCAGAT CGAGGGCGCCATACATGAGCCGACCTTCCGGTTTCGCGTGTCCTTTAAAG ACAAGGATACGCCCTTCACGGCCATGGGGGCAGGACGATCGAAGAAGGAG GCCAAGCATGCGGCGGCCCGTGCGCTCATCGACAAGCTGATCGGCGCGCA GCTGCCGGAATCGCCTAGCAGCTCCGCTGGTCCGTCGGTGACTGGGCTCA CGGTCGCCGGAAGCGGAGGAGACGGCAATGCCAATGCCACAGGCGGAGGA GATGCCAGCGACAAGACCGTTGGTAATCCGATTGGCTGGTTGCAGGAAAT GTGCATGCAACGGCGATGGCCACCGCCGTCGTACGAAACGGAAACGGAAG TGGGTCTTCCCCACGAGCGGCTCTTTACGATCGCCTGCTCGATACTCAAC TACCGCGAGATGGGCAAGGGCAAAAGCAAGAAGATAGCCAAGCGCTTGGC CGCCCACCGCATGTGGATGCGTCTGCAGGAGACTCCCATCGATTCGGGCA AAATCAGCGACAGCATCTGCGGCGAGTTGGAGGGCGAACCCCGCAGTAGT GAAAATTATTATGGTGAATTGAAAGATATCTCTGTGCCGACACTGACCAC GCAGCACAGTAACAAAGTATCCCAGTTCCATAAGACCCTAAAAAATGCAA CGGGCAAAAAACTGCTTAAGTTACAGAAGACTTGCTTGAAGAACAACAAG ATTGATTACATCAAGCTGCTGGGCGAAATCGCCACGGAGAACCAGTTCGA GGTGACCTATGTGGACATAGAGGAGAAGACCTTCTCTGGCCAGTTCCAGT GCCTGGTTCAACTGTCCACGCTGCCCGTTGGCGTTTGCCACGGCAGCGGA CCAACAGCTGCCGATGCCCAGCGGCATGCCGCCCAGAATGCCCTCGAGTA CTTGAAGATCATGACCAAGAAGTAGGGGGTGCAGCCAACTGAATAGCAAA ATCTGAACGCACACCACGACCACGATCACGAGTATTTGATGAGAGCGATT ACCGAGTGGATACGGGATAACTAATGCACCAGTCTAATTGCTTTTCTTTC CACTTTTTGGCTCAATGCAGTGGCGATGTTACATATATATATATATATAT TTTGTTTCTTTTCCACCGATTCCTTTGATTAGGCAGTTGTATTTGTTAAC TGCATATGTAAATGTTCATATATGTACTACACTTACCGATGAATGTATGT ACGCTTGCAAATACAGACAAGCGTGTAATCGATATTGGAATCTTCTAGTC GCTTTCAAATTCTGAAAAACGTAAAACGGCAGATAAAACTAGGTTTAAGG TAGACTACGTGCTAGTTTGCGAAGGAAAAAGGCTTATGAATATAATCGGT ATTTGGTAATCGCTAAATAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
loqs-RB | 2224 | loqs-RB | 38..2051 | 2..2015 | 10070 | 100 | Plus |
loqs.a | 2221 | loqs.a | 38..2048 | 2..2015 | 10000 | 99.8 | Plus |
loqs-RC | 2154 | loqs-RC | 9..1195 | 2..1188 | 5935 | 100 | Plus |
loqs-RC | 2154 | loqs-RC | 1326..2152 | 1189..2015 | 4135 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 13381568..13382336 | 134..902 | 3845 | 100 | Plus |
chr2L | 23010047 | chr2L | 13383653..13384344 | 1324..2015 | 3460 | 100 | Plus |
chr2L | 23010047 | chr2L | 13382409..13382694 | 903..1188 | 1430 | 100 | Plus |
chr2L | 23010047 | chr2L | 13383329..13383466 | 1189..1326 | 690 | 100 | Plus |
chr2L | 23010047 | chr2L | 13381328..13381459 | 2..133 | 660 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13382896..13383664 | 134..902 | 3845 | 100 | Plus |
2L | 23513712 | 2L | 13384981..13385672 | 1324..2015 | 3460 | 100 | Plus |
2L | 23513712 | 2L | 13383737..13384022 | 903..1188 | 1430 | 100 | Plus |
2L | 23513712 | 2L | 13384657..13384794 | 1189..1326 | 690 | 100 | Plus |
2L | 23513712 | 2L | 13382656..13382787 | 2..133 | 660 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13382896..13383664 | 134..902 | 3845 | 100 | Plus |
2L | 23513712 | 2L | 13384981..13385672 | 1324..2015 | 3460 | 100 | Plus |
2L | 23513712 | 2L | 13383737..13384022 | 903..1188 | 1430 | 100 | Plus |
2L | 23513712 | 2L | 13384657..13384794 | 1189..1326 | 690 | 100 | Plus |
2L | 23513712 | 2L | 13382656..13382787 | 2..133 | 660 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
I-element | 5371 | I-element DMIFACA 5371bp Derived from M14954 (g157749) (Rel. 44, Last updated, Version 2). | 833..883 | 1279..1328 | 117 | 72.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 13381568..13382336 | 134..902 | 100 | -> | Plus |
chr2L | 13382409..13382694 | 903..1188 | 100 | -> | Plus |
chr2L | 13383329..13383466 | 1189..1326 | 100 | -> | Plus |
chr2L | 13383656..13384346 | 1327..2018 | 96 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
loqs-RB | 1..1398 | 178..1575 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
loqs-RB | 1..1398 | 178..1575 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
loqs-RB | 1..1398 | 178..1575 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
loqs-RB | 1..1398 | 178..1575 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
loqs-RB | 1..1398 | 178..1575 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
loqs-RB | 7..2024 | 1..2018 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
loqs-RB | 7..2021 | 1..2014 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
loqs-RB | 3..2017 | 1..2014 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
loqs-RB | 7..2024 | 1..2018 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
loqs-RB | 3..2017 | 1..2014 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13382654..13382787 | 1..133 | 99 | -> | Plus |
2L | 13382896..13383664 | 134..902 | 100 | -> | Plus |
2L | 13383737..13384022 | 903..1188 | 100 | -> | Plus |
2L | 13384657..13384794 | 1189..1326 | 100 | -> | Plus |
2L | 13384984..13385674 | 1327..2018 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13382654..13382787 | 1..133 | 99 | -> | Plus |
2L | 13382896..13383664 | 134..902 | 100 | -> | Plus |
2L | 13383737..13384022 | 903..1188 | 100 | -> | Plus |
2L | 13384657..13384794 | 1189..1326 | 100 | -> | Plus |
2L | 13384984..13385674 | 1327..2018 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13382654..13382787 | 1..133 | 99 | -> | Plus |
2L | 13382896..13383664 | 134..902 | 100 | -> | Plus |
2L | 13383737..13384022 | 903..1188 | 100 | -> | Plus |
2L | 13384657..13384794 | 1189..1326 | 100 | -> | Plus |
2L | 13384984..13385674 | 1327..2018 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 13382896..13383664 | 134..902 | 100 | -> | Plus |
arm_2L | 13383737..13384022 | 903..1188 | 100 | -> | Plus |
arm_2L | 13382654..13382787 | 1..133 | 99 | -> | Plus |
arm_2L | 13384657..13384794 | 1189..1326 | 100 | -> | Plus |
arm_2L | 13384984..13385674 | 1327..2018 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13382896..13383664 | 134..902 | 100 | -> | Plus |
2L | 13383737..13384022 | 903..1188 | 100 | -> | Plus |
2L | 13384657..13384794 | 1189..1326 | 100 | -> | Plus |
2L | 13384984..13385674 | 1327..2018 | 99 | Plus | |
2L | 13382654..13382787 | 1..133 | 99 | -> | Plus |
Translation from 177 to 1574
> RE14437.hyp MDQENFHGSSLPQQLQNLHIQPQQASPNPVQTGFAPRRHYNNLVGLGNGN AVSGSPVKGAPLGQRHVKLKKEKISAQVAQLSQPGQLQLSDVGDPALAGG SGLQGGVGLMGVILPSDEALKFVSETDANGLAMKTPVSILQELLSRRGIT PGYELVQIEGAIHEPTFRFRVSFKDKDTPFTAMGAGRSKKEAKHAAARAL IDKLIGAQLPESPSSSAGPSVTGLTVAGSGGDGNANATGGGDASDKTVGN PIGWLQEMCMQRRWPPPSYETETEVGLPHERLFTIACSILNYREMGKGKS KKIAKRLAAHRMWMRLQETPIDSGKISDSICGELEGEPRSSENYYGELKD ISVPTLTTQHSNKVSQFHKTLKNATGKKLLKLQKTCLKNNKIDYIKLLGE IATENQFEVTYVDIEEKTFSGQFQCLVQLSTLPVGVCHGSGPTAADAQRH AAQNALEYLKIMTKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
loqs-PB | 465 | CG6866-PB | 1..465 | 1..465 | 2407 | 100 | Plus |
loqs-PF | 464 | CG6866-PF | 1..464 | 1..465 | 2390 | 99.8 | Plus |
loqs-PA | 419 | CG6866-PA | 1..419 | 1..465 | 2114 | 90.1 | Plus |
loqs-PE | 418 | CG6866-PE | 1..418 | 1..465 | 2108 | 89.9 | Plus |
loqs-PC | 383 | CG6866-PC | 1..345 | 1..345 | 1750 | 98 | Plus |
Translation from 177 to 1574
> RE14437.pep MDQENFHGSSLPQQLQNLHIQPQQASPNPVQTGFAPRRHYNNLVGLGNGN AVSGSPVKGAPLGQRHVKLKKEKISAQVAQLSQPGQLQLSDVGDPALAGG SGLQGGVGLMGVILPSDEALKFVSETDANGLAMKTPVSILQELLSRRGIT PGYELVQIEGAIHEPTFRFRVSFKDKDTPFTAMGAGRSKKEAKHAAARAL IDKLIGAQLPESPSSSAGPSVTGLTVAGSGGDGNANATGGGDASDKTVGN PIGWLQEMCMQRRWPPPSYETETEVGLPHERLFTIACSILNYREMGKGKS KKIAKRLAAHRMWMRLQETPIDSGKISDSICGELEGEPRSSENYYGELKD ISVPTLTTQHSNKVSQFHKTLKNATGKKLLKLQKTCLKNNKIDYIKLLGE IATENQFEVTYVDIEEKTFSGQFQCLVQLSTLPVGVCHGSGPTAADAQRH AAQNALEYLKIMTKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23153-PA | 472 | GF23153-PA | 1..472 | 1..465 | 1725 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23848-PA | 464 | GG23848-PA | 1..464 | 1..465 | 2329 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13466-PA | 489 | GH13466-PA | 44..489 | 33..465 | 1471 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
loqs-PB | 465 | CG6866-PB | 1..465 | 1..465 | 2407 | 100 | Plus |
loqs-PF | 464 | CG6866-PF | 1..464 | 1..465 | 2390 | 99.8 | Plus |
loqs-PA | 419 | CG6866-PA | 1..419 | 1..465 | 2114 | 90.1 | Plus |
loqs-PE | 418 | CG6866-PE | 1..418 | 1..465 | 2108 | 89.9 | Plus |
loqs-PC | 383 | CG6866-PC | 1..345 | 1..345 | 1750 | 98 | Plus |
loqs-PD | 359 | CG6866-PD | 1..337 | 1..337 | 1746 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17218-PA | 454 | GI17218-PA | 26..454 | 33..465 | 1654 | 73.4 | Plus |
Dmoj\GI21342-PA | 318 | GI21342-PA | 4..307 | 134..420 | 151 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26052-PA | 470 | GL26052-PA | 125..470 | 116..465 | 1527 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19915-PA | 477 | GA19915-PA | 1..477 | 1..465 | 1569 | 65 | Plus |
Dpse\GA22530-PA | 153 | GA22530-PA | 1..153 | 312..465 | 679 | 82.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10477-PA | 464 | GM10477-PA | 1..464 | 1..465 | 2303 | 95.7 | Plus |
Dsec\GM13239-PA | 101 | GM13239-PA | 1..98 | 183..316 | 370 | 58.2 | Plus |
Dsec\GM26109-PA | 123 | GM26109-PA | 21..123 | 153..260 | 274 | 55.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\loqs-PA | 464 | GD23896-PA | 1..464 | 1..465 | 2293 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17975-PA | 481 | GJ17975-PA | 56..481 | 33..465 | 1665 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14845-PA | 512 | GK14845-PA | 77..512 | 29..465 | 1610 | 71.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18652-PA | 465 | GE18652-PA | 1..465 | 1..465 | 2291 | 95.3 | Plus |