BDGP Sequence Production Resources |
Search the DGRC for RE14575
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 145 |
Well: | 75 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Gip-RA |
Protein status: | RE14575.pep: gold |
Preliminary Size: | 936 |
Sequenced Size: | 989 |
Gene | Date | Evidence |
---|---|---|
CG2227 | 2001-12-14 | Blastp of sequenced clone |
CG2227 | 2002-01-01 | Sim4 clustering to Release 2 |
CG2227 | 2003-01-01 | Sim4 clustering to Release 3 |
Gip | 2008-04-29 | Release 5.5 accounting |
Gip | 2008-08-15 | Release 5.9 accounting |
Gip | 2008-12-18 | 5.12 accounting |
989 bp (989 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071075
> RE14575.complete AGGTATAATATAAAAAACGGGTAATCGCATCGTTCCCCCCCAGTTGTTTG CCAAGCGTGAACGCAGGCGGAGATTAGTGAACGGAAGATGGCACTCAAGT TTGCAGCGAATCTGAACTTTTTGTTCACGGAAAGAGCGACGTCGATCGCG GAGCGAATTCGTCTGGCCCACCAGAACGGATTCCGTGCGGTAGAGATCCC CTATCCCGAAGGCGAGACGAGCGACGTGGTGTCCGCCGTAAAGGAGACGG GTGTGGTGGTCAGTCTGGTGAATCTGGCCTTCGACAAGAGCGACGATCAG CTGCGTTTCGGCTCCACCAGTGTGCCCGGCTCGGAAAAGCTGTTCCGTAG CCAATTGGATGCCACCATTGATTTCGCCCGACAGGTTAACTGTGGCAAGA TTCATCTAACCGCTGGACTCTTCAAGGGCGGCCAGGAGAGTGACTACACG AAGACGTATACCGCCAATCTAAAGATCGCCGCCGATAGCCTTAGAGCCAG TAAAATGATCGGCGTGATAGAGCCAATTAACAAGTACGCCGTGCCTGGCT ACTACATGAATTCATACTCCAAAGCCGCTGGAATTCTGGCCGATGTGGCT GCGGACAACATTCAATTGCTGGCCGATCTGTATCACCTGCAGCATTTGCA CGGCAACGTTTCCAAGACGCTCGAGGAGTACAAGGCGCTGATTGGACACT TTCAGATCGCCCAGGTGCCGCATCGCCACGAGCCGGATGTTTCCGGTGAG CTGGACTACGGATTTGTGTTCAAGGCTCTCCAGGAATTCGGCTATGATGG ATGGATCGGTTGCGAGTACAAGCCGAAGACGACCACTGTCGAGGGTTTGG GTTGGGTCTCCAAATTGGGCTACACGCTATAATTATCACATCACATATAG TTTGGCATAAGGAACTGCTCTGCATTTATACACATGTATTTACACTGCTT ACAAACATAAAGATGGTTTAACCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 10220348..10221317 | 973..4 | 4805 | 99.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 10328873..10329846 | 977..4 | 4870 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 10336971..10337944 | 977..4 | 4870 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 10220348..10221320 | 1..973 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gip-RA | 1..795 | 88..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gip-RA | 1..795 | 88..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gip-RA | 1..795 | 88..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gip-RA | 1..795 | 88..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gip-RA | 1..795 | 88..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gip-RA | 1..973 | 1..973 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gip-RA | 1..973 | 1..973 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gip-RA | 1..973 | 1..973 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gip-RA | 1..973 | 1..973 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gip-RA | 24..996 | 1..973 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10328877..10329849 | 1..973 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10328877..10329849 | 1..973 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10328877..10329849 | 1..973 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 10222910..10223882 | 1..973 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10336975..10337947 | 1..973 | 99 | Minus |
Translation from 87 to 881
> RE14575.pep MALKFAANLNFLFTERATSIAERIRLAHQNGFRAVEIPYPEGETSDVVSA VKETGVVVSLVNLAFDKSDDQLRFGSTSVPGSEKLFRSQLDATIDFARQV NCGKIHLTAGLFKGGQESDYTKTYTANLKIAADSLRASKMIGVIEPINKY AVPGYYMNSYSKAAGILADVAADNIQLLADLYHLQHLHGNVSKTLEEYKA LIGHFQIAQVPHRHEPDVSGELDYGFVFKALQEFGYDGWIGCEYKPKTTT VEGLGWVSKLGYTL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19487-PA | 264 | GF19487-PA | 1..264 | 1..264 | 1297 | 89 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18931-PA | 264 | GG18931-PA | 1..264 | 1..264 | 1396 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18029-PA | 264 | GH18029-PA | 1..259 | 1..259 | 932 | 61.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gip-PA | 264 | CG2227-PA | 1..264 | 1..264 | 1363 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23817-PA | 263 | GI23817-PA | 2..258 | 3..259 | 866 | 61.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26790-PA | 264 | GL26790-PA | 1..264 | 1..264 | 1218 | 82.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15314-PA | 264 | GA15314-PA | 1..264 | 1..264 | 1218 | 82.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11322-PA | 264 | GM11322-PA | 1..264 | 1..264 | 1400 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12017-PA | 212 | GD12017-PA | 1..173 | 1..173 | 905 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23596-PA | 261 | GJ23596-PA | 1..256 | 3..259 | 896 | 59.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24933-PA | 264 | GK24933-PA | 1..264 | 1..264 | 1072 | 71.2 | Plus |
Dwil\GK18837-PA | 267 | GK18837-PA | 1..267 | 1..264 | 932 | 62.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Gip-PA | 264 | GE15402-PA | 1..264 | 1..264 | 1392 | 97.7 | Plus |
Translation from 87 to 881
> RE14575.hyp MALKFAANLNFLFTERATSIAERIRLAHQNGFRAVEIPYPEGETSDVVSA VKETGVVVSLVNLAFDKSDDQLRFGSTSVPGSEKLFRSQLDATIDFARQV NCGKIHLTAGLFKGGQESDYTKTYTANLKIAADSLRASKMIGVIEPINKY AVPGYYMNSYSKAAGILADVAADNIQLLADLYHLQHLHGNVSKTLEEYKA LIGHFQIAQVPHRHEPDVSGELDYGFVFKALQEFGYDGWIGCEYKPKTTT VEGLGWVSKLGYTL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gip-PA | 264 | CG2227-PA | 1..264 | 1..264 | 1363 | 100 | Plus |