BDGP Sequence Production Resources |
Search the DGRC for RE14725
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 147 |
Well: | 25 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG3446-RA |
Protein status: | RE14725.pep: gold |
Sequenced Size: | 915 |
Gene | Date | Evidence |
---|---|---|
CG3446 | 2001-12-14 | Blastp of sequenced clone |
CG3446 | 2002-01-01 | Sim4 clustering to Release 2 |
CG3446 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3446 | 2008-04-29 | Release 5.5 accounting |
CG3446 | 2008-08-15 | Release 5.9 accounting |
CG3446 | 2008-12-18 | 5.12 accounting |
915 bp (915 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071078
> RE14725.complete ACTAGTTGGTATTTTACCCTGCCCCAAGTCAGGCCACACTGCCTTGGTGT TATGCAAAAAACGTCATTTTTTTGACAATTCAACAGATTTTTTCCCTTTA TTCGAGCGAGGAGTCACCATGGCGACGGCAGTGCCGCATTGTCCCCCGAA ACAGGACCTTCCACCGCCGGGCGGCTACAAGAAGATACCCTTTGCCCGCG TGCCACCGAAGAGCTACTTCACAGGCTTCACCACCATCGGCACCTATGTG GTTGTGACAGCCGTTGGCCTGGGCATCTACTACTTGACCGCCAAGAAGGT GAAGCGCGACGAGATCGAGATGCGTTCCGCCCAGAATGTCATCTTTCCCA TTTTGGTCGCCGAGCGGGATCGCGAATTCCTGCGCCAGTTGCGACGCAAT CGGGACGAGGAGGCCGAGCTGATGAAGAACGTGCCCGGCTGGGAGGTGGG CACCTGGTATGGTGAGCCCGTTTTCAAGACCCTGCCCGAGGATACCCTGG TCACGCCCATTTTCAAGGAGTTCTACGCCCACTCCGACTGGAAGTCGTAC GCCAAGCGTGCCCACTTGAAGCTCTGGTCCTAAATCGGCCTAGTTAATGG ATTAGTTAATGCCTAAGCACGCACCTTTTTGTTTGTAGATCATCCGCCTA AGCGCCAAAAAAAGAAAGTATCGACCAATTATAATGTCAGATCAGATTGG CTGAAATACCGATTCTCTTTGTGTGTGTTTAATCCAAATCCTGTGCTGGA CCACCCGAGGTAGCCAGAGATTTTTACCAAACCGGGGGCGTTGCCGTCCA GCTGCAATATAGCCCACGGGCAGTGCTCAAAAATGGCCAAATTAAAATCT AATTGAAAATCTGCTGCTTAGTAAAAATAATAAATTCACAACATAAAACA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3446-RA | 1054 | CG3446-RA | 43..886 | 1..844 | 4205 | 99.8 | Plus |
CG3446.a | 1031 | CG3446.a | 127..863 | 108..844 | 3685 | 100 | Plus |
CG3446.a | 1031 | CG3446.a | 1..73 | 36..108 | 365 | 100 | Plus |
CG3446-RA | 1054 | CG3446-RA | 935..998 | 837..900 | 320 | 100 | Plus |
CG3446.a | 1031 | CG3446.a | 912..975 | 837..900 | 320 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6241632..6242255 | 844..221 | 3120 | 100 | Minus |
chrX | 22417052 | chrX | 6242318..6242435 | 225..108 | 575 | 99.2 | Minus |
chrX | 22417052 | chrX | 6242489..6242596 | 108..1 | 525 | 99.1 | Minus |
chrX | 22417052 | chrX | 6241522..6241584 | 899..837 | 315 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 6357533..6358155 | 844..222 | 3115 | 100 | Minus |
X | 23527363 | X | 6358219..6358336 | 225..108 | 590 | 100 | Minus |
X | 23527363 | X | 6358390..6358497 | 108..1 | 525 | 99 | Minus |
X | 23527363 | X | 6357421..6357484 | 900..837 | 320 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6242319..6242435 | 108..224 | 99 | <- | Minus |
chrX | 6242490..6242596 | 1..107 | 99 | Minus | |
chrX | 6241522..6241579 | 842..899 | 100 | <- | Minus |
chrX | 6241635..6242251 | 225..841 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3446-RA | 1..465 | 119..583 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3446-RA | 1..465 | 119..583 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3446-RA | 1..465 | 119..583 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3446-RA | 1..465 | 119..583 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3446-RA | 1..465 | 119..583 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3446-RA | 1..837 | 1..837 | 99 | <- | Plus |
CG3446-RA | 894..955 | 838..899 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3446-RA | 1..837 | 1..837 | 99 | <- | Plus |
CG3446-RA | 894..955 | 838..899 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3446-RA | 3..839 | 1..837 | 99 | <- | Plus |
CG3446-RA | 896..957 | 838..899 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3446-RA | 1..837 | 1..837 | 99 | <- | Plus |
CG3446-RA | 894..955 | 838..899 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3446-RA | 3..839 | 1..837 | 99 | <- | Plus |
CG3446-RA | 896..957 | 838..899 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6349324..6349381 | 842..899 | 100 | <- | Minus |
X | 6349438..6350054 | 225..841 | 100 | <- | Minus |
X | 6350122..6350238 | 108..224 | 100 | <- | Minus |
X | 6350293..6350399 | 1..107 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6349324..6349381 | 842..899 | 100 | <- | Minus |
X | 6349438..6350054 | 225..841 | 100 | <- | Minus |
X | 6350122..6350238 | 108..224 | 100 | <- | Minus |
X | 6350293..6350399 | 1..107 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6349324..6349381 | 842..899 | 100 | <- | Minus |
X | 6349438..6350054 | 225..841 | 100 | <- | Minus |
X | 6350122..6350238 | 108..224 | 100 | <- | Minus |
X | 6350293..6350399 | 1..107 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6243357..6243414 | 842..899 | 100 | <- | Minus |
arm_X | 6243471..6244087 | 225..841 | 100 | <- | Minus |
arm_X | 6244155..6244271 | 108..224 | 100 | <- | Minus |
arm_X | 6244326..6244432 | 1..107 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6357536..6358152 | 225..841 | 100 | <- | Minus |
X | 6358220..6358336 | 108..224 | 100 | <- | Minus |
X | 6358391..6358497 | 1..107 | 99 | Minus | |
X | 6357422..6357479 | 842..899 | 100 | <- | Minus |
Translation from 0 to 582
> RE14725.hyp LLGILPCPKSGHTALVLCKKRHFFDNSTDFFPLFERGVTMATAVPHCPPK QDLPPPGGYKKIPFARVPPKSYFTGFTTIGTYVVVTAVGLGIYYLTAKKV KRDEIEMRSAQNVIFPILVAERDREFLRQLRRNRDEEAELMKNVPGWEVG TWYGEPVFKTLPEDTLVTPIFKEFYAHSDWKSYAKRAHLKLWS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3446-PC | 154 | CG3446-PC | 1..154 | 40..193 | 830 | 100 | Plus |
CG3446-PB | 154 | CG3446-PB | 1..154 | 40..193 | 830 | 100 | Plus |
CG3446-PA | 154 | CG3446-PA | 1..154 | 40..193 | 830 | 100 | Plus |
Translation from 118 to 582
> RE14725.pep MATAVPHCPPKQDLPPPGGYKKIPFARVPPKSYFTGFTTIGTYVVVTAVG LGIYYLTAKKVKRDEIEMRSAQNVIFPILVAERDREFLRQLRRNRDEEAE LMKNVPGWEVGTWYGEPVFKTLPEDTLVTPIFKEFYAHSDWKSYAKRAHL KLWS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19540-PA | 154 | GF19540-PA | 1..154 | 1..154 | 782 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17677-PA | 154 | GG17677-PA | 1..154 | 1..154 | 813 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24919-PA | 154 | GH24919-PA | 1..154 | 1..154 | 762 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ND-B16.6-PC | 154 | CG3446-PC | 1..154 | 1..154 | 830 | 100 | Plus |
ND-B16.6-PB | 154 | CG3446-PB | 1..154 | 1..154 | 830 | 100 | Plus |
ND-B16.6-PA | 154 | CG3446-PA | 1..154 | 1..154 | 830 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15405-PA | 154 | GI15405-PA | 1..154 | 1..154 | 791 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26776-PA | 154 | GL26776-PA | 1..154 | 1..154 | 777 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17457-PA | 154 | GA17457-PA | 1..154 | 1..154 | 783 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12577-PA | 154 | GM12577-PA | 1..154 | 1..154 | 813 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24589-PA | 154 | GD24589-PA | 1..154 | 1..154 | 813 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16359-PA | 154 | GJ16359-PA | 1..154 | 1..154 | 789 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19996-PA | 154 | GK19996-PA | 1..154 | 1..154 | 783 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16467-PA | 154 | GE16467-PA | 1..154 | 1..154 | 815 | 99.4 | Plus |