BDGP Sequence Production Resources |
Search the DGRC for RE14803
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 148 |
Well: | 3 |
Vector: | pFlc-1 |
Associated Gene/Transcript | yellow-e3-RA |
Protein status: | RE14803.pep: gold |
Preliminary Size: | 1303 |
Sequenced Size: | 1333 |
Gene | Date | Evidence |
---|---|---|
CG17045 | 2001-12-14 | Blastp of sequenced clone |
CG17045 | 2002-01-01 | Sim4 clustering to Release 2 |
CG17045 | 2003-01-01 | Sim4 clustering to Release 3 |
yellow-e3 | 2008-04-29 | Release 5.5 accounting |
yellow-e3 | 2008-08-15 | Release 5.9 accounting |
yellow-e3 | 2008-12-18 | 5.12 accounting |
1333 bp (1333 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071081
> RE14803.complete AGTTTTCGGCAATCGTTTGAACCGCGCGGAACTGTCACTTAGCAGGTTCT CATTTGATAGCCATGTTGGTCGTCCTGCTCGCATTATTTTGTGCAGTCCA GGGCCAGGCATTGGTCCTCAAGGAGCTGCACACCCTGCATCAGTGGACGA ACCTCAGTTTGGGCGACGATCTGTCCAAGGGCAATCGCTTTCTGCCGGTG GATGTGGACATTGAGTACGGCGATGAGGGCAGGCATCGCACCTTTCTCAC GATTCCGCGACTGGGGATGGCCACACCCTTCACACTGGCCACCGTCATTG CGGAGCACAATGAGCTGGTGGAGAATCCCAGACTGGAACCGTATCCCAAC GAGGAGTGGCACGTGCCACCCAACAATTGCTCCGGCATCACCTCAGCCAT TAGGACTTATATCGACGAGTGCTGGCGACTCTGGGTGGTGGATTCAGGGC AGGTAAACTCCCTGCAGTTGTGCCCGCCACAAATTCTCACATTTGATTTG GTGAAGGACGAACTAGTCCAACGACACGCACTTCCGCCCGATTCCTACAT TCCCAGCGTATCCATCTTCACGGCTTTGGTGGTGGATCTGGCCGAGAGGG GCACACCCAACCGATGTGTTGGCGGCAGAGCGTATATAGCCGATGCCTGG GGTTATGGTCTAATCGTGTTTGACTCCCTGACGGGACGATCCTGGCGCAT AGAGCATGAGTCCATGAAGCCGTCGCCCTTGCTGAGATTAGGACGCTCCA GCAACTCGCAGGCGGGAATATTTACAGTGAGCCTCAGTCCCAGCGAAGTG GAAGACCGCTTTCTGTACTTTCACACGCTGAACTCCTTTAATGAGATGAG GGTTCCGCTCTCCCTGATCAACAACGAGACCTTCTGGAAGTCTGCGAATG CCAGCAGGGATAGCTTCCACAGCCTGGGCACCCGAGGAATCCAGTGCGAA TCGGAGGTGATGGATCAGTCGGGGAATCTCTACTGCAGCCTCATCAGTTT AGGGGCGCTGGTGAAATGGGAGGAGTCCGTGTCCAACTACACGGCGGATG ACCTGCGTGTGGTGGCCTACAATCCGCACAAGATCAAGTTCGTCACGGGC CTCAAGATCAACAGGAATTCCAAGGGAGAGGAGGAGCTGTGGGCCTTGAG CAGCCAGCCGAAACTCTTTGTTGGCGGCGACTTGCCCGCGAACGAGGTCA AGTTCCAAATAATTGGCTGCCGAACCGCTGACCTGCTTGCCAACACGCCG TGTACAGTGGGCGCCGCAGAAACCACGCCCACCAACGTTTAATTAAAACT TAGTTTTAACAAGTTCGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 9228642..9229154 | 1315..803 | 2535 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 9229676..9230085 | 410..1 | 2005 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 9229218..9229611 | 804..411 | 1850 | 98 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 13403420..13403937 | 1320..803 | 2575 | 99.8 | Minus |
3R | 32079331 | 3R | 13404459..13404868 | 410..1 | 2035 | 99.8 | Minus |
3R | 32079331 | 3R | 13404001..13404394 | 804..411 | 1970 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 13144251..13144768 | 1320..803 | 2575 | 99.8 | Minus |
3R | 31820162 | 3R | 13145290..13145699 | 410..1 | 2035 | 99.7 | Minus |
3R | 31820162 | 3R | 13144832..13145225 | 804..411 | 1970 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 9228640..9229152 | 805..1317 | 99 | <- | Minus |
chr3R | 9229218..9229611 | 411..804 | 97 | <- | Minus |
chr3R | 9229676..9230085 | 1..410 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-e3-RA | 1..1230 | 63..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-e3-RA | 1..1230 | 63..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-e3-RA | 1..1230 | 63..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-e3-RA | 1..1230 | 63..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-e3-RA | 1..1230 | 63..1292 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-e3-RA | 1..1317 | 1..1317 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-e3-RA | 1..1317 | 1..1317 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-e3-RA | 3..1319 | 1..1317 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-e3-RA | 1..1317 | 1..1317 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
yellow-e3-RA | 3..1319 | 1..1317 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13403423..13403935 | 805..1317 | 99 | <- | Minus |
3R | 13404001..13404394 | 411..804 | 100 | <- | Minus |
3R | 13404459..13404868 | 1..410 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13403423..13403935 | 805..1317 | 99 | <- | Minus |
3R | 13404001..13404394 | 411..804 | 100 | <- | Minus |
3R | 13404459..13404868 | 1..410 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13403423..13403935 | 805..1317 | 99 | <- | Minus |
3R | 13404001..13404394 | 411..804 | 100 | <- | Minus |
3R | 13404459..13404868 | 1..410 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 9229145..9229657 | 805..1317 | 99 | <- | Minus |
arm_3R | 9229723..9230116 | 411..804 | 100 | <- | Minus |
arm_3R | 9230181..9230590 | 1..410 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13144254..13144766 | 805..1317 | 99 | <- | Minus |
3R | 13144832..13145225 | 411..804 | 100 | <- | Minus |
3R | 13145290..13145699 | 1..410 | 99 | Minus |
Translation from 62 to 1291
> RE14803.pep MLVVLLALFCAVQGQALVLKELHTLHQWTNLSLGDDLSKGNRFLPVDVDI EYGDEGRHRTFLTIPRLGMATPFTLATVIAEHNELVENPRLEPYPNEEWH VPPNNCSGITSAIRTYIDECWRLWVVDSGQVNSLQLCPPQILTFDLVKDE LVQRHALPPDSYIPSVSIFTALVVDLAERGTPNRCVGGRAYIADAWGYGL IVFDSLTGRSWRIEHESMKPSPLLRLGRSSNSQAGIFTVSLSPSEVEDRF LYFHTLNSFNEMRVPLSLINNETFWKSANASRDSFHSLGTRGIQCESEVM DQSGNLYCSLISLGALVKWEESVSNYTADDLRVVAYNPHKIKFVTGLKIN RNSKGEEELWALSSQPKLFVGGDLPANEVKFQIIGCRTADLLANTPCTVG AAETTPTNV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17381-PA | 418 | GF17381-PA | 12..416 | 2..405 | 1793 | 82.3 | Plus |
Dana\GF11858-PA | 411 | GF11858-PA | 43..410 | 32..397 | 610 | 36.3 | Plus |
Dana\GF19909-PA | 404 | GF19909-PA | 6..403 | 18..397 | 562 | 30.7 | Plus |
Dana\GF11856-PA | 428 | GF11856-PA | 4..409 | 1..391 | 560 | 34.3 | Plus |
Dana\GF15359-PA | 453 | GF15359-PA | 50..404 | 43..399 | 334 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17052-PA | 409 | GG17052-PA | 1..409 | 1..409 | 2084 | 94.6 | Plus |
Dere\GG22850-PA | 412 | GG22850-PA | 56..411 | 44..397 | 589 | 35.4 | Plus |
Dere\GG22849-PA | 429 | GG22849-PA | 4..409 | 2..391 | 558 | 34.3 | Plus |
Dere\GG17051-PA | 440 | GG17051-PA | 44..439 | 20..397 | 541 | 31.3 | Plus |
Dere\GG16380-PA | 459 | GG16380-PA | 75..437 | 34..398 | 453 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18543-PA | 416 | GH18543-PA | 8..413 | 1..403 | 1535 | 69.9 | Plus |
Dgri\GH21214-PA | 428 | GH21214-PA | 42..414 | 20..384 | 607 | 38.1 | Plus |
Dgri\GH21216-PA | 431 | GH21216-PA | 62..430 | 33..397 | 600 | 36 | Plus |
Dgri\GH21215-PA | 446 | GH21215-PA | 83..427 | 45..391 | 573 | 38.2 | Plus |
Dgri\GH23996-PA | 455 | GH23996-PA | 72..433 | 34..398 | 376 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yellow-e3-PA | 409 | CG17045-PA | 1..409 | 1..409 | 2156 | 100 | Plus |
yellow-d2-PA | 412 | CG9891-PA | 44..411 | 32..397 | 581 | 35.1 | Plus |
yellow-d-PA | 432 | CG9889-PA | 31..413 | 19..391 | 555 | 35.8 | Plus |
yellow-e2-PB | 435 | CG17044-PB | 46..434 | 27..397 | 552 | 32.1 | Plus |
yellow-h-PA | 463 | CG1629-PA | 79..440 | 34..397 | 430 | 30 | Plus |
y-PA | 541 | CG3757-PA | 59..416 | 44..408 | 330 | 30.7 | Plus |
yellow-b-PB | 453 | CG17914-PB | 41..404 | 27..399 | 322 | 28 | Plus |
yellow-b-PA | 453 | CG17914-PA | 41..404 | 27..399 | 322 | 28 | Plus |
yellow-c-PB | 438 | CG4182-PB | 49..436 | 38..397 | 313 | 27.6 | Plus |
yellow-c-PA | 438 | CG4182-PA | 49..436 | 38..397 | 313 | 27.6 | Plus |
yellow-f-PC | 413 | CG18550-PC | 1..406 | 1..393 | 268 | 26.2 | Plus |
yellow-f-PB | 418 | CG18550-PB | 76..411 | 57..393 | 264 | 27.2 | Plus |
yellow-f-PA | 429 | CG18550-PA | 87..422 | 57..393 | 264 | 27.2 | Plus |
yellow-f2-PA | 452 | CG8063-PA | 110..437 | 57..383 | 242 | 25.4 | Plus |
yellow-e-PA | 530 | CG9792-PA | 1..386 | 1..384 | 229 | 25.9 | Plus |
yellow-g-PA | 393 | CG5717-PA | 55..236 | 24..213 | 160 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23242-PA | 408 | GI23242-PA | 23..408 | 15..404 | 1499 | 71.8 | Plus |
Dmoj\GI20502-PA | 429 | GI20502-PA | 16..428 | 1..397 | 604 | 34.1 | Plus |
Dmoj\GI20501-PA | 443 | GI20501-PA | 34..424 | 11..391 | 594 | 37.5 | Plus |
Dmoj\GI11002-PA | 470 | GI11002-PA | 82..446 | 34..397 | 399 | 28.8 | Plus |
Dmoj\GI13248-PA | 432 | GI13248-PA | 64..430 | 58..397 | 344 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23987-PA | 409 | GL23987-PA | 7..405 | 2..407 | 1750 | 79.7 | Plus |
Dper\GL17571-PA | 418 | GL17571-PA | 12..417 | 6..397 | 591 | 34 | Plus |
Dper\GL17570-PA | 434 | GL17570-PA | 32..414 | 19..391 | 564 | 36.1 | Plus |
Dper\GL23986-PA | 429 | GL23986-PA | 31..427 | 20..398 | 563 | 29.8 | Plus |
Dper\GL18156-PA | 466 | GL18156-PA | 81..443 | 34..397 | 405 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14292-PA | 409 | GA14292-PA | 7..405 | 2..407 | 1750 | 79.7 | Plus |
Dpse\GA22105-PA | 422 | GA22105-PA | 16..421 | 6..397 | 592 | 34.2 | Plus |
Dpse\GA14291-PB | 426 | GA14291-PB | 28..424 | 20..398 | 564 | 29.8 | Plus |
Dpse\GA22103-PA | 434 | GA22103-PA | 32..414 | 19..391 | 564 | 36.1 | Plus |
Dpse\GA27858-PA | 427 | GA27858-PA | 42..404 | 34..397 | 406 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25937-PA | 409 | GM25937-PA | 1..409 | 1..409 | 2129 | 97.3 | Plus |
Dsec\GM16008-PA | 412 | GM16008-PA | 56..411 | 44..397 | 583 | 34.9 | Plus |
Dsec\GM16007-PA | 430 | GM16007-PA | 29..411 | 19..391 | 561 | 35.5 | Plus |
Dsec\GM25936-PA | 426 | GM25936-PA | 35..425 | 25..397 | 541 | 31.5 | Plus |
Dsec\GM15882-PA | 438 | GM15882-PA | 6..436 | 2..397 | 325 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20499-PA | 387 | GD20499-PA | 1..344 | 1..344 | 1797 | 97.1 | Plus |
Dsim\GD11759-PA | 412 | GD11759-PA | 56..411 | 44..397 | 596 | 35.7 | Plus |
Dsim\GD11758-PA | 432 | GD11758-PA | 31..413 | 19..391 | 561 | 35.5 | Plus |
Dsim\GD20498-PA | 426 | GD20498-PA | 35..425 | 25..397 | 547 | 31.7 | Plus |
Dsim\GD23989-PA | 438 | GD23989-PA | 6..438 | 2..399 | 326 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10739-PA | 415 | GJ10739-PA | 13..415 | 4..407 | 1520 | 70.7 | Plus |
Dvir\GJ22352-PA | 430 | GJ22352-PA | 72..429 | 44..397 | 604 | 36.5 | Plus |
Dvir\GJ22351-PA | 453 | GJ22351-PA | 42..427 | 9..384 | 571 | 35.4 | Plus |
Dvir\GJ14923-PA | 455 | GJ14923-PA | 68..432 | 34..397 | 418 | 30.2 | Plus |
Dvir\GJ11869-PA | 435 | GJ11869-PA | 67..433 | 58..397 | 321 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13344-PA | 401 | GK13344-PA | 14..392 | 7..402 | 1527 | 71 | Plus |
Dwil\GK13343-PA | 420 | GK13343-PA | 4..416 | 3..398 | 592 | 31.4 | Plus |
Dwil\GK23285-PA | 422 | GK23285-PA | 53..421 | 33..397 | 591 | 35.8 | Plus |
Dwil\GK23284-PA | 446 | GK23284-PA | 45..427 | 19..391 | 587 | 36.3 | Plus |
Dwil\GK13672-PA | 468 | GK13672-PA | 78..430 | 31..384 | 409 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24440-PA | 411 | GE24440-PA | 1..411 | 1..409 | 2064 | 93.7 | Plus |
Dyak\GE14285-PA | 412 | GE14285-PA | 44..411 | 32..397 | 592 | 34.8 | Plus |
Dyak\GE14284-PA | 430 | GE14284-PA | 29..411 | 19..391 | 569 | 35.3 | Plus |
Dyak\GE24439-PA | 440 | GE24439-PA | 44..439 | 20..397 | 537 | 31.1 | Plus |
Dyak\GE14541-PA | 463 | GE14541-PA | 79..451 | 34..408 | 463 | 31 | Plus |
Translation from 62 to 1291
> RE14803.hyp MLVVLLALFCAVQGQALVLKELHTLHQWTNLSLGDDLSKGNRFLPVDVDI EYGDEGRHRTFLTIPRLGMATPFTLATVIAEHNELVENPRLEPYPNEEWH VPPNNCSGITSAIRTYIDECWRLWVVDSGQVNSLQLCPPQILTFDLVKDE LVQRHALPPDSYIPSVSIFTALVVDLAERGTPNRCVGGRAYIADAWGYGL IVFDSLTGRSWRIEHESMKPSPLLRLGRSSNSQAGIFTVSLSPSEVEDRF LYFHTLNSFNEMRVPLSLINNETFWKSANASRDSFHSLGTRGIQCESEVM DQSGNLYCSLISLGALVKWEESVSNYTADDLRVVAYNPHKIKFVTGLKIN RNSKGEEELWALSSQPKLFVGGDLPANEVKFQIIGCRTADLLANTPCTVG AAETTPTNV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
yellow-e3-PA | 409 | CG17045-PA | 1..409 | 1..409 | 2156 | 100 | Plus |
yellow-d2-PA | 412 | CG9891-PA | 44..411 | 32..397 | 581 | 35.1 | Plus |
yellow-d-PA | 432 | CG9889-PA | 31..413 | 19..391 | 555 | 35.8 | Plus |
yellow-e2-PB | 435 | CG17044-PB | 46..434 | 27..397 | 552 | 32.1 | Plus |
yellow-h-PA | 463 | CG1629-PA | 79..440 | 34..397 | 430 | 30 | Plus |