BDGP Sequence Production Resources |
Search the DGRC for RE15215
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 152 |
Well: | 15 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG9772-RD |
Protein status: | RE15215.pep: wuzgold |
Preliminary Size: | 2243 |
Sequenced Size: | 2045 |
Gene | Date | Evidence |
---|---|---|
CG9772 | 2002-09-28 | Blastp of sequenced clone |
CG9772 | 2008-04-29 | Release 5.5 accounting |
CG9772 | 2008-08-15 | Release 5.9 accounting |
CG9772 | 2008-12-18 | 5.12 accounting |
2045 bp (2045 high quality bases) assembled on 2002-09-28
GenBank Submission: BT001563
> RE15215.complete GAAGTTTTTGTGTTTACGGCGGTGAAAAAATAGATTTCGTGTAAATATGA GCAGTCGCAAGCACAGAGGCTCCGAAAACATGGAAAATTTGTGCCCGGTG ACCAGGTGAGTTTTCCTTTGCTTGGGGTGTGGGTTCAAGCAGCAGACCAC TGAACTGGTCGCGTGACGTCACACGCGCCACAAGTGTCCAAAAGAGGTCA AGAAAGTAACTTATTGAATTGCAGGGTTCTTGACCCTTTCTTTCATCAGC CATTCTGCTGATGAAGCACGATCGAACTGCACACTTTTAATAAATTTTCG ACTATTGCAGAAAGCGCTCGACTAATAAGAACCACGTCTCTGTTGTGGGC GCTCTAGTTTCCACTACGAAGTCATCGCACTACGAGCACCCTTCCTCGCC CTCGGCACTAACTTTTGAGGCCCTAGAAGAGATGGGAATCGGAATGCTTG ATTCCGAAGAAAGCAGCTCCTCAGCCCTCTCGGCCATCGCTTTGGCGGTT AGCGCCACCAGCGACGACAACTCAAATGAGACGACCCCGTGCGCCAGTGT GTCGCGCATGGCGCACCAGCTACAGCACACGCAACGGCTAAGTCTGGGCT CTACGGGGGACATCACACTGGATAGCCCAGCTGTGGAGGATTCACTGTCG ATGTCCCGTCAATCGGCCGAGAAGCTGCAGATTCTGGCGCAGGCTAAGCG CTCGTCGTTGGGTTCTGAAGGTAGCGGCAATTCAAACTCGCCCAGCAAAC GTTTGCGCAACCCCCTGGCTGCAGTCACCTGTAACAACCAGATTGATGGG ACTGCTTCGCTCAATTTTCAGCCATCAACCAGCAGGTTGGCGCAAGTTCG CCAGGCAAAAAAGCCCTCGACAACAAATATTACAACCCGAATAGTGGCAG CGGACAGTTTCTTTGTGTTTCGCACCCCGGCCATGAGTGCCCACATCAAC AGCGGCATAAACTACTTTGAAAGACTTTCAGACGAAATACTACTTGACAT CTTTAAGTGGCTCCCGAAGAAGACGCTGCTGCGCATGGCTACCGTTTGTC GACGCTTTAACCGCTGCTCTCGCGATGAGACTTTGTGGACAAGGCTAGAT TTGGGTTTGCGGACAATTAGACCAGGTGCCCTCGAGCAAATTGTACGGCG GGGAGTCCTTGTAATACGTCTGGCCCAGACTAGTATCCAGGAGCCCGCAT TTGCACCATATACAGAAGTGTTTAGGACCCGATTACAATATCTTGACCTG AGTATGGCTTCCATCACCCGAAGCTCACTGCTGACACTATTGTCCCACTG CCGCCAGCTAAAGAAAATAAGCTTAGAGAATATTGAGCTCGATGATGACA TCTGTGCAGAGATCGCAAAGAATGAAGCTTTGGAGGCGGTCAATCTGACT ATGGCTAGTGGCCTGACGTCCAACAGTGTTCGCCTGATGATGGAGTCACT TACCAGCCTAAGCAGCTTAAACATATCGTGGACTGACCTAAGTGCGGATG CTGTTACGGCGTTGGTTACCCACATTTCCCCCAACTTAATTCGGCTCAAT ATCGCTGGCTGCCGCCGCGTTTTGTTTGACTCGCATGTTGCAACCCTGCA AAAACGGTGTCCTCAGTTGTTGGAGCTTGATCTATCTGATTGCAATAGTC TAACACCAACAGTCATTACTGCAATTATGAAGTTCAAGATGCTGGAATAT TTGTCCGTCTCCCGATGCTATCTTATTCCAGCAACCAAATTTATTGAACT TAAGAGTATGCCCTCGCTAACCTATTTAGACATATTTGGGATGCTGTCGG ACACTGCAATGGAAGTCCTTGAGAAACAACTGCCAAAAATGGGTATAAAC AAATTCATTCACAGTTCGGTATCCCGCCCGACTGTTGGCACGCGACGCAC CTCCATTTGGGGTCTGCGCACGCGCGACTAAGTCTCGACTCTGCTGCTTC CGTTACCATTTGAATTTGTTTTGCTGCGTAAGCCACCCGTAACGCAGTTA TTTTATTCTCAATTCAACAACATAAATAATCAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9772-RD | 2213 | CG9772-RD | 23..2054 | 1..2032 | 10160 | 100 | Plus |
CG9772-RA | 2075 | CG9772-RA | 192..1916 | 308..2032 | 8625 | 100 | Plus |
CG9772.b | 1897 | CG9772.b | 137..1574 | 308..1745 | 7190 | 100 | Plus |
CG9772.b | 1897 | CG9772.b | 1589..1876 | 1745..2032 | 1440 | 100 | Plus |
CG9772.b | 1897 | CG9772.b | 35..139 | 1..105 | 525 | 100 | Plus |
CG9772-RA | 2075 | CG9772-RA | 90..194 | 1..105 | 525 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 162189..163372 | 1184..1 | 5920 | 100 | Minus |
chr3R | 27901430 | chr3R | 161729..162128 | 1584..1185 | 2000 | 100 | Minus |
chr3R | 27901430 | chr3R | 161163..161449 | 2031..1745 | 1435 | 100 | Minus |
chr3R | 27901430 | chr3R | 161506..161665 | 1744..1585 | 800 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 4336469..4337652 | 1184..1 | 5920 | 100 | Minus |
3R | 32079331 | 3R | 4336009..4336408 | 1584..1185 | 2000 | 100 | Minus |
3R | 32079331 | 3R | 4335442..4335729 | 2032..1745 | 1440 | 100 | Minus |
3R | 32079331 | 3R | 4335786..4335945 | 1744..1585 | 800 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 4077300..4078483 | 1184..1 | 5920 | 100 | Minus |
3R | 31820162 | 3R | 4076840..4077239 | 1584..1185 | 2000 | 100 | Minus |
3R | 31820162 | 3R | 4076273..4076560 | 2032..1745 | 1440 | 100 | Minus |
3R | 31820162 | 3R | 4076617..4076776 | 1744..1585 | 800 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 161163..161449 | 1745..2031 | 100 | <- | Minus |
chr3R | 161506..161665 | 1585..1744 | 100 | <- | Minus |
chr3R | 161729..162128 | 1185..1584 | 100 | <- | Minus |
chr3R | 162189..163372 | 1..1184 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9772-RB | 118..1746 | 301..1931 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9772-RB | 118..1746 | 301..1931 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Skp2-RB | 118..1746 | 301..1931 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9772-RB | 118..1746 | 301..1931 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Skp2-RA | 57..1680 | 308..1931 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9772-RD | 1..2031 | 1..2031 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9772-RD | 1..2031 | 1..2031 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Skp2-RB | 192..1920 | 301..2031 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9772-RD | 1..2031 | 1..2031 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Skp2-RA | 125..1848 | 308..2031 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4336009..4336408 | 1185..1584 | 100 | <- | Minus |
3R | 4335443..4335729 | 1745..2031 | 100 | <- | Minus |
3R | 4335786..4335945 | 1585..1744 | 100 | <- | Minus |
3R | 4336469..4337652 | 1..1184 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4336009..4336408 | 1185..1584 | 100 | <- | Minus |
3R | 4335443..4335729 | 1745..2031 | 100 | <- | Minus |
3R | 4335786..4335945 | 1585..1744 | 100 | <- | Minus |
3R | 4336469..4337652 | 1..1184 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4336009..4336408 | 1185..1584 | 100 | <- | Minus |
3R | 4335443..4335729 | 1745..2031 | 100 | <- | Minus |
3R | 4335786..4335945 | 1585..1744 | 100 | <- | Minus |
3R | 4336469..4337652 | 1..1184 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 161165..161451 | 1745..2031 | 100 | <- | Minus |
arm_3R | 161508..161667 | 1585..1744 | 100 | <- | Minus |
arm_3R | 161731..162130 | 1185..1584 | 100 | <- | Minus |
arm_3R | 162191..163374 | 1..1184 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4076274..4076560 | 1745..2031 | 100 | <- | Minus |
3R | 4076617..4076776 | 1585..1744 | 100 | <- | Minus |
3R | 4076840..4077239 | 1185..1584 | 100 | <- | Minus |
3R | 4077300..4078483 | 1..1184 | 100 | Minus |
Translation from 431 to 1930
> RE15215.pep MGIGMLDSEESSSSALSAIALAVSATSDDNSNETTPCASVSRMAHQLQHT QRLSLGSTGDITLDSPAVEDSLSMSRQSAEKLQILAQAKRSSLGSEGSGN SNSPSKRLRNPLAAVTCNNQIDGTASLNFQPSTSRLAQVRQAKKPSTTNI TTRIVAADSFFVFRTPAMSAHINSGINYFERLSDEILLDIFKWLPKKTLL RMATVCRRFNRCSRDETLWTRLDLGLRTIRPGALEQIVRRGVLVIRLAQT SIQEPAFAPYTEVFRTRLQYLDLSMASITRSSLLTLLSHCRQLKKISLEN IELDDDICAEIAKNEALEAVNLTMASGLTSNSVRLMMESLTSLSSLNISW TDLSADAVTALVTHISPNLIRLNIAGCRRVLFDSHVATLQKRCPQLLELD LSDCNSLTPTVITAIMKFKMLEYLSVSRCYLIPATKFIELKSMPSLTYLD IFGMLSDTAMEVLEKQLPKMGINKFIHSSVSRPTVGTRRTSIWGLRTRD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16815-PA | 561 | GF16815-PA | 58..561 | 1..499 | 2027 | 79.9 | Plus |
Dana\GF15907-PA | 383 | GF15907-PA | 68..357 | 25..309 | 1009 | 68.9 | Plus |
Dana\GF11789-PA | 637 | GF11789-PA | 226..458 | 179..429 | 188 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11654-PA | 561 | GG11654-PA | 61..561 | 1..499 | 2248 | 91.4 | Plus |
Dere\GG22638-PA | 641 | GG22638-PA | 230..462 | 179..429 | 196 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18735-PA | 579 | GH18735-PA | 55..579 | 1..499 | 1682 | 69.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Skp2-PE | 559 | CG9772-PE | 61..559 | 1..499 | 2482 | 100 | Plus |
Skp2-PA | 559 | CG9772-PA | 61..559 | 1..499 | 2482 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22887-PA | 589 | GI22887-PA | 62..589 | 1..499 | 1675 | 67.5 | Plus |
Dmoj\GI21037-PA | 677 | GI21037-PA | 266..498 | 179..429 | 194 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12326-PA | 533 | GL12326-PA | 60..515 | 1..459 | 1683 | 74.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22024-PB | 548 | GA22024-PB | 53..548 | 1..499 | 1946 | 77.3 | Plus |
Dpse\GA22024-PA | 555 | GA22024-PA | 60..555 | 1..499 | 1942 | 77.3 | Plus |
Dpse\GA22024-PC | 341 | GA22024-PC | 60..308 | 1..252 | 836 | 71.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10708-PA | 557 | GM10708-PA | 61..557 | 1..499 | 2331 | 94.6 | Plus |
Dsec\GM20416-PA | 653 | GM20416-PA | 242..474 | 179..429 | 197 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19685-PA | 557 | GD19685-PA | 61..557 | 1..499 | 2344 | 95 | Plus |
Dsim\GD25892-PA | 615 | GD25892-PA | 204..436 | 179..429 | 194 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14183-PA | 584 | GJ14183-PA | 61..584 | 1..499 | 1732 | 70.3 | Plus |
Dvir\GJ21964-PA | 660 | GJ21964-PA | 249..481 | 179..429 | 185 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11443-PA | 590 | GK11443-PA | 63..590 | 1..499 | 1786 | 68.4 | Plus |
Dwil\GK21630-PA | 634 | GK21630-PA | 223..455 | 179..429 | 185 | 26 | Plus |
Dwil\GK11217-PA | 764 | GK11217-PA | 393..678 | 178..470 | 156 | 26 | Plus |
Translation from 431 to 1930
> RE15215.hyp MGIGMLDSEESSSSALSAIALAVSATSDDNSNETTPCASVSRMAHQLQHT QRLSLGSTGDITLDSPAVEDSLSMSRQSAEKLQILAQAKRSSLGSEGSGN SNSPSKRLRNPLAAVTCNNQIDGTASLNFQPSTSRLAQVRQAKKPSTTNI TTRIVAADSFFVFRTPAMSAHINSGINYFERLSDEILLDIFKWLPKKTLL RMATVCRRFNRCSRDETLWTRLDLGLRTIRPGALEQIVRRGVLVIRLAQT SIQEPAFAPYTEVFRTRLQYLDLSMASITRSSLLTLLSHCRQLKKISLEN IELDDDICAEIAKNEALEAVNLTMASGLTSNSVRLMMESLTSLSSLNISW TDLSADAVTALVTHISPNLIRLNIAGCRRVLFDSHVATLQKRCPQLLELD LSDCNSLTPTVITAIMKFKMLEYLSVSRCYLIPATKFIELKSMPSLTYLD IFGMLSDTAMEVLEKQLPKMGINKFIHSSVSRPTVGTRRTSIWGLRTRD*