BDGP Sequence Production Resources |
Search the DGRC for RE15376
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 153 |
Well: | 76 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG16890-RB |
Protein status: | RE15376.pep: wuzgold |
Sequenced Size: | 1246 |
Gene | Date | Evidence |
---|---|---|
CG16890 | 2003-01-01 | Sim4 clustering to Release 3 |
CG16890 | 2004-12-16 | Blastp of sequenced clone |
CG16890 | 2008-04-29 | Release 5.5 accounting |
CG16890 | 2008-08-15 | Release 5.9 accounting |
CG16890 | 2008-12-18 | 5.12 accounting |
1246 bp (1246 high quality bases) assembled on 2004-12-16
GenBank Submission: BT021309
> RE15376.complete ATTATAAATTTTTTATCATAATGAGCGGCTCGCAATTATTCCCAGTGAAT CTGAACAACCTGAGTGCCAAGGAGCGACACAACTATATACTTAGTAATTA CGTGCTTAACCTACCGAATGAGACGGAATCACGTCGGCACAAGCGAGACA TCGATGTAATCCGAGAGAATCACCGCTTCCTGTGGGAGGACGACGAGTTG GATAGCGACACCCTAAGCTGGGAGCAGCGCTTGGCCCTGCGATACTACAG GAAGCTATTTAAGGAGTACTGCATCGCGGACCTGTCCCGCTACAAGGAGA ACAAGATAGCGCTGCGCTGGCGAACGGAGCAGGAGGTGGTCACCGGAACC GGGCAGTTCCAGTGCGGCAGCCGGCATTGCGGGGAGCGGGATAATCTGCG CAGCTGGGAGGTAAACTTTAGGTATATCGAAAAGGGTGAGCCCCTAAATG CGCTGGTCAAGGTGGGTTCCAAATGGGTTTCCGCGATTGTGTCACTAATG GGAATTCCATAGGTGCGGCTGTGTCCCACCCACACGGATCAGCTGAACTA CCGCACCAAGAAGAGAGAATGCAAGAAGCGGAGACGCAGGGAAAAGGAGG AACGGCGCGCTGAAAAGAAACGTAAGCGTCGAAAACTCGATGTTGGTCAC GAAAGTTCTGGCGAAGAGGAGGAGGAGCCTGTCGAACCAGCATCCGAATC CCATCCAGAAGCCAGCAAGGAGCCCACAGACTCAAAGGATGCCACCACGG CAGACGAACAGATCTGGCAACAACAACCCGATATAAGCCGAGAGCAAGCC TCCAGAGAGCAGGAATTCGAGCGATATCTAGAGGATCTCATTTTTTAAAA TACATAGCACATTTATTTGGATTCAACGTAGACACTAGTGCTCTTTTTTA TAGTTACTGGCCGCTAGATGCGTTCGCTTACGAACTACGATGTACATGTA CACTCACATTTACAGGATTATTCACAAGAACTGCGTGTTAAAACCGACAC CAAATCTAAAGTTGAACTGGACATTAAGGCTGTGACTCTGATTGATTTTT GGAAACATTTCCGAATGGCTACATTTCAGGCATGCACCTAGTTCAATCGC TATTTCTATATCCATCGAATGCAAATCGAAGGTTCGAAAATACAATACTA TTTCACCTTACGTTTGTGGTCAAAACAAATTGTTGAAATCCAGCCACTGA AGAGTTTCTAAATATAAATCGCTCTAGAACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16890.a | 1089 | CG16890.a | 479..1089 | 511..1121 | 3055 | 100 | Plus |
CG16890-RB | 611 | CG16890-RB | 1..611 | 1..611 | 3055 | 100 | Plus |
CG16890.a | 1089 | CG16890.a | 20..483 | 1..464 | 2320 | 100 | Plus |
CG16890-RA | 952 | CG16890-RA | 41..504 | 1..464 | 2320 | 100 | Plus |
CG16890-RA | 952 | CG16890-RA | 500..952 | 511..963 | 2265 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 13780941..13782169 | 1229..1 | 6115 | 99.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13782225..13783457 | 1233..1 | 6150 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13782225..13783457 | 1233..1 | 6150 | 99.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 13780940..13782169 | 1..1230 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16890-RB | 1..492 | 21..512 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16890-RB | 1..492 | 21..512 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16890-RA | 1..444 | 21..464 | 100 | == | Plus |
CG16890-RA | 445..777 | 516..848 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16890-RB | 1..492 | 21..512 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16890-RA | 445..777 | 516..848 | 100 | Plus | |
CG16890-RA | 1..444 | 21..464 | 100 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16890-RB | 1..611 | 1..611 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16890-RB | 1..611 | 1..611 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16890-RD | 53..465 | 45..457 | 100 | == | Plus |
CG16890-RD | 466..1184 | 508..1227 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16890-RB | 1..611 | 1..611 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16890-RD | 53..465 | 45..457 | 100 | == | Plus |
CG16890-RD | 466..1184 | 508..1227 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13782228..13783457 | 1..1230 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13782228..13783457 | 1..1230 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13782228..13783457 | 1..1230 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 13782228..13783457 | 1..1230 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13782228..13783457 | 1..1230 | 99 | Minus |
Translation from 2 to 511
> RE15376.hyp YKFFIIMSGSQLFPVNLNNLSAKERHNYILSNYVLNLPNETESRRHKRDI DVIRENHRFLWEDDELDSDTLSWEQRLALRYYRKLFKEYCIADLSRYKEN KIALRWRTEQEVVTGTGQFQCGSRHCGERDNLRSWEVNFRYIEKGEPLNA LVKVGSKWVSAIVSLMGIP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16890-PC | 258 | CG16890-PC | 1..148 | 7..154 | 793 | 100 | Plus |
CG16890-PA | 258 | CG16890-PA | 1..148 | 7..154 | 793 | 100 | Plus |
CG16890-PD | 248 | CG16890-PD | 1..138 | 17..154 | 740 | 99.3 | Plus |
Translation from 20 to 511
> RE15376.pep MSGSQLFPVNLNNLSAKERHNYILSNYVLNLPNETESRRHKRDIDVIREN HRFLWEDDELDSDTLSWEQRLALRYYRKLFKEYCIADLSRYKENKIALRW RTEQEVVTGTGQFQCGSRHCGERDNLRSWEVNFRYIEKGEPLNALVKVGS KWVSAIVSLMGIP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21691-PA | 261 | GF21691-PA | 1..148 | 1..148 | 674 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10185-PA | 258 | GG10185-PA | 1..148 | 1..148 | 749 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10621-PA | 258 | GH10621-PA | 1..148 | 1..148 | 638 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16890-PC | 258 | CG16890-PC | 1..148 | 1..148 | 793 | 100 | Plus |
CG16890-PA | 258 | CG16890-PA | 1..148 | 1..148 | 793 | 100 | Plus |
CG16890-PD | 248 | CG16890-PD | 1..138 | 11..148 | 740 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19750-PA | 249 | GI19750-PA | 1..149 | 1..148 | 610 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21094-PA | 255 | GL21094-PA | 1..148 | 1..148 | 637 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14200-PA | 255 | GA14200-PA | 1..148 | 1..148 | 636 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15125-PA | 258 | GM15125-PA | 1..148 | 1..148 | 787 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22045-PA | 258 | GD22045-PA | 1..148 | 1..148 | 794 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18091-PA | 257 | GJ18091-PA | 1..148 | 1..148 | 629 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18198-PA | 263 | GK18198-PA | 3..149 | 2..148 | 645 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11459-PA | 258 | GE11459-PA | 1..148 | 1..148 | 770 | 95.9 | Plus |