BDGP Sequence Production Resources |
Search the DGRC for RE15472
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 154 |
Well: | 72 |
Vector: | pFlc-1 |
Associated Gene/Transcript | ase-RA |
Protein status: | RE15472.pep: gold |
Preliminary Size: | 1461 |
Sequenced Size: | 2446 |
Gene | Date | Evidence |
---|---|---|
CG3258 | 2002-01-01 | Sim4 clustering to Release 2 |
CG3258 | 2002-04-04 | Blastp of sequenced clone |
CG3258 | 2003-01-01 | Sim4 clustering to Release 3 |
ase | 2008-04-29 | Release 5.5 accounting |
ase | 2008-08-15 | Release 5.9 accounting |
ase | 2008-12-18 | 5.12 accounting |
2446 bp (2446 high quality bases) assembled on 2002-04-04
GenBank Submission: AY095069
> RE15472.complete CGGTTGGGTTTGCGTTTTAGTTTGAGTTCGGAGTTTAGGGGCACGCGACA CAGAGCGCCAGCAGCTGTCCTGATGCAAGGACACGGAAACCATATTACAT CAGTCACCAGTTAACATTCACTCAAGAAGGACTAACTTGCTAAAAGTACA CCCGCAATCGCCACCAGTTTTTCTCCCGCCCTCAAAAAGCCACGAATCAA AAAACTTAATTATGGCCGCCTTAAGCTTCAGCCCATCACCTCCTCCAAAA GAAAACCCCAAGGAAAACCCCAATCCAGGAATAAAAACCACGTTGAAACC TTTTGGAAAGATTACCGTTCACAATGTTTTAAGTGAGAGTGGCGCCAACG CCTTGCAACAGCATATAGCCAATCAGAACACCATTATTCGAAAGATCCGG GACTTTGGCATGCTGGGCGCTGTTCAAAGTGCCGCAGCCAGCACAACTAA CACCACACCCATATCCAGTCAACGGAAGAGGCCCCTGGGAGAATCCCAAA AGCAGAACCGGCACAACCAGCAGAATCAACAGCTTAGTAAAACATCAGTG CCTGCTAAAAAATGCAAGACCAACAAGAAGTTGGCGGTTGAAAGGCCCCC AAAAGCAGGAACTATAAGCCACCCTCATAAAAGCCAAAGCGATCAGAGTT TTGGGACTCCTGGAAGAAAGGGTTTGCCTTTGCCACAAGCCGTTGCCCGT AGAAACGCTAGGGAAAGAAATCGCGTGAAGCAGGTTAACAATGGATTTGC TTTACTCCGGGAGAAGATCCCAGAAGAAGTATCTGAGGCTTTTGAGGCCC AGGGGGCGGGTAGAGGAGCAAGCAAGAAGCTATCCAAAGTGGAGACCCTC CGCATGGCCGTAGAGTACATAAGAAGTTTGGAAAAACTGCTGGGATTTGA TTTTCCACCTCTCAACAGTCAGGGGAATAGTTCTGGTTCCGGCGATGATA GCTTTATGTTTATTAAGGACGAATTCGATTGTCTGGATGAACATTTCGAC GACTCGCTGAGCAACTACGAAATGGATGAGCAACAGACTGTCCAACAAAC TTTATCCGAGGATATGCTAAACCCTCCGCAAGCCAGTGATCTCCTGCCTA GTTTGACTACATTAAATGGGTTGCAATACATCAGAATACCAGGAACCAAC ACCTACCAACTGCTGACGACTGACTTATTGGGCGATTTGAGTCACGAGCA AAAACTTGAAGAAACAGCTGCTTCGGGCCAGTTATCGCGATCGCCCGTGC CACAAAAGGTGGTAAGAAGTCCCTGCTCTTCTCCAGTTTCACCTGTCGCC TCGACTGAATTGCTGTTACAGACACAGACGTGTGCCACACCGCTGCAACA GCAAGTAATCAAACAGGAATACGTCAGTACCAACATTAGCAGCAGCAGCA ACGCACAGACTTCCCCGCAGCAGCAGCAGCAAGTTCAGAACCTGGGATCG TCGCCTATTTTACCCGCGTTCTACGACCAGGAGCCCGTGAGCTTCTACGA CAACGTAGTCCTTCCCGGATTCAAGAAGGAATTCAGCGATATTTTGCAGC AAGATCAGCCCAACAATACAACCGCTGGCTGCCTTTCGGACGAGAGCATG ATCGATGCCATTGACTGGTGGGAGGCACATGCACCTAAATCTAATGGTGC ATGCACCAATCTGTCCGTTTAGCCGAATTTTTTCACATCACGCATCTCGG AAAAGCCGATTGCATTTTTTGGCATACTTTTTAAATGATTTTAAATCCTC ACAGCATAAGTCTGTGGCAGGCCATTCTATCTAAAGTTTTTTTTAATCAA GCCATGACTGAGTCATTGTGTAAATATCAATTTAAGCCGAGAAAGGAGGA TAACTTCGGCCAGCCGAAGCTTATATACCTTTGCTGTTAAAACCATGTAT TTAATATGAAAGTTCGCACAATTTCGATGAAGTTTATCACAAATTTACGA TTTCATCAAGATTTGTATATTCTCCAAATTCTATAAAATATATGTACATT TTGATTCTTGCTATGGTACTTGTACGTATGATATTGTTGATCGATCCTGC CCGAGTCACCTTTTATATCACCAGACATGCCGATCATGAATATTTATTGA TGTGGGGTCGGAAATGCCTCACTGCTACCTTCAGACATATTATAATATCC TCTGAAAGAGTGTGACAAAATGAATGTATGAACACTACATATTTAAAGTC ATCTAGTGATATAAACCAAATGGAAATAACCTTGTAAGACCCAACCACAA AATAGTTATCCTGATAAACGGCTTAATGTTGAGCCGGACTAACAGAGTGT CTAGTATATAACAAAAATTAATGTATTTGTGTAACCATATTTTTTTTTTA TAGATTTAATTGTAGGAACGTTAAAATGACAAGCAGATAATATATGCTTT TGAATAAATGCAAATAAATATGAACATTTCCAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 354780..357209 | 3..2431 | 12085 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 460747..463181 | 3..2436 | 12125 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 468845..471279 | 3..2436 | 12135 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 354778..357209 | 1..2431 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ase-RA | 1..1461 | 212..1672 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ase-RA | 1..1461 | 212..1672 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ase-RA | 1..1461 | 212..1672 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ase-RA | 1..1461 | 212..1672 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ase-RA | 1..1461 | 212..1672 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ase-RA | 246..2677 | 1..2431 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ase-RA | 246..2677 | 1..2431 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ase-RA | 1..2430 | 3..2431 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ase-RA | 246..2677 | 1..2431 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ase-RA | 1..2430 | 3..2431 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 460745..463176 | 1..2431 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 460745..463176 | 1..2431 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 460745..463176 | 1..2431 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 354778..357209 | 1..2431 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 468843..471274 | 1..2431 | 99 | Plus |
Translation from 211 to 1671
> RE15472.pep MAALSFSPSPPPKENPKENPNPGIKTTLKPFGKITVHNVLSESGANALQQ HIANQNTIIRKIRDFGMLGAVQSAAASTTNTTPISSQRKRPLGESQKQNR HNQQNQQLSKTSVPAKKCKTNKKLAVERPPKAGTISHPHKSQSDQSFGTP GRKGLPLPQAVARRNARERNRVKQVNNGFALLREKIPEEVSEAFEAQGAG RGASKKLSKVETLRMAVEYIRSLEKLLGFDFPPLNSQGNSSGSGDDSFMF IKDEFDCLDEHFDDSLSNYEMDEQQTVQQTLSEDMLNPPQASDLLPSLTT LNGLQYIRIPGTNTYQLLTTDLLGDLSHEQKLEETAASGQLSRSPVPQKV VRSPCSSPVSPVASTELLLQTQTCATPLQQQVIKQEYVSTNISSSSNAQT SPQQQQQVQNLGSSPILPAFYDQEPVSFYDNVVLPGFKKEFSDILQQDQP NNTTAGCLSDESMIDAIDWWEAHAPKSNGACTNLSV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21452-PA | 483 | GF21452-PA | 1..319 | 1..302 | 926 | 68.7 | Plus |
Dana\GF21450-PA | 326 | GF21450-PA | 76..143 | 159..227 | 222 | 62.3 | Plus |
Dana\GF21449-PA | 415 | GF21449-PA | 26..95 | 160..227 | 212 | 62.9 | Plus |
Dana\GF21451-PA | 257 | GF21451-PA | 96..184 | 172..259 | 180 | 49.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\ase-PA | 484 | GG12785-PA | 1..484 | 1..486 | 2164 | 92.8 | Plus |
Dere\sc-PA | 335 | GG12783-PA | 87..154 | 159..227 | 223 | 62.3 | Plus |
Dere\ac-PA | 201 | GG12781-PA | 25..94 | 160..227 | 214 | 64.3 | Plus |
Dere\l(1)sc-PA | 256 | GG12784-PA | 40..148 | 89..227 | 175 | 44.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24345-PA | 574 | GH24345-PA | 56..567 | 29..478 | 980 | 54.4 | Plus |
Dgri\GH24340-PA | 378 | GH24340-PA | 115..182 | 159..227 | 221 | 62.3 | Plus |
Dgri\GH24339-PA | 252 | GH24339-PA | 57..131 | 155..227 | 218 | 60 | Plus |
Dgri\GH24341-PA | 284 | GH24341-PA | 46..169 | 89..233 | 191 | 44.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ase-PA | 486 | CG3258-PA | 1..486 | 1..486 | 2499 | 100 | Plus |
l(1)sc-PA | 257 | CG3839-PA | 25..167 | 96..247 | 222 | 40.1 | Plus |
sc-PA | 345 | CG3827-PA | 69..198 | 130..268 | 210 | 41.4 | Plus |
ac-PA | 201 | CG3796-PA | 25..94 | 160..227 | 203 | 64.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11000-PA | 664 | GI11000-PA | 60..404 | 29..327 | 720 | 57.4 | Plus |
Dmoj\GI11000-PA | 664 | GI11000-PA | 583..659 | 409..480 | 232 | 62.3 | Plus |
Dmoj\GI10998-PA | 361 | GI10998-PA | 99..166 | 159..227 | 220 | 62.3 | Plus |
Dmoj\GI10997-PA | 262 | GI10997-PA | 60..129 | 160..227 | 210 | 61.4 | Plus |
Dmoj\GI10999-PA | 266 | GI10999-PA | 50..162 | 88..227 | 173 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20381-PA | 293 | GL20381-PA | 1..245 | 1..215 | 604 | 62.9 | Plus |
Dper\GL20382-PA | 321 | GL20382-PA | 223..305 | 405..477 | 264 | 65.5 | Plus |
Dper\GL20377-PA | 225 | GL20377-PA | 29..98 | 160..227 | 216 | 64.3 | Plus |
Dper\GL20378-PA | 347 | GL20378-PA | 102..161 | 167..227 | 190 | 60.7 | Plus |
Dper\GL20379-PA | 264 | GL20379-PA | 74..178 | 150..259 | 189 | 53.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17007-PA | 619 | GA17007-PA | 521..603 | 405..477 | 273 | 66.7 | Plus |
Dpse\GA29095-PA | 371 | GA29095-PA | 107..174 | 159..227 | 221 | 62.3 | Plus |
Dpse\GA17691-PA | 226 | GA17691-PA | 29..98 | 160..227 | 216 | 64.3 | Plus |
Dpse\GA17723-PA | 264 | GA17723-PA | 74..178 | 150..259 | 189 | 53.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19064-PA | 449 | GM19064-PA | 1..449 | 1..486 | 2253 | 89.9 | Plus |
Dsec\GM19062-PA | 334 | GM19062-PA | 87..179 | 159..260 | 224 | 50 | Plus |
Dsec\GM19060-PA | 201 | GM19060-PA | 25..94 | 160..227 | 214 | 64.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16504-PA | 466 | GD16504-PA | 1..466 | 1..486 | 2374 | 93.2 | Plus |
Dsim\sc-PA | 334 | GD16501-PA | 87..179 | 159..260 | 224 | 50 | Plus |
Dsim\l(1)sc-PA | 257 | GD16503-PA | 79..149 | 154..227 | 170 | 63.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15598-PA | 616 | GJ15598-PA | 47..359 | 29..323 | 754 | 58.6 | Plus |
Dvir\GJ15598-PA | 616 | GJ15598-PA | 539..609 | 411..480 | 261 | 68.1 | Plus |
Dvir\sc-PA | 351 | GJ15596-PA | 96..189 | 159..260 | 222 | 51 | Plus |
Dvir\ac-PA | 220 | GJ15592-PA | 29..98 | 160..227 | 214 | 62.9 | Plus |
Dvir\GJ15597-PA | 284 | GJ15597-PA | 106..159 | 172..227 | 170 | 60.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25272-PA | 652 | GK25272-PA | 49..631 | 29..480 | 1037 | 50.6 | Plus |
Dwil\GK25270-PA | 377 | GK25270-PA | 129..220 | 159..260 | 223 | 50.5 | Plus |
Dwil\GK25269-PA | 236 | GK25269-PA | 30..99 | 160..227 | 214 | 64.3 | Plus |
Dwil\GK25271-PA | 280 | GK25271-PA | 55..166 | 91..227 | 177 | 46.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\ase-PA | 494 | GE16612-PA | 1..494 | 1..486 | 2155 | 91.1 | Plus |
Dyak\sc-PA | 334 | GE16610-PA | 87..154 | 159..227 | 223 | 62.3 | Plus |
Dyak\ac-PA | 201 | GE16609-PA | 25..94 | 160..227 | 214 | 64.3 | Plus |
Dyak\l(1)sc-PA | 256 | GE16611-PA | 78..148 | 154..227 | 168 | 63.5 | Plus |
Translation from 211 to 1671
> RE15472.hyp MAALSFSPSPPPKENPKENPNPGIKTTLKPFGKITVHNVLSESGANALQQ HIANQNTIIRKIRDFGMLGAVQSAAASTTNTTPISSQRKRPLGESQKQNR HNQQNQQLSKTSVPAKKCKTNKKLAVERPPKAGTISHPHKSQSDQSFGTP GRKGLPLPQAVARRNARERNRVKQVNNGFALLREKIPEEVSEAFEAQGAG RGASKKLSKVETLRMAVEYIRSLEKLLGFDFPPLNSQGNSSGSGDDSFMF IKDEFDCLDEHFDDSLSNYEMDEQQTVQQTLSEDMLNPPQASDLLPSLTT LNGLQYIRIPGTNTYQLLTTDLLGDLSHEQKLEETAASGQLSRSPVPQKV VRSPCSSPVSPVASTELLLQTQTCATPLQQQVIKQEYVSTNISSSSNAQT SPQQQQQVQNLGSSPILPAFYDQEPVSFYDNVVLPGFKKEFSDILQQDQP NNTTAGCLSDESMIDAIDWWEAHAPKSNGACTNLSV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ase-PA | 486 | CG3258-PA | 1..486 | 1..486 | 2499 | 100 | Plus |
l(1)sc-PA | 257 | CG3839-PA | 25..167 | 96..247 | 222 | 40.1 | Plus |
sc-PA | 345 | CG3827-PA | 69..198 | 130..268 | 210 | 41.4 | Plus |
ac-PA | 201 | CG3796-PA | 25..94 | 160..227 | 203 | 64.3 | Plus |