BDGP Sequence Production Resources |
Search the DGRC for RE16005
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 160 |
Well: | 5 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14147-RA |
Protein status: | RE16005.pep: gold |
Preliminary Size: | 468 |
Sequenced Size: | 776 |
Gene | Date | Evidence |
---|---|---|
CG14147 | 2001-12-17 | Blastp of sequenced clone |
CG14147 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14147 | 2008-04-29 | Release 5.5 accounting |
CG14147 | 2008-08-15 | Release 5.9 accounting |
CG14147 | 2008-12-18 | 5.12 accounting |
776 bp (776 high quality bases) assembled on 2001-12-17
GenBank Submission: AY071099
> RE16005.complete ACAGTCAATCGACAACAGTTCAGCAGACAAAGCGTAAGCTTAGCAATTGG ATAACCCCTCAACTTAAGCAAGGAATCTCTCAGAATGAAGTTCTTCGTGT GCATCTTGGCTGTGCTGGCTGTGGCCCAGGCTGCCCCAGGTCTTCTGCCC CATGTGGATAGCCATCATGGTTACCACCATGAGGAACTGCCTCATCTGCT GGACGCTGAGATCCATCATTCGGATGGCATCCATCTGGGACACAGTGCCG CTTTGGTGCACGATGATCACCATCTGAACCATCATTTGGATCATCATTTG GATCACCACCTGGTTGAGTCGCTGCCAACCACAGTGTACCACCATGAGCC ACTTCACTACCACTACGCTCGCCTGCACTCCGCTCCGGTGGTGCACCATC ATCACCATGACACCCACGCCGCCGTGGTGCATCACAGTACCCCGGCCCAC TTCGATGTCCACAGCCACTCGAACCTCCTGTCCTTCGCCAAGCACGCCCT GCACGGAAAGTACGGAAAGGTCAGGATCACCGAGACCCATTATTGAGAGA TTCCAAAAACATCCATTGTCCATAAAACCTCTGACTAGCTCCCTCATGGC TCATAATTTATTAGGTCAATAGTTAAGCTAACGAAAAATAACTCGATTAA ACGGGTGAGACAAGTTGAACAGATAAGCTCAGGATTTTTGTAAAAATAAA TATTTAAGTCAATTGTTAATACAGATTTATTTTGACTAAAGTCGTTTTAA TTTTTAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ivk | 5402 | Ivk IVK 5402bp | 155..214 | 550..609 | 111 | 65 | Plus |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 1012..1087 | 668..740 | 110 | 65.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 10963585..10963674 | 1..90 | 98 | -> | Plus |
chr3L | 10963743..10964407 | 91..755 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14147-RA | 1..462 | 85..546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14147-RA | 1..462 | 85..546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14147-RA | 1..462 | 85..546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14147-RA | 1..462 | 85..546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14147-RA | 1..462 | 85..546 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14147-RA | 1..755 | 1..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14147-RA | 1..755 | 1..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14147-RA | 7..761 | 1..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14147-RA | 1..755 | 1..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14147-RA | 7..761 | 1..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10972654..10972743 | 1..90 | 100 | -> | Plus |
3L | 10972812..10973476 | 91..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10972654..10972743 | 1..90 | 100 | -> | Plus |
3L | 10972812..10973476 | 91..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10972654..10972743 | 1..90 | 100 | -> | Plus |
3L | 10972812..10973476 | 91..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 10965754..10965843 | 1..90 | 100 | -> | Plus |
arm_3L | 10965912..10966576 | 91..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10965912..10966576 | 91..755 | 100 | Plus | |
3L | 10965754..10965843 | 1..90 | 100 | -> | Plus |
Translation from 84 to 545
> RE16005.pep MKFFVCILAVLAVAQAAPGLLPHVDSHHGYHHEELPHLLDAEIHHSDGIH LGHSAALVHDDHHLNHHLDHHLDHHLVESLPTTVYHHEPLHYHYARLHSA PVVHHHHHDTHAAVVHHSTPAHFDVHSHSNLLSFAKHALHGKYGKVRITE THY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10621-PA | 147 | GF10621-PA | 1..147 | 1..153 | 361 | 68.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15463-PA | 151 | GG15463-PA | 1..151 | 1..153 | 688 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14924-PA | 239 | GH14924-PA | 81..239 | 3..153 | 251 | 50.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14147-PA | 153 | CG14147-PA | 1..153 | 1..153 | 870 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11439-PA | 189 | GI11439-PA | 31..189 | 1..153 | 313 | 56.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15667-PA | 153 | GL15667-PA | 1..153 | 1..153 | 271 | 56.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12788-PA | 153 | GA12788-PA | 1..153 | 1..153 | 271 | 56.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25236-PA | 153 | GM25236-PA | 1..153 | 1..153 | 728 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14270-PA | 153 | GD14270-PA | 1..153 | 1..153 | 728 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13635-PA | 156 | GJ13635-PA | 1..156 | 1..153 | 241 | 52.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12485-PA | 229 | GK12485-PA | 196..229 | 120..153 | 154 | 91.2 | Plus |
Dwil\GK12485-PA | 229 | GK12485-PA | 1..102 | 1..91 | 141 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21774-PA | 151 | GE21774-PA | 1..151 | 1..153 | 693 | 96.1 | Plus |
Translation from 84 to 545
> RE16005.hyp MKFFVCILAVLAVAQAAPGLLPHVDSHHGYHHEELPHLLDAEIHHSDGIH LGHSAALVHDDHHLNHHLDHHLDHHLVESLPTTVYHHEPLHYHYARLHSA PVVHHHHHDTHAAVVHHSTPAHFDVHSHSNLLSFAKHALHGKYGKVRITE THY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14147-PA | 153 | CG14147-PA | 1..153 | 1..153 | 870 | 100 | Plus |