BDGP Sequence Production Resources |
Search the DGRC for RE16337
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 163 |
Well: | 37 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG9921-RB |
Protein status: | RE16337.pep: gold |
Preliminary Size: | 553 |
Sequenced Size: | 806 |
Gene | Date | Evidence |
---|---|---|
CG9921 | 2001-12-14 | Blastp of sequenced clone |
CG9921 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9921 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9921 | 2008-04-29 | Release 5.5 accounting |
CG9921 | 2008-08-15 | Release 5.9 accounting |
CG9921 | 2008-12-18 | 5.12 accounting |
806 bp (806 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071104
> RE16337.complete GTGGACAAATTAGTAGATGTGTAATTTTGAACGTTTCTTGATGTTTGTCG TTTTGGAAGTCGTGATAGTTCGAGAAAACTATCGCTTTATTAGTGTGAAC GCACGCACATCGTAAGCGTTGGTGTCATCTCCAATTGAATAATAGAATTT GACTTGCTTGATATTGTTTTACTAATATTGCCCGGGACTAAGAGCGATAT GTCGAACAAAATTGAAGTCTCGCTTCCGGAGGAGGAACTGGATTGGATAC AATTGCGCCAGGACCTGGGACCCGTTGCCGAGGTGGAAACGACCAAGGAG AAGTTGCAGCGCAAGATCAAGGAGAATCCGCTGGTTCCGTTGGGATGTTT GGCCACTACAGCGGCGCTCACAGCTGGCTTATACAACTTTCGCACTGGCA ATCGCAAGATGTCGCAGCTGATGATGCGAAGTCGTATCGCGGCTCAGGGA TTTACCGTTATGGCCCTAGTTGTCGGCGTCGTCATGACCTACACTGATAA AAAATAACTACAACGATATTATTATGAACCCAAATATATAGGCTGAATTT GCATTCAGTTGGATTCTGTTATTTTTTTTTTTTAGTCCCATGTTACAAAA AGCTAATACTAAGGGCTGCAAATTTGTATAAATATTTAAATATACGCTAA CCATTACATAGATGGTATCTAAAAGATGCCTATAGATAATACTTATAAAA TGTCTCAATTTATTGTAATCAAATGTGGGAAATCTTAAGGGGCTACTATT AATGTGATAGTTTTAGCTGTGATTAAAAAATAGTTTCAAACAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9921-RA | 804 | CG9921-RA | 1..792 | 4..794 | 3905 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\ISBu2 | 726 | Dbuz\ISBu2 ISBU2 726bp | 318..397 | 564..643 | 130 | 62.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16221007..16221453 | 344..791 | 99 | <- | Minus |
chrX | 16221537..16221851 | 30..343 | 99 | <- | Minus |
chrX | 16221994..16222021 | 1..29 | 93 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9921-RA | 1..309 | 199..507 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9921-RA | 1..309 | 199..507 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9921-RB | 1..309 | 199..507 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9921-RA | 1..309 | 199..507 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9921-RB | 1..309 | 199..507 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9921-RA | 1..788 | 4..791 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9921-RA | 1..788 | 4..791 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9921-RC | 226..985 | 29..787 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9921-RA | 1..788 | 4..791 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9921-RC | 226..985 | 29..787 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16331277..16331725 | 344..791 | 99 | <- | Minus |
X | 16331809..16332122 | 30..343 | 100 | <- | Minus |
X | 16332264..16332291 | 1..29 | 93 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16331277..16331725 | 344..791 | 99 | <- | Minus |
X | 16331809..16332122 | 30..343 | 100 | <- | Minus |
X | 16332264..16332291 | 1..29 | 93 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16331277..16331725 | 344..791 | 99 | <- | Minus |
X | 16331809..16332122 | 30..343 | 100 | <- | Minus |
X | 16332264..16332291 | 1..29 | 93 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16225310..16225758 | 344..791 | 99 | <- | Minus |
arm_X | 16225842..16226155 | 30..343 | 100 | <- | Minus |
arm_X | 16226297..16226324 | 1..29 | 93 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16339375..16339823 | 344..791 | 99 | <- | Minus |
X | 16339907..16340220 | 30..343 | 100 | <- | Minus |
X | 16340362..16340389 | 1..29 | 93 | Minus |
Translation from 198 to 506
> RE16337.hyp MSNKIEVSLPEEELDWIQLRQDLGPVAEVETTKEKLQRKIKENPLVPLGC LATTAALTAGLYNFRTGNRKMSQLMMRSRIAAQGFTVMALVVGVVMTYTD KK*
Translation from 198 to 506
> RE16337.pep MSNKIEVSLPEEELDWIQLRQDLGPVAEVETTKEKLQRKIKENPLVPLGC LATTAALTAGLYNFRTGNRKMSQLMMRSRIAAQGFTVMALVVGVVMTYTD KK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19615-PA | 102 | GF19615-PA | 1..102 | 1..102 | 488 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19329-PA | 102 | GG19329-PA | 1..102 | 1..102 | 519 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12463-PA | 102 | GH12463-PA | 1..102 | 1..102 | 457 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9921-PC | 102 | CG9921-PC | 1..102 | 1..102 | 510 | 100 | Plus |
CG9921-PB | 102 | CG9921-PB | 1..102 | 1..102 | 510 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11141-PA | 102 | GI11141-PA | 1..102 | 1..102 | 460 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15894-PA | 104 | GL15894-PA | 1..102 | 1..102 | 477 | 86.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22125-PA | 104 | GA22125-PA | 1..102 | 1..102 | 477 | 86.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13407-PA | 102 | GM13407-PA | 1..102 | 1..102 | 532 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15754-PA | 102 | GD15754-PA | 1..102 | 1..102 | 532 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18698-PA | 102 | GJ18698-PA | 1..102 | 1..102 | 460 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10064-PA | 102 | GK10064-PA | 1..102 | 1..102 | 486 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15976-PA | 102 | GE15976-PA | 1..102 | 1..102 | 528 | 98 | Plus |