RE16764.complete Sequence
2253 bp (2253 high quality bases) assembled on 2002-05-09
GenBank Submission: AY102697
> RE16764.complete
AGTTGAAATCGAGATAACAAACCGACAAGCCGACCGAGCGGGAGCTGTCT
CGCTTTTTTTAAAAATTTGCACCAGCAAAAATCCAAATAAATTAGCAGAG
TGCCAGTGAAGTAAGTGAGCGTGAGTGCGCCAAGTCAAAATATAAATATT
GTCATTTACGCCGTTTCAAAATATATTTCCGCGAGCATTTCTCGAATCGA
AAGTGAACCCAAAATATATTATTCCAAGTGAAAAGGACTAGCCCAAAGAT
ACACACACACACACACAGGAAAAATACCGACAGATCTGTAGTCCTTTTCG
AGTTTTCCCGTGAGTGCAACAAATACAGACACACCACACACACACTCGTT
CGACTTTCAATATGGCGGATGTCCTGGAGAAAAGCTCACTGCTGGATGCT
GTGCCACCACTAGGCGACCCCCACCCACCGCTGCCCCACCAGCAGCTGCA
ACAGGAAGCAGCAGCAGCAGCAGCAGCAAATGCCGCACCACCAGCACCAC
CGCAGCAGCAACAACCACCACCCCATCAGCTGCAGCAGCAGCAGCCGCAA
CAACAGCAACTGCAACAGAAGCCAGCAAATGCGAGGGCTAATCAGGATCA
AAAAGAGGGCGACAATGACAGCGGCGTGGATGAGTCCACTCAGGAGAAGG
ATCGCAACGGACCCAACTCGCCCAGTTCGCCCGTAAAAACGCCCACATCG
ACCTCATCGAAGCCGGACAAGTCGGGCACGTCGCGTCCACCGAGTGCCAC
GCCCTCGAACAAGTCAGCCCCCAAATCGCGCAGCGCCTCCAAGAACCGCT
TGCTCCTCAAGACCCCAGAGCCCGAGCCAGTGAAGAAAGTTCCAATGAAC
AAGGTACAAGTCGGACATGCGCCTTCACCCAATCTGAAGGCGGTACGCTC
CAAGATCGGATCCCTGGACAATGCCACCTATAAGCCGGGTGGCGGCCACG
TGAAAATCGAGTCCAAGAAGATCGACATCAAGGCGGCACCGCGCATCGAG
GCCAAGAACGACAAGTACATGCCAAAGGGCGGCGAGAAGAAGATAGTTAC
AACAAAGTTGCAGTGGAACGCCAAGTCCAAAATCGGTTCGCTGGAGAATG
CCGCCCACAAGCCGGGAGGCGGGGACAAGAAGATCGAGACCCTGAAGATG
GACTTCAAGGACAAGGCCAAGCCGAAGGTGGGCTCGACGGCCAATGTGAA
ACATCAGCCGGGTGGCGGAGACATCAAGATCCAAACGCAAAAACTAGAAA
TTAAGGCACAAAGCAAAGTTGGCTCTTTGGATAATGTAAAGCACAAGCCC
GGTGGCGGTGAGAAGAAGATTTTCGATGATAAGGATTATTTGAAAAATGT
TGAACACTCTGTTGCACTGACAACACCACCAACACAGAGTCCACTACCAT
CCATGACGGCTTCTGGCGCTGATGAAAATTTAAATCAACAAAGCTAAATG
CCGAAATGCATGTCGAGCTGTATCTGAAACTGAATCTGAAACTGACTCTT
TCTTTGCAAGCTAAGATCAACAAAAGTGAAATATGAGCAGCTAATTTGAA
ACGTACTATCTAAGCAAAATCCACACAATGCAAAACGAGAGTTATGCGAT
AATTTCCACACACCCAGATAATTCACAAGCCAGTAAATGCGATCAGATCA
ATTCGATAGAGGTGCAAGCACGCAATGAGATGCAGATACTCGTACATCTA
CACAACCACCCCACATAGAAGCGGTATTTGGTATACAATCGAAAGTATAT
TTGACTAGTTGAGCAATGCACTCTTTATCATCAGATAGCAGACATGAATT
ATATATCTCAATGTATTACCAGAACTTCATATATACATACAAATCTATAT
ATATATATATACATATATAAATAAAAGTATCTAAATATTTAAGCAAATTA
TACAAGAAACGTACGAATAAAGTGTATGCTTAGTTGAAAATGTTACCACT
TGACGTCTAAATGTTAAACGACTAAGATAATGCAACCATTTAGATACTTT
TGCGACCAGTGAAAACCAAAAACCAAACCCAACTGAACAGATACGAAACA
AAAAACAAAACGAACCGAACCGAACAGAAGAGATAATAACACGTATAAGC
ATATTTTTACTATTAATTTGTATCTTATTAGTCAAGCGCATCATTCTCAC
GATTTATTTACACCCTGTTACAAAATGTAAGAACAATGGCAAAATTTAAG
CAAATAAACAAACAAAAAAAACGTTTTTTTCATTTACAAAAAAAAAAAAA
AAA
RE16764.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:09:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tau-RA | 2392 | tau-RA | 171..2392 | 1..2220 | 11055 | 99.9 | Plus |
nc_19588.a | 464 | nc_19588.a | 282..464 | 1388..1570 | 915 | 100 | Plus |
CG34294-RA | 911 | CG34294-RA | 1..158 | 2084..2241 | 775 | 99.3 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:58:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 23463552..23464410 | 2237..1381 | 4185 | 99.4 | Minus |
chr3R | 27901430 | chr3R | 23479120..23479720 | 605..1 | 2870 | 98.7 | Minus |
chr3R | 27901430 | chr3R | 23468923..23469127 | 1042..838 | 1025 | 100 | Minus |
chr3R | 27901430 | chr3R | 23469218..23469409 | 839..648 | 960 | 100 | Minus |
chr3R | 27901430 | chr3R | 23468124..23468311 | 1228..1041 | 940 | 100 | Minus |
chr3R | 27901430 | chr3R | 23466721..23466881 | 1387..1227 | 805 | 100 | Minus |
chr3R | 27901430 | chr3R | 23470446..23470492 | 650..604 | 235 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:38:12 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:58:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27640639..27641501 | 2241..1381 | 4220 | 99.5 | Minus |
3R | 32079331 | 3R | 27656206..27656810 | 605..1 | 3025 | 100 | Minus |
3R | 32079331 | 3R | 27646041..27646245 | 1042..838 | 1025 | 100 | Minus |
3R | 32079331 | 3R | 27646336..27646527 | 839..648 | 960 | 100 | Minus |
3R | 32079331 | 3R | 27645225..27645412 | 1228..1041 | 940 | 100 | Minus |
3R | 32079331 | 3R | 27643815..27643975 | 1387..1227 | 805 | 100 | Minus |
3R | 32079331 | 3R | 27647564..27647610 | 650..604 | 235 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:40:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 27381470..27382332 | 2241..1381 | 4230 | 99.5 | Minus |
3R | 31820162 | 3R | 27397037..27397641 | 605..1 | 3025 | 100 | Minus |
3R | 31820162 | 3R | 27386872..27387076 | 1042..838 | 1025 | 100 | Minus |
3R | 31820162 | 3R | 27387167..27387358 | 839..648 | 960 | 100 | Minus |
3R | 31820162 | 3R | 27386056..27386243 | 1228..1041 | 940 | 100 | Minus |
3R | 31820162 | 3R | 27384646..27384806 | 1387..1227 | 805 | 100 | Minus |
3R | 31820162 | 3R | 27388395..27388441 | 650..604 | 235 | 100 | Minus |
3R | 31820162 | 3R | 27388796..27388861 | 567..499 | 185 | 86.9 | Minus |
Blast to na_te.dros performed on 2019-03-16 20:58:39 has no hits.
RE16764.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:00:11 Download gff for
RE16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 23463552..23463709 | 2080..2237 | 100 | == | Minus |
chr3R | 23463769..23464403 | 1388..2020 | 92 | <- | Minus |
chr3R | 23466721..23466879 | 1229..1387 | 100 | <- | Minus |
chr3R | 23468124..23468309 | 1043..1228 | 100 | <- | Minus |
chr3R | 23468923..23469125 | 840..1042 | 100 | <- | Minus |
chr3R | 23469218..23469407 | 650..839 | 100 | <- | Minus |
chr3R | 23470447..23470490 | 606..649 | 100 | <- | Minus |
chr3R | 23479120..23479163 | 562..605 | 100 | == | Minus |
chr3R | 23479292..23479720 | 1..433 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:35:02 Download gff for
RE16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RA | 1..1086 | 362..1447 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:52:59 Download gff for
RE16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RA | 1..1086 | 362..1447 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:31:11 Download gff for
RE16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RA | 1..1086 | 362..1447 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:45:32 Download gff for
RE16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RA | 1..1086 | 362..1447 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:01:39 Download gff for
RE16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RA | 1..1086 | 362..1447 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:35:02 Download gff for
RE16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RA | 1..2092 | 1..2090 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:52:59 Download gff for
RE16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RA | 1..2092 | 1..2090 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:31:11 Download gff for
RE16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RA | 5..2243 | 1..2237 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:45:33 Download gff for
RE16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RA | 1..2092 | 1..2090 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:01:39 Download gff for
RE16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RA | 5..2243 | 1..2237 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:00:11 Download gff for
RE16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27646336..27646525 | 650..839 | 100 | <- | Minus |
3R | 27647565..27647608 | 606..649 | 100 | <- | Minus |
3R | 27640643..27641494 | 1388..2237 | 99 | <- | Minus |
3R | 27643815..27643973 | 1229..1387 | 100 | <- | Minus |
3R | 27645225..27645410 | 1043..1228 | 100 | <- | Minus |
3R | 27646041..27646243 | 840..1042 | 100 | <- | Minus |
3R | 27656206..27656810 | 1..605 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:00:11 Download gff for
RE16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27646336..27646525 | 650..839 | 100 | <- | Minus |
3R | 27647565..27647608 | 606..649 | 100 | <- | Minus |
3R | 27640643..27641494 | 1388..2237 | 99 | <- | Minus |
3R | 27643815..27643973 | 1229..1387 | 100 | <- | Minus |
3R | 27645225..27645410 | 1043..1228 | 100 | <- | Minus |
3R | 27646041..27646243 | 840..1042 | 100 | <- | Minus |
3R | 27656206..27656810 | 1..605 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:00:11 Download gff for
RE16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27646336..27646525 | 650..839 | 100 | <- | Minus |
3R | 27647565..27647608 | 606..649 | 100 | <- | Minus |
3R | 27640643..27641494 | 1388..2237 | 99 | <- | Minus |
3R | 27643815..27643973 | 1229..1387 | 100 | <- | Minus |
3R | 27645225..27645410 | 1043..1228 | 100 | <- | Minus |
3R | 27646041..27646243 | 840..1042 | 100 | <- | Minus |
3R | 27656206..27656810 | 1..605 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:31:11 Download gff for
RE16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 23466365..23467216 | 1388..2237 | 99 | <- | Minus |
arm_3R | 23469537..23469695 | 1229..1387 | 100 | <- | Minus |
arm_3R | 23470947..23471132 | 1043..1228 | 100 | <- | Minus |
arm_3R | 23471763..23471965 | 840..1042 | 100 | <- | Minus |
arm_3R | 23472058..23472247 | 650..839 | 100 | <- | Minus |
arm_3R | 23473287..23473330 | 606..649 | 100 | <- | Minus |
arm_3R | 23481928..23482532 | 1..605 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:18:00 Download gff for
RE16764.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27386056..27386241 | 1043..1228 | 100 | <- | Minus |
3R | 27381474..27382325 | 1388..2237 | 99 | <- | Minus |
3R | 27384646..27384804 | 1229..1387 | 100 | <- | Minus |
3R | 27397037..27397641 | 1..605 | 100 | | Minus |
3R | 27386872..27387074 | 840..1042 | 100 | <- | Minus |
3R | 27387167..27387356 | 650..839 | 100 | <- | Minus |
3R | 27388396..27388439 | 606..649 | 100 | <- | Minus |
RE16764.hyp Sequence
Translation from 361 to 1446
> RE16764.hyp
MADVLEKSSLLDAVPPLGDPHPPLPHQQLQQEAAAAAAANAAPPAPPQQQ
QPPPHQLQQQQPQQQQLQQKPANARANQDQKEGDNDSGVDESTQEKDRNG
PNSPSSPVKTPTSTSSKPDKSGTSRPPSATPSNKSAPKSRSASKNRLLLK
TPEPEPVKKVPMNKVQVGHAPSPNLKAVRSKIGSLDNATYKPGGGHVKIE
SKKIDIKAAPRIEAKNDKYMPKGGEKKIVTTKLQWNAKSKIGSLENAAHK
PGGGDKKIETLKMDFKDKAKPKVGSTANVKHQPGGGDIKIQTQKLEIKAQ
SKVGSLDNVKHKPGGGEKKIFDDKDYLKNVEHSVALTTPPTQSPLPSMTA
SGADENLNQQS*
RE16764.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:45:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tau-PB | 361 | CG45110-PB | 1..361 | 1..361 | 1877 | 100 | Plus |
tau-PA | 361 | CG45110-PA | 1..361 | 1..361 | 1877 | 100 | Plus |
tau-PM | 367 | CG45110-PM | 1..367 | 1..361 | 1860 | 98.4 | Plus |
tau-PC | 349 | CG45110-PC | 1..342 | 1..342 | 1782 | 100 | Plus |
tau-PF | 403 | CG45110-PF | 1..342 | 1..342 | 1782 | 100 | Plus |
RE16764.pep Sequence
Translation from 361 to 1446
> RE16764.pep
MADVLEKSSLLDAVPPLGDPHPPLPHQQLQQEAAAAAAANAAPPAPPQQQ
QPPPHQLQQQQPQQQQLQQKPANARANQDQKEGDNDSGVDESTQEKDRNG
PNSPSSPVKTPTSTSSKPDKSGTSRPPSATPSNKSAPKSRSASKNRLLLK
TPEPEPVKKVPMNKVQVGHAPSPNLKAVRSKIGSLDNATYKPGGGHVKIE
SKKIDIKAAPRIEAKNDKYMPKGGEKKIVTTKLQWNAKSKIGSLENAAHK
PGGGDKKIETLKMDFKDKAKPKVGSTANVKHQPGGGDIKIQTQKLEIKAQ
SKVGSLDNVKHKPGGGEKKIFDDKDYLKNVEHSVALTTPPTQSPLPSMTA
SGADENLNQQS*
RE16764.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:08:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF18699-PA | 351 | GF18699-PA | 1..351 | 1..361 | 1473 | 85 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:08:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG12102-PA | 354 | GG12102-PA | 1..354 | 1..361 | 1752 | 97 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:08:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH21637-PA | 367 | GH21637-PA | 1..367 | 1..361 | 1369 | 80.7 | Plus |
Dgri\GH19669-PA | 264 | GH19669-PA | 48..245 | 94..290 | 904 | 90.4 | Plus |
Dgri\GH19669-PA | 264 | GH19669-PA | 132..213 | 237..320 | 206 | 54.8 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:19:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tau-PB | 361 | CG45110-PB | 1..361 | 1..361 | 1877 | 100 | Plus |
tau-PA | 361 | CG45110-PA | 1..361 | 1..361 | 1877 | 100 | Plus |
tau-PM | 367 | CG45110-PM | 1..367 | 1..361 | 1860 | 98.4 | Plus |
tau-PN | 375 | CG45110-PN | 1..345 | 1..345 | 1783 | 99.4 | Plus |
tau-PF | 403 | CG45110-PF | 1..342 | 1..342 | 1782 | 100 | Plus |
tau-PC | 349 | CG45110-PC | 1..342 | 1..342 | 1782 | 100 | Plus |
tau-PJ | 308 | CG45110-PJ | 1..308 | 1..361 | 1539 | 85.3 | Plus |
tau-PI | 350 | CG45110-PI | 1..289 | 1..289 | 1508 | 100 | Plus |
tau-PG | 717 | CG45110-PG | 316..717 | 15..361 | 1479 | 76.8 | Plus |
tau-PL | 278 | CG45110-PL | 8..278 | 91..361 | 1376 | 98.2 | Plus |
tau-PK | 278 | CG45110-PK | 8..278 | 91..361 | 1376 | 98.2 | Plus |
tau-PH | 288 | CG45110-PH | 1..227 | 1..227 | 1182 | 100 | Plus |
tau-PE | 93 | CG45110-PE | 1..86 | 1..86 | 431 | 95.3 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:08:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI10747-PA | 359 | GI10747-PA | 78..359 | 82..361 | 1234 | 92.9 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:08:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL13771-PA | 686 | GL13771-PA | 407..686 | 82..361 | 1303 | 94.3 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:08:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA15971-PA | 361 | GA15971-PA | 1..361 | 1..361 | 1380 | 84.6 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:08:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM16331-PA | 359 | GM16331-PA | 1..359 | 1..361 | 1822 | 99.4 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:08:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ10689-PA | 367 | GJ10689-PA | 1..367 | 1..361 | 1378 | 84.2 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:09:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK11325-PA | 357 | GK11325-PA | 1..357 | 1..361 | 1352 | 79.1 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:09:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE10550-PA | 362 | GE10550-PA | 1..362 | 1..361 | 1806 | 98.9 | Plus |