Clone RE16782 Report

Search the DGRC for RE16782

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:167
Well:82
Vector:pFlc-1
Associated Gene/TranscriptScm-RA
Protein status:RE16782.pep: gold
Preliminary Size:4054
Sequenced Size:3779

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9495 2002-01-01 Sim4 clustering to Release 2
CG9495 2002-07-13 Blastp of sequenced clone
CG9495 2003-01-01 Sim4 clustering to Release 3
Scm 2008-04-29 Release 5.5 accounting
Scm 2008-08-15 Release 5.9 accounting
Scm 2008-12-18 5.12 accounting

Clone Sequence Records

RE16782.complete Sequence

3779 bp (3779 high quality bases) assembled on 2002-07-13

GenBank Submission: BT001565

> RE16782.complete
ACTAGAAAAACAAATATGGCGGAACCGAGCGTAAAAGTAAAAAAAGTCTA
ACATTTTGGAGTTTAAGCGACTCAAAATCATCTAATTTCGGATTGAAACC
GAGTAACAAGATCCACGCAGCGCTCTAAATATAAAGCTCGATATTTGGTG
AACCAGAAACTAATTGTGCGGCTCGCGTTTGTTTTCGTTGGGTGATGCGA
TGCGATTTGGCCACCAATTTGTTATTACGTGACCTCAAGAACGCCGCAAA
ATTTCGCCAGGCCAAATCGAAAGAAATCGGAAAGTTAGTGCTGCAAAACA
AAACTTGCTATTGGTGGCTAATGATTCAAGGCAGCCGCAATGCGATTTGA
CCGCCGGATCGGAACACACGAAATCGAAATCGCCTGAGATGCCAAGGGGC
TTGCCGGCGCGAATCAGCAAGTGCGACTACTAGGACAGCCACGCGAGAAA
CCATGTCGGGCGGACGTGATAGCAGTACCAGTAGCGGGAGCAATTCTGCT
GCGCCAGGGGCCAGTACGAATGCCACCTCCTCCGCATCCGCATCCGCCTC
CTCCACATCCACATCCGCATCCCCTGGAAGTACAACATCGCCCGCGTCCA
CGCAACGGCAACGAGGTAGACCGGCCAAACGAGCCACATGCACCTGGTGC
GGCGAGGGCAAGCTACCGCTGCAGTACGTCCTGCCCACGCAGACCGGCAA
GAAGGAGTTCTGCTCGGAAACATGCATTGCCGAGTTCCGCAAGGCGTACA
GCAAGGGGGCGTGCACCCAGTGCGACAACGTCATCCGCGATGGGGCGCCC
AACAAGGAGTTCTGCTCGATCATGTGCATGAACAAGCACCAGAAGAAGAA
CTGCTCGACCAGGCACAGCGGCGGATCGGCATCGGGCAAGGGTCTGGCGG
AAAGCGAGCGCAAGTTGCTGGCCAGTGGAGCGCCCGCACCAACGGGGCCC
TTTCAATACGAGAGCTTCCACGTCTTCGACTGGGATGCCTATCTAGAGGA
AACGGGTAGCGAAGCTGCTCCTGCAAAATGTTTCAAACAGGCTCAGAATC
CTCCCAACAATGATTTTAAAATCGGAATGAAGCTGGAGGCTTTGGATCCG
CGCAACGTCACTTCCACCTGCATTGCCACCGTGGTCGGAGTGCTTGGCTC
CAGACTGCGGCTACGCCTGGATGGAAGTGACTCCCAGAATGACTTTTGGC
GGCTGGTCGATTCTACGGAGATCCATGCTATTGGACACTGTGAAAAGAAC
GGTGGCATGCTGCAGCCGCCTCTGGGATTCCGCATGAACGCATCCAGCTG
GCCCGGCTATCTGTGCAAGATCCTCAACAATGCCATGGTGGCGCCAGAAG
AGATCTTCCAGCCAGAGCCGCCAGAGCCAGAAGAAAACCTGTTCAAGGTG
GGCCAGAAACTCGAGGCTGTCGACAAGAAGAACCCGCAGCTCATCTGCTG
TGCAACAGTAGATGCAATCAAGGATGATCAGATCCATGTAACATTCGATG
GTTGGCGAGGGGCATTCGACTACTGGTGCAATTACCGATCGCGTGACATT
TTTCCCGCCGGCTGGTGCGCTAGAAGTTGTCATCCCATGCAGCCACCGGG
CCATAAATCGCGCATGGACTCCAGCTCTAGCAAACAGCGATGCCCTCGAC
CCCGCTACACTGTTGTAGCTGAGTCCGAGGCTATGGTTCCCGCTTCCCCT
GCCACAGCCCACTTCCATCCGAACTGCAAGGGCGGTCCGTTCATCAACAA
TTCCAAACTGCCCTGCATGGTGACGGGACCCACCTACCAAACGCTGGCCA
AGCTTTGCCTGCAGGAGGTTTTAGCTGCCAGCACGGATACGCAACAGCTC
TCAAAGTTGCTGTTTGCCCTGGAAGGAGATGTTCATATCGTGACGGCAGC
GGGGAAAAATTTCACAGTAAAAATACCATCGCCAATGCGAATGAAGGATG
ACGAAAGCCTCGCCCAATTCATCGAAACGCTGTGCACTACATGCCGGGCA
TGTGCGAATCTCATTTCCTTGGTCCACGAGACGGAGGAGTGCAAGAAGTG
CGCCAATAGTCGGAAGCGTCAACTGACTCAGTCAGCCACACCGCCTTCCT
CGCCAGTGCTCGCCGACAAGCGAAACCGTCAATCCAACTCGGCAACGACA
TCACCCTCTGAGAAGATTATCAAGCAGGAATTGGCTGTCAAATCGCCAGT
GGAGTCCAAGTCGAAAACTTCGACGAACAATGGCAAGGAGCCTGCAAGCC
AGCAAAACAGCAATCACAGTCTCAACAATAACAACAACAGTGCCAGCAAG
TCCAGCAACAAGGTGGTCATCAAATCGGAGCCCAACGGAGCGAACGCGCA
GACTTCCTCCACAACGCAGGCTCTGCGCAAAGTACGCTTCCAACACCACG
CAAACACGAATACGAATAGCTCTGCGACAAACGGAAACCAGGATACGAGC
CAGACCACGCACGTATCTACCAGCCATTGCAGCAGCTCGTCAACGTCGTC
CAGCACGAGCCTAGCCGGAGGATCGGCGAACACCAGCACAATTGGCAAAT
ACCTGGCACCTCTTGTGGCAGAAGTTCATCCAGAGCAGGCCAATGTAAAG
CCCTCGAATAGCTACTACAAGAGTCCGACGACGCTCTCGTCAAGCGCCTC
GTTGCCGACATCCGTGTCCACGCCGTTCACGGGCTGCCAGTCAGCCTCGT
CCACTGCACTGGCTGCAGGTGGAGTTACAGCGGCTAAGGCGGCCACCGCG
CCGGCTGGAGCAGCGGCAACTGCGGGAGCTTCTCCGAGCTACACCGCGAT
TACCTCACCCGTGAGCACGCCCACTTCTGCTTTGGCAAACTCACATCTGC
GGTCGCAGCCGATCGACTGGACCATCGAAGAGGTGATCCAGTACATCGAG
AGCAACGACAACTCCCTTGCAGTTCATGGTGATCTCTTCCGAAAGCACGA
AATCGATGGTAAAGCTTTATTATTGCTAAATTCAGAGATGATGATGAAGT
ACATGGGCCTGAAGCTAGGACCAGCCTTAAAAATCTGCAATTTAGTCAAT
AAGGTCAATGGTCGTCGAAATAATCTGGCACTCTAAACAGAAAAACATTA
AGTTTCAGGCAGCGGACTCGGTTCGGGTTTGACTTATATAGAAATTGTTA
ACAAATTAGTACCTCCCTTTAACGTAAAGCAAAGCAAACATGAACGATAT
TCATAGATGTGTTATGTGTTGGCCATTCATGAAGAAAAAACCCCTACCCT
ATTTTATTATATTGATAATATAAAACACGCTATAACAAATGTAATCGCGA
AGACATGAAATTCCCTATACAAAATCAATCGCATAACAAATTATACACAG
TCAAGCTCCGGTTTTCAAAACCATTATTATTAATTTTTTTCCAACTGCTC
GTGATTCTTTTTTTGGAATACACATTTACAAATTGATTTATTTAGACAAA
ATTATTATACTTGAATTAGGAATTTTTATAGGTTTATTCAAATTTACCCA
GTCAAAGGAGTGGAGTATTCGTACACACACAATAATTAGTTTATCCATCT
ATTTCGAAAAATGTGAAATAGTTCTCAATTGGACACAAAATGATTCGACT
TTTTCGAAAACTGGAGCTCGGCTACCAAAATCGCAATGCACATACATTAT
ATTTATTACACATAAAAACACGCACATTAGACACCAAAATCTATCCGACA
CAAAAGAAATGATAATTAACTTTAGAATAGGCGAGAAAATAAAAACCAAT
ATTAAATGATTGTAAAAAAAAAAAAAAAA

RE16782.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:43:33
Subject Length Description Subject Range Query Range Score Percent Strand
Scm-RA 4153 Scm-RA 39..3802 1..3764 18805 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:36:13
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 5460350..5461382 2949..1917 5165 100 Minus
chr3R 27901430 chr3R 5462423..5463421 999..1 4935 99.6 Minus
chr3R 27901430 chr3R 5461446..5462367 1918..997 4610 100 Minus
chr3R 27901430 chr3R 5459475..5460289 3763..2949 4075 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:38:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:36:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9634536..9635568 2949..1917 5165 100 Minus
3R 32079331 3R 9636609..9637607 999..1 4980 99.9 Minus
3R 32079331 3R 9635632..9636553 1918..997 4610 100 Minus
3R 32079331 3R 9633660..9634475 3764..2949 4080 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:16:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 9375367..9376399 2949..1917 5165 100 Minus
3R 31820162 3R 9377440..9378438 999..1 4980 99.8 Minus
3R 31820162 3R 9376463..9377384 1918..997 4610 100 Minus
3R 31820162 3R 9374491..9375306 3764..2949 4080 100 Minus
Blast to na_te.dros performed 2019-03-16 12:36:12
Subject Length Description Subject Range Query Range Score Percent Strand
micropia 5461 micropia DMDM11 5461bp 3141..3320 3040..3217 165 57.7 Plus
gypsy5 7369 gypsy5 GYPSY5 7369bp 504..650 3618..3763 146 60 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2902..2984 2226..2311 143 67.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2267..2381 2214..2323 139 61.7 Plus
Dbif\P-element_O 2986 Dbif\P-element_O P_O 2986bp Derived from X71634. 2619..2713 3404..3500 129 60.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2332..2423 2216..2311 126 66 Plus
Doc3-element 4740 Doc3-element DOC3 4740bp 484..548 2247..2311 118 64.6 Plus

RE16782.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:37:05 Download gff for RE16782.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 5459475..5460289 2949..3763 100 <- Minus
chr3R 5460351..5461382 1917..2948 100 <- Minus
chr3R 5461448..5462365 999..1916 100 <- Minus
chr3R 5462424..5463421 1..998 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:58:22 Download gff for RE16782.complete
Subject Subject Range Query Range Percent Splice Strand
Scm-RA 1..2634 453..3086 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:17:02 Download gff for RE16782.complete
Subject Subject Range Query Range Percent Splice Strand
Scm-RA 1..2634 453..3086 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 15:04:47 Download gff for RE16782.complete
Subject Subject Range Query Range Percent Splice Strand
Scm-RA 1..2634 453..3086 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:08:14 Download gff for RE16782.complete
Subject Subject Range Query Range Percent Splice Strand
Scm-RA 1..2634 453..3086 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:49:24 Download gff for RE16782.complete
Subject Subject Range Query Range Percent Splice Strand
Scm-RA 1..2634 453..3086 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:41:14 Download gff for RE16782.complete
Subject Subject Range Query Range Percent Splice Strand
Scm-RA 1..3763 1..3763 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:17:02 Download gff for RE16782.complete
Subject Subject Range Query Range Percent Splice Strand
Scm-RA 1..3763 1..3763 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:04:47 Download gff for RE16782.complete
Subject Subject Range Query Range Percent Splice Strand
Scm-RA 1..3763 1..3763 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:08:15 Download gff for RE16782.complete
Subject Subject Range Query Range Percent Splice Strand
Scm-RA 1..3763 1..3763 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:49:24 Download gff for RE16782.complete
Subject Subject Range Query Range Percent Splice Strand
Scm-RA 5..3767 1..3763 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:37:05 Download gff for RE16782.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9633661..9634475 2949..3763 100 <- Minus
3R 9634537..9635568 1917..2948 100 <- Minus
3R 9635634..9636551 999..1916 100 <- Minus
3R 9636610..9637607 1..998 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:37:05 Download gff for RE16782.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9633661..9634475 2949..3763 100 <- Minus
3R 9634537..9635568 1917..2948 100 <- Minus
3R 9635634..9636551 999..1916 100 <- Minus
3R 9636610..9637607 1..998 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:37:05 Download gff for RE16782.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9633661..9634475 2949..3763 100 <- Minus
3R 9634537..9635568 1917..2948 100 <- Minus
3R 9635634..9636551 999..1916 100 <- Minus
3R 9636610..9637607 1..998 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:04:47 Download gff for RE16782.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5459383..5460197 2949..3763 100 <- Minus
arm_3R 5460259..5461290 1917..2948 100 <- Minus
arm_3R 5461356..5462273 999..1916 100 <- Minus
arm_3R 5462332..5463329 1..998 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:40:08 Download gff for RE16782.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9374492..9375306 2949..3763 100 <- Minus
3R 9375368..9376399 1917..2948 100 <- Minus
3R 9376465..9377382 999..1916 100 <- Minus
3R 9377441..9378438 1..998 99   Minus

RE16782.pep Sequence

Translation from 452 to 3085

> RE16782.pep
MSGGRDSSTSSGSNSAAPGASTNATSSASASASSTSTSASPGSTTSPAST
QRQRGRPAKRATCTWCGEGKLPLQYVLPTQTGKKEFCSETCIAEFRKAYS
KGACTQCDNVIRDGAPNKEFCSIMCMNKHQKKNCSTRHSGGSASGKGLAE
SERKLLASGAPAPTGPFQYESFHVFDWDAYLEETGSEAAPAKCFKQAQNP
PNNDFKIGMKLEALDPRNVTSTCIATVVGVLGSRLRLRLDGSDSQNDFWR
LVDSTEIHAIGHCEKNGGMLQPPLGFRMNASSWPGYLCKILNNAMVAPEE
IFQPEPPEPEENLFKVGQKLEAVDKKNPQLICCATVDAIKDDQIHVTFDG
WRGAFDYWCNYRSRDIFPAGWCARSCHPMQPPGHKSRMDSSSSKQRCPRP
RYTVVAESEAMVPASPATAHFHPNCKGGPFINNSKLPCMVTGPTYQTLAK
LCLQEVLAASTDTQQLSKLLFALEGDVHIVTAAGKNFTVKIPSPMRMKDD
ESLAQFIETLCTTCRACANLISLVHETEECKKCANSRKRQLTQSATPPSS
PVLADKRNRQSNSATTSPSEKIIKQELAVKSPVESKSKTSTNNGKEPASQ
QNSNHSLNNNNNSASKSSNKVVIKSEPNGANAQTSSTTQALRKVRFQHHA
NTNTNSSATNGNQDTSQTTHVSTSHCSSSSTSSSTSLAGGSANTSTIGKY
LAPLVAEVHPEQANVKPSNSYYKSPTTLSSSASLPTSVSTPFTGCQSASS
TALAAGGVTAAKAATAPAGAAATAGASPSYTAITSPVSTPTSALANSHLR
SQPIDWTIEEVIQYIESNDNSLAVHGDLFRKHEIDGKALLLLNSEMMMKY
MGLKLGPALKICNLVNKVNGRRNNLAL*

RE16782.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 04:33:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18405-PA 857 GF18405-PA 31..857 45..877 3799 89 Plus
Dana\GF18716-PA 1716 GF18716-PA 989..1268 120..385 352 32.6 Plus
Dana\GF18716-PA 1716 GF18716-PA 1163..1369 175..383 328 34.1 Plus
Dana\GF15646-PA 1273 GF15646-PA 823..1002 203..382 280 34.1 Plus
Dana\GF15646-PA 1273 GF15646-PA 557..780 169..382 216 27.2 Plus
Dana\GF15646-PA 1273 GF15646-PA 683..904 176..387 194 29.1 Plus
Dana\GF15646-PA 1273 GF15646-PA 896..1002 164..273 168 34.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 04:33:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17349-PA 870 GG17349-PA 1..870 1..877 4535 97 Plus
Dere\GG12121-PA 1462 GG12121-PA 814..1026 175..385 339 37.2 Plus
Dere\GG12121-PA 1462 GG12121-PA 912..1128 165..384 334 34.7 Plus
Dere\GG10227-PA 1257 GG10227-PA 810..1005 203..401 281 33.3 Plus
Dere\GG10227-PA 1257 GG10227-PA 544..767 169..382 215 27.2 Plus
Dere\GG10227-PA 1257 GG10227-PA 670..891 176..387 197 29.5 Plus
Dere\GG12121-PA 1462 GG12121-PA 1030..1136 175..284 168 36.4 Plus
Dere\GG10227-PA 1257 GG10227-PA 883..979 164..263 162 35 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 04:33:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19312-PA 895 GH19312-PA 46..895 51..877 3167 77.7 Plus
Dgri\GH21471-PA 1650 GH21471-PA 877..1089 175..386 358 37.7 Plus
Dgri\GH21471-PA 1650 GH21471-PA 984..1193 175..387 339 35.5 Plus
Dgri\GH10345-PA 1271 GH10345-PA 837..1032 203..401 286 32.8 Plus
Dgri\GH10345-PA 1271 GH10345-PA 570..794 168..382 216 27.9 Plus
Dgri\GH10345-PA 1271 GH10345-PA 697..918 176..387 187 28.2 Plus
Dgri\GH21471-PA 1650 GH21471-PA 1084..1259 166..311 166 29.4 Plus
Dgri\GH10345-PA 1271 GH10345-PA 1130..1257 747..873 164 30 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:20:43
Subject Length Description Subject Range Query Range Score Percent Strand
Scm-PB 877 CG9495-PB 1..877 1..877 4588 100 Plus
Scm-PA 877 CG9495-PA 1..877 1..877 4588 100 Plus
l(3)mbt-PB 1477 CG5954-PB 747..1031 120..385 338 31.5 Plus
l(3)mbt-PB 1477 CG5954-PB 926..1133 175..384 315 35.2 Plus
Sfmbt-PA 868 CG16975-PA 444..639 203..401 277 33.3 Plus
Sfmbt-PD 1220 CG16975-PD 796..991 203..401 277 33.3 Plus
Sfmbt-PB 1220 CG16975-PB 796..991 203..401 277 33.3 Plus
Sfmbt-PC 1243 CG16975-PC 796..991 203..401 277 33.3 Plus
Sfmbt-PA 868 CG16975-PA 178..401 169..382 213 28.1 Plus
Sfmbt-PD 1220 CG16975-PD 530..753 169..382 213 28.1 Plus
Sfmbt-PB 1220 CG16975-PB 530..753 169..382 213 28.1 Plus
Sfmbt-PC 1243 CG16975-PC 530..753 169..382 213 28.1 Plus
Sfmbt-PA 868 CG16975-PA 304..525 176..387 188 29.5 Plus
Sfmbt-PD 1220 CG16975-PD 656..877 176..387 188 29.5 Plus
Sfmbt-PB 1220 CG16975-PB 656..877 176..387 188 29.5 Plus
Sfmbt-PC 1243 CG16975-PC 656..877 176..387 188 29.5 Plus
Sfmbt-PC 1243 CG16975-PC 1071..1228 718..873 178 33.1 Plus
Muc68D-PB 1514 CG6004-PB 926..1168 526..775 163 22.4 Plus
Muc68D-PB 1514 CG6004-PB 454..715 522..797 162 24.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 04:33:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23531-PA 884 GI23531-PA 37..884 51..877 3251 78.7 Plus
Dmoj\GI10512-PA 1589 GI10512-PA 835..1052 170..386 372 39.1 Plus
Dmoj\GI10512-PA 1589 GI10512-PA 947..1154 175..385 347 36.3 Plus
Dmoj\GI21182-PA 1284 GI21182-PA 824..1014 203..400 286 33.5 Plus
Dmoj\GI21182-PA 1284 GI21182-PA 557..781 168..382 220 27.9 Plus
Dmoj\GI10512-PA 1589 GI10512-PA 1047..1161 166..284 183 35.3 Plus
Dmoj\GI21182-PA 1284 GI21182-PA 895..1003 162..273 165 34.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 04:33:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12262-PA 1601 GL12262-PA 911..1601 181..877 2991 84.9 Plus
Dper\GL23047-PA 1809 GL23047-PA 900..1202 120..405 367 32.9 Plus
Dper\GL23047-PA 1809 GL23047-PA 1060..1248 175..383 277 31.5 Plus
Dper\GL24770-PA 1308 GL24770-PA 834..1013 203..382 273 34.6 Plus
Dper\GL24770-PA 1308 GL24770-PA 567..791 168..382 220 27.5 Plus
Dper\GL24770-PA 1308 GL24770-PA 907..1013 164..273 161 36.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 04:33:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26241-PA 859 GA26241-PA 36..859 51..877 3626 85.7 Plus
Dpse\GA19256-PA 1881 GA19256-PA 957..1220 120..384 369 34.3 Plus
Dpse\GA19256-PA 1881 GA19256-PA 1117..1322 175..383 317 32.9 Plus
Dpse\GA14249-PA 1298 GA14249-PA 824..1003 203..382 273 34.6 Plus
Dpse\GA14249-PA 1298 GA14249-PA 557..781 168..382 220 27.5 Plus
Dpse\GA19256-PA 1881 GA19256-PA 1219..1323 171..276 186 40.7 Plus
Dpse\GA14249-PA 1298 GA14249-PA 897..1003 164..273 161 36.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 04:33:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26235-PA 671 GM26235-PA 1..671 209..877 3529 98.4 Plus
Dsec\GM26234-PA 200 GM26234-PA 45..195 47..197 788 95.4 Plus
Dsec\GM10114-PA 1470 GM10114-PA 816..1028 175..385 335 36.7 Plus
Dsec\GM10114-PA 1470 GM10114-PA 923..1130 175..384 325 34.7 Plus
Dsec\GM25834-PA 1257 GM25834-PA 810..1005 203..401 280 33.3 Plus
Dsec\GM25834-PA 1257 GM25834-PA 543..767 168..382 214 27.1 Plus
Dsec\GM25834-PA 1257 GM25834-PA 670..891 176..387 197 29.5 Plus
Dsec\GM10114-PA 1470 GM10114-PA 1031..1138 174..284 166 36.9 Plus
Dsec\GM25834-PA 1257 GM25834-PA 883..979 164..263 162 35 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 04:33:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20776-PA 381 GD20776-PA 1..381 497..877 1925 97.9 Plus
Dsim\GD22084-PA 1257 GD22084-PA 810..1005 203..401 281 33.3 Plus
Dsim\GD22084-PA 1257 GD22084-PA 543..767 168..382 214 27.1 Plus
Dsim\GD22084-PA 1257 GD22084-PA 670..891 176..387 195 29.5 Plus
Dsim\GD16615-PA 316 GD16615-PA 237..312 800..877 164 39.2 Plus
Dsim\GD22084-PA 1257 GD22084-PA 883..979 164..263 161 35 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 04:33:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10281-PA 866 GJ10281-PA 31..866 51..877 3326 80.1 Plus
Dvir\GJ23193-PA 1519 GJ23193-PA 805..1019 175..388 366 38.7 Plus
Dvir\GJ23193-PA 1519 GJ23193-PA 912..1121 175..387 339 34.1 Plus
Dvir\GJ10983-PA 1280 GJ10983-PA 822..1017 203..401 289 32.8 Plus
Dvir\GJ10983-PA 1280 GJ10983-PA 555..779 168..382 214 27.9 Plus
Dvir\GJ23193-PA 1519 GJ23193-PA 1012..1126 166..284 195 39.5 Plus
Dvir\GJ10983-PA 1280 GJ10983-PA 682..903 176..387 190 28.6 Plus
Dvir\GJ10983-PA 1280 GJ10983-PA 895..1001 164..273 161 33.6 Plus
Dvir\GJ10983-PA 1280 GJ10983-PA 1019..1265 586..873 158 24.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 04:33:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11990-PA 886 GK11990-PA 1..886 1..877 3355 74.7 Plus
Dwil\GK22590-PA 1487 GK22590-PA 834..1053 175..392 347 37.1 Plus
Dwil\GK22590-PA 1487 GK22590-PA 941..1155 175..388 305 32.4 Plus
Dwil\GK14805-PA 1285 GK14805-PA 856..1074 203..424 263 30 Plus
Dwil\GK14805-PA 1285 GK14805-PA 594..813 173..382 221 28.1 Plus
Dwil\GK14805-PA 1285 GK14805-PA 716..931 176..382 191 28.9 Plus
Dwil\GK22590-PA 1487 GK22590-PA 1042..1156 166..284 184 37.8 Plus
Dwil\GK14805-PA 1285 GK14805-PA 939..1035 175..273 170 36.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 04:33:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24755-PA 870 GE24755-PA 1..870 1..877 4548 97.1 Plus
Dyak\GE10570-PA 1465 GE10570-PA 820..1032 175..385 335 37.2 Plus
Dyak\GE10570-PA 1465 GE10570-PA 927..1134 175..384 333 34.9 Plus
Dyak\GE11897-PA 1259 GE11897-PA 810..1005 203..401 282 33.3 Plus
Dyak\GE11897-PA 1259 GE11897-PA 543..767 168..382 214 27.1 Plus
Dyak\GE11897-PA 1259 GE11897-PA 670..891 176..387 197 29.5 Plus
Dyak\GE10570-PA 1465 GE10570-PA 1036..1142 175..284 170 36.4 Plus
Dyak\GE11897-PA 1259 GE11897-PA 883..979 164..263 162 35 Plus

RE16782.hyp Sequence

Translation from 452 to 3085

> RE16782.hyp
MSGGRDSSTSSGSNSAAPGASTNATSSASASASSTSTSASPGSTTSPAST
QRQRGRPAKRATCTWCGEGKLPLQYVLPTQTGKKEFCSETCIAEFRKAYS
KGACTQCDNVIRDGAPNKEFCSIMCMNKHQKKNCSTRHSGGSASGKGLAE
SERKLLASGAPAPTGPFQYESFHVFDWDAYLEETGSEAAPAKCFKQAQNP
PNNDFKIGMKLEALDPRNVTSTCIATVVGVLGSRLRLRLDGSDSQNDFWR
LVDSTEIHAIGHCEKNGGMLQPPLGFRMNASSWPGYLCKILNNAMVAPEE
IFQPEPPEPEENLFKVGQKLEAVDKKNPQLICCATVDAIKDDQIHVTFDG
WRGAFDYWCNYRSRDIFPAGWCARSCHPMQPPGHKSRMDSSSSKQRCPRP
RYTVVAESEAMVPASPATAHFHPNCKGGPFINNSKLPCMVTGPTYQTLAK
LCLQEVLAASTDTQQLSKLLFALEGDVHIVTAAGKNFTVKIPSPMRMKDD
ESLAQFIETLCTTCRACANLISLVHETEECKKCANSRKRQLTQSATPPSS
PVLADKRNRQSNSATTSPSEKIIKQELAVKSPVESKSKTSTNNGKEPASQ
QNSNHSLNNNNNSASKSSNKVVIKSEPNGANAQTSSTTQALRKVRFQHHA
NTNTNSSATNGNQDTSQTTHVSTSHCSSSSTSSSTSLAGGSANTSTIGKY
LAPLVAEVHPEQANVKPSNSYYKSPTTLSSSASLPTSVSTPFTGCQSASS
TALAAGGVTAAKAATAPAGAAATAGASPSYTAITSPVSTPTSALANSHLR
SQPIDWTIEEVIQYIESNDNSLAVHGDLFRKHEIDGKALLLLNSEMMMKY
MGLKLGPALKICNLVNKVNGRRNNLAL*

RE16782.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:04:30
Subject Length Description Subject Range Query Range Score Percent Strand
Scm-PB 877 CG9495-PB 1..877 1..877 4588 100 Plus
Scm-PA 877 CG9495-PA 1..877 1..877 4588 100 Plus
l(3)mbt-PB 1477 CG5954-PB 747..1031 120..385 338 31.5 Plus
l(3)mbt-PB 1477 CG5954-PB 926..1133 175..384 315 35.2 Plus
Sfmbt-PA 868 CG16975-PA 444..639 203..401 277 33.3 Plus
Sfmbt-PD 1220 CG16975-PD 796..991 203..401 277 33.3 Plus
Sfmbt-PA 868 CG16975-PA 178..401 169..382 213 28.1 Plus
Sfmbt-PA 868 CG16975-PA 304..525 176..387 188 29.5 Plus