BDGP Sequence Production Resources |
Search the DGRC for RE17665
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 176 |
Well: | 65 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG8191-RA |
Protein status: | RE17665.pep: gold |
Preliminary Size: | 1038 |
Sequenced Size: | 1502 |
Gene | Date | Evidence |
---|---|---|
CG8191 | 2001-12-14 | Blastp of sequenced clone |
CG8191 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8191 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8191 | 2008-04-29 | Release 5.5 accounting |
CG8191 | 2008-08-15 | Release 5.9 accounting |
CG8191 | 2008-12-18 | 5.12 accounting |
1502 bp (1502 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071134
> RE17665.complete GCCGTCCGTATGGATTTGTTTATCCGAAAAGAACTGAGCCTATCCACGAG CAGCGTGCTTGAAGATGTGGCGCCGCACTGTCTCAAGCTACTCACATGGC TGCACGATTGTCAGGAGGAGATGCACTCCGAGCACCGCCATCTGCGACTG AGCCAATCCGTTGTGGAATCCCTGCTAAAGGCTCACCTGTACCTGTTCGA GTGCTATGATCGCTTCGGGCAATCGCTGGCCGAACGCTGCGATTGCCGTG GCTTCTTCGCTAGCTGCTCTGCATTGGTGGATCGACGGAAGTGTATTCGT GAGCTGTGTACCACCATCGTGAACACACGAAAGGGAGAAACTCATGCACC ACTGCTTCATCTTTCGCATCGAACGTTGGCCGAGATTCAGCCTGCGTGGA GTGAGATCGGTGATTTGGACTGGTCGGCAATACGCCAATCGGATGCGCTT TCTTCCAGCGATTTTATCAATCCCGATCTTCAGCAGATGCGACGGCTAGT CAAGCGGATTGGCCGCTTATCCAGCCTTGAGGACATGCAGACCGCAATAA AGCGCTCCATGGAGCTGATTGAGTACCAGGTGTGGCTGCAGCTTTTTAGG GAGCCAAAGGACAGCGAAATTCACAAGGATTGCTACCTAATGCGCCACAT GATCTGTGACACTTTATCGGAGGGCGGATCTACCGCTTGCACCGGCTTCC TGCACAATATCTTTCTGTTCGTATCGCAATCCGCCAATGAGATGAGATTC TGGGCCAGTATGGAGCATGTACGTCTGGCCGGCAGCCTTATTGCCTACCT AATCGACCATTGGAATCGCCACCTGCCCTACCTAGACTTGGATGAGATGC AATTGACCGCTGATGCACCAGTCACGGCTGTCTCGCAGCTGCCCGTGAAC GAGGCCACATACATAACCTACCTGATGCTGGCCACCGGATCCATATGTCG CCGGCAGTTCGCCCAGCAGCTGCGTGCCCAACTACCCCCCAATTCCTGGA CACATTTGCTGGAGCTGCTAAATAAAGTGGCATTCGTTTTCACTTAACTA CACTACGAGTTTAATCATGTTTCGGCAAAAACTCGCAGTTGCCATCGGTC AGGCGAACCACCTTCTCGCCCTTCTCGGCCAGGATCTCCTCGATGTTGCG CTTGCCGTCCAGATCTGTGAACCAGTTCAGATTGTCGGCGATCAGGTGGT GATTGGAGCAGCCCTCGCAGGTCACGATAACAACGCCGCGTTGGTATGCC AGCTTCGAAATGGTCTTCATGTTCCGGGTCTGGCACACCTTGCAGGTGTA GATCAGCTGCATCTTGGCCTCCAGTTTCGCCAGAGGAATGCTATTCGTGG CCACCGTCTTGTCCGCATCGTCCTGGGAGCAGAGCAAAATAATTATACTT AACTTTTTTGTTATACATAATTTTAAATATTGCATTCCATTTATAATATT TTAAATTACAAATGTAAATAACATTATTTAATACCAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 15622021..15623500 | 4..1483 | 7370 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 15732185..15733668 | 4..1487 | 7405 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 15740283..15741766 | 4..1487 | 7405 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15622018..15623450 | 1..1433 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8191-RA | 1..1038 | 10..1047 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8191-RA | 1..1038 | 10..1047 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8191-RA | 1..1038 | 10..1047 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8191-RA | 1..1038 | 10..1047 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8191-RA | 1..1038 | 10..1047 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8191-RA | 1..1482 | 1..1482 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8191-RA | 1..1482 | 1..1482 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8191-RA | 5..1486 | 1..1482 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8191-RA | 1..1482 | 1..1482 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8191-RA | 5..1486 | 1..1482 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15732182..15733666 | 1..1485 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15732182..15733666 | 1..1485 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15732182..15733666 | 1..1485 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15626215..15627699 | 1..1485 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15740280..15741764 | 1..1485 | 99 | Plus |
Translation from 0 to 1046
> RE17665.hyp AVRMDLFIRKELSLSTSSVLEDVAPHCLKLLTWLHDCQEEMHSEHRHLRL SQSVVESLLKAHLYLFECYDRFGQSLAERCDCRGFFASCSALVDRRKCIR ELCTTIVNTRKGETHAPLLHLSHRTLAEIQPAWSEIGDLDWSAIRQSDAL SSSDFINPDLQQMRRLVKRIGRLSSLEDMQTAIKRSMELIEYQVWLQLFR EPKDSEIHKDCYLMRHMICDTLSEGGSTACTGFLHNIFLFVSQSANEMRF WASMEHVRLAGSLIAYLIDHWNRHLPYLDLDEMQLTADAPVTAVSQLPVN EATYITYLMLATGSICRRQFAQQLRAQLPPNSWTHLLELLNKVAFVFT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8191-PA | 345 | CG8191-PA | 1..345 | 4..348 | 1813 | 100 | Plus |
Translation from 9 to 1046
> RE17665.pep MDLFIRKELSLSTSSVLEDVAPHCLKLLTWLHDCQEEMHSEHRHLRLSQS VVESLLKAHLYLFECYDRFGQSLAERCDCRGFFASCSALVDRRKCIRELC TTIVNTRKGETHAPLLHLSHRTLAEIQPAWSEIGDLDWSAIRQSDALSSS DFINPDLQQMRRLVKRIGRLSSLEDMQTAIKRSMELIEYQVWLQLFREPK DSEIHKDCYLMRHMICDTLSEGGSTACTGFLHNIFLFVSQSANEMRFWAS MEHVRLAGSLIAYLIDHWNRHLPYLDLDEMQLTADAPVTAVSQLPVNEAT YITYLMLATGSICRRQFAQQLRAQLPPNSWTHLLELLNKVAFVFT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21924-PA | 344 | GF21924-PA | 1..344 | 1..345 | 1025 | 55.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17903-PA | 345 | GG17903-PA | 1..345 | 1..345 | 1643 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24544-PA | 362 | GH24544-PA | 1..362 | 1..345 | 652 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8191-PA | 345 | CG8191-PA | 1..345 | 1..345 | 1813 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16352-PA | 360 | GI16352-PA | 1..360 | 1..345 | 712 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16488-PA | 345 | GL16488-PA | 1..345 | 1..345 | 1063 | 56 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20883-PA | 345 | GA20883-PA | 1..345 | 1..345 | 1056 | 55.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22569-PA | 186 | GM22569-PA | 1..186 | 160..345 | 961 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17231-PA | 369 | GD17231-PA | 25..369 | 1..345 | 1740 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16899-PA | 359 | GJ16899-PA | 1..359 | 1..345 | 714 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19379-PA | 347 | GK19379-PA | 1..347 | 1..345 | 801 | 47.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17211-PA | 345 | GE17211-PA | 1..345 | 1..345 | 1613 | 86.4 | Plus |