Clone RE17794 Report

Search the DGRC for RE17794

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:177
Well:94
Vector:pFlc-1
Associated Gene/Transcriptbeat-IIa-RA
Protein status:RE17794.pep: gold
Sequenced Size:3005

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14334 2002-01-01 Sim4 clustering to Release 2
CG14334 2002-06-03 Blastp of sequenced clone
CG14334 2003-01-01 Sim4 clustering to Release 3
beat-IIa 2008-04-29 Release 5.5 accounting
beat-IIa 2008-08-15 Release 5.9 accounting
beat-IIa 2008-12-18 5.12 accounting

Clone Sequence Records

RE17794.complete Sequence

3005 bp (3005 high quality bases) assembled on 2002-06-03

GenBank Submission: AY118373

> RE17794.complete
AGATGCGTGGCGAACGTTGAATTTAACGGTCGGTTTGGCAGTGAAAGTGG
AAAGTGGAAGCCATCGCCGTGCTCCACGAGCCTGGCCAGCGAATTGTTTG
GTGCGGAAAATAAAAACAAAAATCATAAAAAATAAGAAAAAAATACAAAA
ACACCCAAGGAAATATGAGAGTGAATGTTAGCCCCATAGAGGAAATACAT
TAAAGTGCAAAGCTCGCTGATATAATCAAGTTCAAACAATTCGAAGGAAA
AGTGCTTAGGTTGAAAAGTGTTCAAACATTGCGTCAGTTAAACTCGAAAA
ATAAAATCAAGTGATACCACCACGCTTGGAGTTGGAGTCTGCGAATTTGC
TGAGCACTTCCGGGGAGCTAAACAGCTGGACACAAGGGACGTTTATGAGT
GCGTGAAGTGAAGTACTTGGCAGATACCAAATGGGTGCCGTCTGAAATCA
AAGAAAAAATAAATCAAGACCAGAGGAAAATCTTCGAAATCAACGAAAAA
GGTCGGGGACGTGCAACAATTAACAGGCGGAAATGGAAATGTATAAACAA
TCAGCGAAATGTGCAAATTCGTGGAGTGCCAATCGAAAGCCAGCTTGAGT
GAAAGTGAAAAACTGCGGCGCGGGCAAATTATTAATTATCCGGCTGCTCT
TTAGCTCGATTTTCCCAGGGCGCAGTGCAGACATTTTGTTTATGAGCCAA
TTTGCCAAGCGCAAATAAAACCGAACCGCTGCCAGTTGAGCATTAATAAT
TTGCATATTCCGTCCCATCCCCATTCAACCCCCCCAAAAAGTGCCAAGAA
ACAGACAGTGCGGCGTGCGGCGTTGAAGTGTTTATTAAATTGTCTTTGCC
ACAAATGCAAGACATTTTGCCGACACGCGTCGCAATACTATATTCCCCCT
CGAAATGCTGGAGTTGCAACTTTGCGGAGATTTGTCAGCCGGCGACTTGA
GCGAAATTCCCAAAATGGGACACCAAAGGGCCACGGATACGGGACATCGC
CAGATCCGGAGCCACAGAAAATCCGACTGCCGGACTTTTCCAGCCAGATG
CCTCCTGCTGCTACTCGGCGTTCTACTTCTGAGCATGGAGCTCGTCGAAT
GCGCGCTGCGCAATGTCAATTTAATAATCGAACCACCGGCAGTGCGACGG
GGCCAGCATGTGGTGCTGCGGTGCATGTACGACCTGGACGGGGCTCCACT
GTACTCGGCTAAGTTCTACCGTGGCCAGCTGGAGTTCTACCGCTACACGC
CCGGCGAGTTTCCCAATACGAAAGTGTTTCCATTCCCCGGCATTCACGTG
GATGTAAGCAGCTCCAATGCCACCCAGGTGCTGTTGCGCAACGTGGGATT
CGGTCTCTCTGGCAACTTTTCATGCGAAGTGACCGCCGATGCCCCGCTCT
TCTCAACCGCCACCGCAGTGGACACCATGCAAGTTGTTGAACTGCCCGAG
AAGCGTCCGCAGGTTTTCACGGAACACACACGCTACGAGCCCGGCGATGT
CCTGCGGGCCAATTGCAGCACACCGCCGTCGCGTCCGCGGGCAGAACTCA
CATTTACCATCAACAACATGGTGATAACCCATGTGGACACCGAGTACATT
CGCACCATTGATAATCTGATTGCCACGCGGATCTCGCTGAAGATGCAATT
GCAGGGCATTCACTTTTCCAGCGTGAATCCGGCCATCTACAATAACGTTT
ACGGGCTGAACTCGGTTTACGGGCATGGAGGACCGGTTTATGCCCCGAAT
TCGAATCCTGGCGGATTACTTTTGCGCTGCTCGGCGCAAATCGGGGATCT
ATACCAGGAGTACAAGGAAATCGAGCTGGGCACTCCGCAAAAGGATCCGG
TACCGGCACGTGTCACGCTCTCATCCGACACGAGCTTGAAGAACTTTTTC
AGCTCGTATTTCTCGACCTCGGCATCGGCGGCATCGCGACTCCTGCCCGG
CGTCTACATGGCGCCGCTTATAATGGCCATGCTGGCTAGTTTATTCCGGC
TAATTGAGGCTGCATTTGAGCCCTGCGATGCCAGCAGCCAGGATCCACAG
TCACAGACCGGACATTCGATGGAACATTCCAAGGAGCGAAGGGAGCCCAA
GGAGCGTCCAGCTCTTGTGTCCAGCTGCAGCGTCTCCAAGGCGTCCAGAC
AGCAACTGGCCTGGCCAGGATCACGGACAGAAAGTCTGCGTCTGGCCTAG
GCGTGTGTTACGAGTTAGTTAAAGCCCTAAGTAATTCGAAATATATTGGG
GGAGTTCGCTAGACCTGGGCAATTAATAAGTATTTAGGTGATCAAAACTT
GCGATACGAAGGGCTTGAATAAAACTTAATCACGACACATTTGAACATAC
TTGAAGTCATTCTAGCGGTAATAAACCATTTTAGAAGGCCAGAAGAACTC
TCAGTGAGATACAAATTCATTAGCCATTAGTTCAACGTTTATTATTTAAA
CAGGTCTAGAGAATACCCTCATTTCGTTGATTTCAAGTATTTTCGTTTGA
TGACTGCTTTTCATGTTAACTCTTATTTTACACCAAAAACCACACTTTGA
GATGTGGCGTCTACTAGCGAGCTAAAGAGTAAAAACAAATTAAGTTTAAG
CAAACATTTATAAACTAGCCTAGTCATAGACAAGAATACTGGAGGTTGGA
CAGCAGAACAGAAGAGTTTAAAACCTATAAAGCAGGACATACACAATTCA
AATATAAATGTTTACACGAACGAGGTAAAGTGAAGGGAGAATATGCTAAG
TACATGAAATTACTGATTCTACTTTTAATGTGCAAAATAACACAAAAATA
AACAGAGCAGCATAACAAACCAAAGCCAGAAATCAAAGGTGTGTATCCGA
GGGAAGGGAAATGTGTGTAAAATATATTTAATGAAACATATTAAACTAAT
TTAATTTAAAGTAAATAAATCAAAGCCTTGTATGGGCATATTGTAAATGG
TGGTGAAATTAAATAAAATGTGTGTTAATTTTAAAAAAGAAAAAAAAAAA
AAAAA

RE17794.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:55:03
Subject Length Description Subject Range Query Range Score Percent Strand
beat-IIa-RA 2999 beat-IIa-RA 13..2997 1..2985 14925 100 Plus
beat-IIb.c 1891 beat-IIb.c 1336..1429 1782..1875 290 87.2 Plus
beat-IIb-RB 2498 beat-IIb-RB 1391..1466 1782..1857 275 90.7 Plus
beat-IIb.c 1891 beat-IIb.c 654..931 1136..1413 265 73 Plus
beat-IIb-RB 2498 beat-IIb-RB 718..995 1136..1413 265 73 Plus
beat-IIb.c 1891 beat-IIb.c 945..1036 1427..1518 205 81.5 Plus
beat-IIb-RB 2498 beat-IIb-RB 1009..1100 1427..1518 205 81.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:05:45
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 13144417..13145540 2985..1862 5500 99.3 Minus
chr3R 27901430 chr3R 13169803..13170545 1088..346 3640 99.3 Minus
chr3R 27901430 chr3R 13190158..13190512 352..1 1665 98.6 Minus
chr3R 27901430 chr3R 13145632..13145921 1862..1573 1435 99.7 Minus
chr3R 27901430 chr3R 13156890..13157110 1308..1088 1090 99.5 Minus
chr3R 27901430 chr3R 13155432..13155567 1439..1304 680 100 Minus
chr3R 27901430 chr3R 13151647..13151781 1573..1439 675 100 Minus
chr3R 27901430 chr3R 13057684..13057759 1857..1782 275 90.8 Minus
chr3R 27901430 chr3R 13064150..13064307 1293..1136 220 75.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:38:53 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:05:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17320001..17321124 2985..1862 5620 100 Minus
3R 32079331 3R 17345399..17346141 1088..346 3700 99.9 Minus
3R 32079331 3R 17365766..17366117 352..1 1760 100 Minus
3R 32079331 3R 17321216..17321505 1862..1573 1450 100 Minus
3R 32079331 3R 17332490..17332710 1308..1088 1105 100 Minus
3R 32079331 3R 17331018..17331153 1439..1304 680 100 Minus
3R 32079331 3R 17327233..17327367 1573..1439 675 100 Minus
3R 32079331 3R 17233237..17233312 1857..1782 275 90.8 Minus
3R 32079331 3R 17239703..17239860 1293..1136 220 75.9 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:27:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 17060832..17061955 2985..1862 5620 100 Minus
3R 31820162 3R 17086230..17086972 1088..346 3700 99.8 Minus
3R 31820162 3R 17106597..17106948 352..1 1760 100 Minus
3R 31820162 3R 17062047..17062336 1862..1573 1450 100 Minus
3R 31820162 3R 17073321..17073541 1308..1088 1105 100 Minus
3R 31820162 3R 17071849..17071984 1439..1304 680 100 Minus
3R 31820162 3R 17068064..17068198 1573..1439 675 100 Minus
3R 31820162 3R 16974068..16974143 1857..1782 275 90.7 Minus
3R 31820162 3R 16980534..16980691 1293..1136 220 75.9 Minus
Blast to na_te.dros performed 2019-03-15 14:05:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\Tom 7060 Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). 796..911 107..220 161 62.4 Plus
297 6995 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). 581..821 2686..2935 122 56 Plus

RE17794.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:07:03 Download gff for RE17794.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 13144415..13144481 2921..2989 95 == Minus
chr3R 13144535..13145539 1863..2867 99 <- Minus
chr3R 13145632..13145920 1574..1862 99 <- Minus
chr3R 13151647..13151780 1440..1573 100 <- Minus
chr3R 13155432..13155567 1304..1439 100 <- Minus
chr3R 13156895..13157109 1089..1303 99 <- Minus
chr3R 13169803..13170538 353..1088 99 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:25:37 Download gff for RE17794.complete
Subject Subject Range Query Range Percent Splice Strand
beat-IIa-RA 1..1296 905..2200 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:33:01 Download gff for RE17794.complete
Subject Subject Range Query Range Percent Splice Strand
beat-IIa-RA 1..1296 905..2200 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:17:59 Download gff for RE17794.complete
Subject Subject Range Query Range Percent Splice Strand
beat-IIa-RA 1..1296 905..2200 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:24:10 Download gff for RE17794.complete
Subject Subject Range Query Range Percent Splice Strand
beat-IIa-RA 1..1296 905..2200 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:49:59 Download gff for RE17794.complete
Subject Subject Range Query Range Percent Splice Strand
beat-IIa-RA 1..1296 905..2200 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:25:35 Download gff for RE17794.complete
Subject Subject Range Query Range Percent Splice Strand
beat-IIa-RA 1..2987 1..2987 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:33:00 Download gff for RE17794.complete
Subject Subject Range Query Range Percent Splice Strand
beat-IIa-RA 1..2987 1..2987 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:17:59 Download gff for RE17794.complete
Subject Subject Range Query Range Percent Splice Strand
beat-IIa-RA 3..2984 1..2982 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:24:11 Download gff for RE17794.complete
Subject Subject Range Query Range Percent Splice Strand
beat-IIa-RA 1..2987 1..2987 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:49:59 Download gff for RE17794.complete
Subject Subject Range Query Range Percent Splice Strand
beat-IIa-RA 3..2984 1..2982 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:07:03 Download gff for RE17794.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17319999..17321123 1863..2989 99 <- Minus
3R 17321216..17321504 1574..1862 100 <- Minus
3R 17327233..17327366 1440..1573 100 <- Minus
3R 17331018..17331153 1304..1439 100 <- Minus
3R 17332495..17332709 1089..1303 100 <- Minus
3R 17345399..17346134 353..1088 100 <- Minus
3R 17365766..17366117 1..352 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:07:03 Download gff for RE17794.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17319999..17321123 1863..2989 99 <- Minus
3R 17321216..17321504 1574..1862 100 <- Minus
3R 17327233..17327366 1440..1573 100 <- Minus
3R 17331018..17331153 1304..1439 100 <- Minus
3R 17332495..17332709 1089..1303 100 <- Minus
3R 17345399..17346134 353..1088 100 <- Minus
3R 17365766..17366117 1..352 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:07:03 Download gff for RE17794.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17319999..17321123 1863..2989 99 <- Minus
3R 17321216..17321504 1574..1862 100 <- Minus
3R 17327233..17327366 1440..1573 100 <- Minus
3R 17331018..17331153 1304..1439 100 <- Minus
3R 17332495..17332709 1089..1303 100 <- Minus
3R 17345399..17346134 353..1088 100 <- Minus
3R 17365766..17366117 1..352 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:17:59 Download gff for RE17794.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13145721..13146845 1863..2989 99 <- Minus
arm_3R 13146938..13147226 1574..1862 100 <- Minus
arm_3R 13152955..13153088 1440..1573 100 <- Minus
arm_3R 13156740..13156875 1304..1439 100 <- Minus
arm_3R 13158217..13158431 1089..1303 100 <- Minus
arm_3R 13171121..13171856 353..1088 100 <- Minus
arm_3R 13191488..13191839 1..352 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:57:02 Download gff for RE17794.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17060830..17061954 1863..2989 99 <- Minus
3R 17062047..17062335 1574..1862 100 <- Minus
3R 17068064..17068197 1440..1573 100 <- Minus
3R 17071849..17071984 1304..1439 100 <- Minus
3R 17073326..17073540 1089..1303 100 <- Minus
3R 17086230..17086965 353..1088 100 <- Minus
3R 17106597..17106948 1..352 100   Minus

RE17794.pep Sequence

Translation from 904 to 2199

> RE17794.pep
MLELQLCGDLSAGDLSEIPKMGHQRATDTGHRQIRSHRKSDCRTFPARCL
LLLLGVLLLSMELVECALRNVNLIIEPPAVRRGQHVVLRCMYDLDGAPLY
SAKFYRGQLEFYRYTPGEFPNTKVFPFPGIHVDVSSSNATQVLLRNVGFG
LSGNFSCEVTADAPLFSTATAVDTMQVVELPEKRPQVFTEHTRYEPGDVL
RANCSTPPSRPRAELTFTINNMVITHVDTEYIRTIDNLIATRISLKMQLQ
GIHFSSVNPAIYNNVYGLNSVYGHGGPVYAPNSNPGGLLLRCSAQIGDLY
QEYKEIELGTPQKDPVPARVTLSSDTSLKNFFSSYFSTSASAASRLLPGV
YMAPLIMAMLASLFRLIEAAFEPCDASSQDPQSQTGHSMEHSKERREPKE
RPALVSSCSVSKASRQQLAWPGSRTESLRLA*

RE17794.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 08:19:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16886-PA 428 GF16886-PA 1..381 1..381 1561 78.7 Plus
Dana\GF16887-PA 410 GF16887-PA 94..390 50..348 895 61.4 Plus
Dana\GF14936-PA 424 GF14936-PA 8..246 49..315 454 39.2 Plus
Dana\GF14966-PA 317 GF14966-PA 9..194 48..236 416 46.8 Plus
Dana\GF14934-PA 454 GF14934-PA 43..273 49..305 391 34.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:19:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16781-PA 429 GG16781-PA 1..429 1..431 2126 95.4 Plus
Dere\GG16782-PA 418 GG16782-PA 108..414 65..363 947 63.3 Plus
Dere\GG25189-PA 431 GG25189-PA 26..238 67..305 428 40.2 Plus
Dere\GG24184-PA 330 GG24184-PA 9..194 48..236 418 45.8 Plus
Dere\GG25187-PA 550 GG25187-PA 59..272 67..305 383 36.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 08:19:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17500-PA 448 GH17500-PA 31..362 30..363 1424 79.2 Plus
Dgri\GH17501-PA 363 GH17501-PA 41..357 60..367 1009 62 Plus
Dgri\GH11350-PA 665 GH11350-PA 7..223 64..305 407 40.3 Plus
Dgri\GH10395-PA 348 GH10395-PA 1..202 87..315 403 39.3 Plus
Dgri\GH10393-PA 462 GH10393-PA 38..264 49..301 391 35.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:43:32
Subject Length Description Subject Range Query Range Score Percent Strand
beat-IIa-PB 431 CG14334-PB 1..431 1..431 2234 100 Plus
beat-IIa-PA 431 CG14334-PA 1..431 1..431 2234 100 Plus
beat-IIb-PC 404 CG4135-PC 84..381 56..344 964 64.2 Plus
beat-IIb-PA 407 CG4135-PA 84..384 56..344 950 63.6 Plus
beat-Ia-PA 427 CG4846-PA 3..238 45..305 420 38.9 Plus
beat-Ia-PB 437 CG4846-PB 3..238 45..305 420 38.9 Plus
beat-Ib-PB 327 CG7644-PB 9..194 48..236 399 45.3 Plus
beat-Ib-PA 327 CG7644-PA 9..194 48..236 399 45.3 Plus
beat-Ic-PC 534 CG4838-PC 39..269 49..305 376 35.3 Plus
beat-Ic-PB 534 CG4838-PB 39..269 49..305 376 35.3 Plus
beat-Ic-PA 534 CG4838-PA 39..269 49..305 376 35.3 Plus
beat-IIIb-PD 404 CG33179-PD 5..296 40..344 362 32.2 Plus
beat-IIIb-PC 217 CG33179-PC 5..213 40..254 352 37.2 Plus
beat-IIIa-PE 343 CG12621-PE 80..335 77..365 349 30.8 Plus
beat-IIIa-PD 343 CG12621-PD 80..335 77..365 349 30.8 Plus
beat-IIIc-PB 361 CG15138-PB 33..293 77..360 343 31.2 Plus
beat-IIIc-PA 383 CG15138-PA 33..311 77..361 332 29.3 Plus
beat-VI-PB 332 CG14064-PB 34..215 50..232 306 38.3 Plus
beat-VI-PA 332 CG14064-PA 34..215 50..232 306 38.3 Plus
beat-Vc-PB 297 CG14390-PB 3..224 50..256 229 32.4 Plus
beat-IV-PA 413 CG10152-PA 207..370 95..254 226 31.3 Plus
beat-IV-PB 446 CG10152-PB 207..370 95..254 226 31.3 Plus
beat-Vb-PB 328 CG31298-PB 7..187 51..228 216 32.2 Plus
beat-Vb-PA 328 CG31298-PA 7..187 51..228 216 32.2 Plus
beat-VII-PD 517 CG42242-PD 27..188 71..234 205 32.3 Plus
beat-Va-PC 300 CG10134-PC 6..178 51..220 186 31 Plus
beat-Va-PA 300 CG10134-PA 6..178 51..220 186 31 Plus
beat-Va-PB 300 CG10134-PB 6..178 51..220 186 31 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:19:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22828-PA 437 GI22828-PA 1..384 1..376 1421 71.4 Plus
Dmoj\GI22830-PA 450 GI22830-PA 141..436 62..360 997 65.2 Plus
Dmoj\GI17373-PA 402 GI17373-PA 10..243 50..315 464 40.4 Plus
Dmoj\GI12934-PA 279 GI12934-PA 4..236 49..305 416 40.2 Plus
Dmoj\GI17146-PA 274 GI17146-PA 7..235 77..327 362 31.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:19:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23945-PA 439 GL23945-PA 1..436 1..425 1521 72.7 Plus
Dper\GL23946-PA 407 GL23946-PA 78..401 65..355 963 61.1 Plus
Dper\GL21040-PA 402 GL21040-PA 1..229 59..315 466 39.3 Plus
Dper\GL15323-PA 351 GL15323-PA 9..241 48..305 412 38.6 Plus
Dper\GL15307-PA 1184 GL15307-PA 24..258 20..253 412 38.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 08:19:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27119-PA 437 GA27119-PA 1..434 1..425 1530 73.2 Plus
Dpse\GA17980-PA 390 GA17980-PA 77..367 65..344 990 66.7 Plus
Dpse\GA18474-PA 402 GA18474-PA 1..229 59..315 467 39.3 Plus
Dpse\GA29045-PA 580 GA29045-PA 49..279 49..305 404 35.8 Plus
Dpse\GA20502-PA 624 GA20502-PA 289..514 55..305 404 38.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 08:19:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15371-PA 431 GM15371-PA 1..431 1..431 2272 98.6 Plus
Dsec\GM15375-PA 402 GM15375-PA 89..399 65..364 954 63 Plus
Dsec\GM18652-PA 429 GM18652-PA 26..238 67..305 432 40.2 Plus
Dsec\GM17922-PA 327 GM17922-PA 9..194 48..236 413 45.3 Plus
Dsec\GM18650-PA 590 GM18650-PA 42..215 49..223 379 42.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:19:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20239-PA 431 GD20239-PA 1..431 1..431 2262 98.1 Plus
Dsim\GD20241-PA 400 GD20241-PA 88..397 65..364 957 62.9 Plus
Dsim\GD24038-PA 429 GD24038-PA 3..238 45..305 445 38.9 Plus
Dsim\GD21931-PA 327 GD21931-PA 9..194 48..236 418 45.8 Plus
Dsim\GD24036-PA 540 GD24036-PA 42..272 49..305 398 35.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 08:19:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22829-PA 394 GJ22829-PA 24..318 62..363 1370 84.8 Plus
Dvir\GJ22830-PA 430 GJ22830-PA 125..429 62..370 1026 65.2 Plus
Dvir\GJ18052-PA 381 GJ18052-PA 1..230 58..315 449 39.1 Plus
Dvir\GJ18050-PA 568 GJ18050-PA 63..272 67..301 369 36.1 Plus
Dvir\GJ16186-PA 370 GJ16186-PA 78..331 50..327 362 31 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:19:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11457-PA 414 GK11457-PA 21..408 33..421 1394 71.6 Plus
Dwil\GK11458-PA 403 GK11458-PA 106..400 62..360 989 64.1 Plus
Dwil\GK18108-PA 411 GK18108-PA 3..248 45..315 459 38 Plus
Dwil\GK24261-PA 405 GK24261-PA 129..351 67..312 415 39.1 Plus
Dwil\GK24768-PA 518 GK24768-PA 16..246 49..307 387 35.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:19:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24173-PA 433 GE24173-PA 1..431 1..431 2062 92.1 Plus
Dyak\GE24174-PA 404 GE24174-PA 102..401 65..364 947 63.3 Plus
Dyak\GE21310-PA 427 GE21310-PA 26..268 67..335 435 37.6 Plus
Dyak\GE19377-PA 330 GE19377-PA 9..227 48..246 418 40.9 Plus
Dyak\GE21288-PA 546 GE21288-PA 42..272 49..305 398 35.7 Plus

RE17794.hyp Sequence

Translation from 904 to 2199

> RE17794.hyp
MLELQLCGDLSAGDLSEIPKMGHQRATDTGHRQIRSHRKSDCRTFPARCL
LLLLGVLLLSMELVECALRNVNLIIEPPAVRRGQHVVLRCMYDLDGAPLY
SAKFYRGQLEFYRYTPGEFPNTKVFPFPGIHVDVSSSNATQVLLRNVGFG
LSGNFSCEVTADAPLFSTATAVDTMQVVELPEKRPQVFTEHTRYEPGDVL
RANCSTPPSRPRAELTFTINNMVITHVDTEYIRTIDNLIATRISLKMQLQ
GIHFSSVNPAIYNNVYGLNSVYGHGGPVYAPNSNPGGLLLRCSAQIGDLY
QEYKEIELGTPQKDPVPARVTLSSDTSLKNFFSSYFSTSASAASRLLPGV
YMAPLIMAMLASLFRLIEAAFEPCDASSQDPQSQTGHSMEHSKERREPKE
RPALVSSCSVSKASRQQLAWPGSRTESLRLA*

RE17794.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:10:26
Subject Length Description Subject Range Query Range Score Percent Strand
beat-IIa-PB 431 CG14334-PB 1..431 1..431 2234 100 Plus
beat-IIa-PA 431 CG14334-PA 1..431 1..431 2234 100 Plus
beat-IIb-PC 404 CG4135-PC 84..381 56..344 964 64.2 Plus
beat-IIb-PA 407 CG4135-PA 84..384 56..344 950 63.6 Plus
beat-Ia-PA 427 CG4846-PA 3..238 45..305 420 38.9 Plus