Clone RE17954 Report

Search the DGRC for RE17954

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:179
Well:54
Vector:pFlc-1
Associated Gene/Transcriptpho-RA
Protein status:RE17954.pep: gold
Preliminary Size:2403
Sequenced Size:2414

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17743 2001-12-14 Blastp of sequenced clone
CG17743 2002-01-01 Sim4 clustering to Release 2
CG17743 2003-01-01 Sim4 clustering to Release 3
pho 2008-04-29 Release 5.5 accounting
pho 2008-08-15 Release 5.9 accounting
pho 2008-12-18 5.12 accounting

Clone Sequence Records

RE17954.complete Sequence

2414 bp (2414 high quality bases) assembled on 2001-12-14

GenBank Submission: AY071143

> RE17954.complete
ATGGAATACCCATGCCAAACAAGCAGAATAACCTTTTCAATATTTTGAGT
CATTTGGTATCGCGTTTTATAAAAATTACTTGAATTCTTTTGTTTTCCTC
GGCTTTTAGTGAAACAATTCGACTATCATTAAATTTATGTGGCGTTTAAT
TAATCTTTCGTATTATTTCAATCAGAATTTTTTTAACATATTCACTACAT
TTTCTTAGAGAACCGTTTGTCATATTTAATGTATATTATGTTCCCTACTT
AAATATGACAATTATTAATTCTGTGTGTATACATCAAATAGCCTCAGGGA
ATGCAACGCTCAGGAAACATACAAATCTTACCTAACACATGTGCCTACAA
TTATCCTGGCATTTGAAATGCTTTAATACTAACTTTAAACTCATGCGTAT
GTGGATTATAGTATTGTAAATATGGCATACGAACGTTTTGGAATTATTCT
TCAAAGTGAACAGTACGATGAAGATATAGGCAACACAAAAGTCAATCAGA
AAATGAATGAAGGCAACCACTACGACTTACACAGAAAAAATGCGTTTGAC
CGAATTATTCATTCAGAATCAAAAAAAGGTGATAACGTAATTAATTACAA
CATTCATGAAAACGACAAAATAAAAGCGGCTGACAATATATTTTCTTCTA
AATTAAAAATGAACCCGAATATGAGCTATGAAATGAATATCAACTGTTTT
AAAAATATTGGATATGGCGAAAATCAAGAAACTTCAAAAGTTTTAACAAA
TAGTTTATCGAACAATGATATTAATACCGAAGAGTCTGGTGTTGTCGATA
AAAATTCACCTTTCCTAACCTTAGGTACAACTATACTTAATTCAAACGGC
AAGTCAAGACGGTGGGAACAAAAGCTTGTTCATATTAAAACTATGGAGGG
AGAGTTTAGTGTTACAATGTGGGCATCCGGGATATCAGACGATGAATACT
CTGGTTCAGATCAAATCGTTGGGGCTTCGGATTTATTAAAAGGAAAGGAA
GAATTTGGCATTGATGGCTTCACGTCTCAACAAAATAAAGAATACCAGAA
AATGGAGTCAAAATTTACAAATGCACAGACCCTTGAAATGCCGCATCCTA
TAAGCTCAGTTCAGATCATGGATCATTTAATAAAGGAAAGGGGAAATTTA
TCGCAAGAAAATAATATTTCCGAAAGAATTTTATCTAAGACCACCTTAAG
CTTTGAAGAGCCAATCTTGCTTCCGGATTCTTCAAGTATTGAGTTAGTTA
ACGAAACTGCCGCAATGACAATTAATAATCACAGAACTTTAAGTAATCAT
ACGGGCAACACCGGTGATCTGCATGCTTTGCCCAGCTCAGTGCCATTTCG
TATTGGCTTGCATGAGGGGCAAGTAAATGATTGCTTATCAACAATATCAC
AATCAACTCACCAAGACAATACAGACTCGACTGGATGTGGGGAAATGAAT
CTTTCCGAAGTTACAGTATCTTATACAAATGATAAAAAAATAGCTTGCCC
ACATAAGGGTTGTAATAAGCACTTCAGAGATTCATCTGCAATGCGAAAAC
ATTTGCACACTCACGGTCCTCGAGTCCATGTTTGTGCAGAATGTGGAAAA
GCTTTCGTAGAAAGCTCAAAGCTTAAAAGACATCAGTTGGTTCACACCGG
TGAAAAACCATTTCAATGTACATTCGAGGGATGCGGAAAACGATTTTCTC
TGGATTTTAACTTAAGAACACACGTAAGAATACATACTGGAGATAGACCA
TTTGTTTGTCCGTTTGATGCCTGTAATAAAAAATTTGCTCAATCCACGAA
TTTAAAATCGCACATATTAACTCACGCAAAAGCAAAGAGAAATACCAGTA
TTTCGGGGAAAAGTGGTTGTTCAAACGCTGAATCAAACAGCCAGAGTGAA
GATACCTCTGCAAACTATGTTAAGGTTGAGTTACAGGATAGTGTTACAGA
AAACCATGTACCGTTTGTGGTATATGCAGACTGAATGTGTATATCGACCA
ACATTTCCGATTCCATGTCTCGATCAAATTTGGAATGATTGCAATAATAT
TAATATTAATATTCCTTTTAAACCCCTTTTAACAAATCCCAAAATTTTAT
AAAAATTATAATTGATTTTTTGAATTTTCACGTAAAAAAAGAGTCAGTTA
TTAGCTTTCATCTCGACCAAATTGATTGAGAACGAAAACCAGATTATTGT
GGTTTTATTTATTACTAAAAATCAGATTTAATGTAGTACATAAAAACTAA
TATAATTTTGCCGTAACTGTTCTTTAAAATCAATAATTATATGCCGATTT
CTTTCCTGTACGCTGTTTGCCATGCAGGTTTAATTACATTTTTAATTCTA
TTTTTAGAAGTAAGCTCATGCAACAGTGAATAAAAGTACGTTAACAGCAA
AAAAAAAAAAAAAA

RE17954.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:45:57
Subject Length Description Subject Range Query Range Score Percent Strand
pho-RA 2597 pho-RA 24..2419 4..2399 11965 99.9 Plus
pho-RB 2190 pho-RB 70..2190 279..2399 10590 99.9 Plus
pho.a 2354 pho.a 70..2190 279..2399 10590 99.9 Plus
pho-RB 2190 pho-RB 17..69 4..56 265 100 Plus
pho.a 2354 pho.a 17..69 4..56 265 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:35:54
Subject Length Description Subject Range Query Range Score Percent Strand
chr4 1351717 chr4 1194634..1195403 1424..655 3850 100 Minus
chr4 1351717 chr4 1192944..1193505 2398..1837 2795 99.8 Minus
chr4 1351717 chr4 1194281..1194574 1716..1423 1470 100 Minus
chr4 1351717 chr4 1201837..1202116 282..4 1335 99.3 Minus
chr4 1351717 chr4 1201520..1201754 513..279 1175 100 Minus
chr4 1351717 chr4 1195457..1195600 654..511 720 100 Minus
chr4 1351717 chr4 1193558..1193680 1837..1715 615 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:39:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:35:51
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 1174159..1174928 1424..655 3850 100 Minus
4 1348131 4 1172468..1173030 2399..1837 2800 99.8 Minus
4 1348131 4 1173806..1174099 1716..1423 1470 100 Minus
4 1348131 4 1181364..1181642 282..4 1380 99.6 Minus
4 1348131 4 1181047..1181281 513..279 1175 100 Minus
4 1348131 4 1174982..1175125 654..511 720 100 Minus
4 1348131 4 1173083..1173205 1837..1715 615 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:12:27
Subject Length Description Subject Range Query Range Score Percent Strand
4 1331231 4 1174159..1174928 1424..655 3850 100 Minus
4 1331231 4 1172468..1173030 2399..1837 2800 99.8 Minus
4 1331231 4 1173806..1174099 1716..1423 1470 100 Minus
4 1331231 4 1181364..1181642 282..4 1380 99.6 Minus
4 1331231 4 1181047..1181281 513..279 1175 100 Minus
4 1331231 4 1174982..1175125 654..511 720 100 Minus
4 1331231 4 1173083..1173205 1837..1715 615 100 Minus
Blast to na_te.dros performed 2019-03-15 19:35:52
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy5 7369 gypsy5 GYPSY5 7369bp 5935..6100 569..744 147 58.7 Plus
Dvir\Tv1 6868 Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). 5016..5092 1060..1138 129 67.9 Plus

RE17954.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:36:44 Download gff for RE17954.complete
Subject Subject Range Query Range Percent Splice Strand
chr4 1192944..1193505 1837..2398 99 <- Minus
chr4 1193559..1193678 1717..1836 100 <- Minus
chr4 1194281..1194572 1425..1716 100 <- Minus
chr4 1194634..1195403 655..1424 100 <- Minus
chr4 1195457..1195598 513..654 100 <- Minus
chr4 1201521..1201754 279..512 100 <- Minus
chr4 1201841..1202119 1..278 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:59:09 Download gff for RE17954.complete
Subject Subject Range Query Range Percent Splice Strand
pho-RB 1..1563 422..1984 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:13:11 Download gff for RE17954.complete
Subject Subject Range Query Range Percent Splice Strand
pho-RB 1..1563 422..1984 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:55:01 Download gff for RE17954.complete
Subject Subject Range Query Range Percent Splice Strand
pho-RA 1..1563 422..1984 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:37:19 Download gff for RE17954.complete
Subject Subject Range Query Range Percent Splice Strand
pho-RB 1..1563 422..1984 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:21:25 Download gff for RE17954.complete
Subject Subject Range Query Range Percent Splice Strand
pho-RA 1..1563 422..1984 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:44:20 Download gff for RE17954.complete
Subject Subject Range Query Range Percent Splice Strand
pho-RA 1..2398 1..2398 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:13:11 Download gff for RE17954.complete
Subject Subject Range Query Range Percent Splice Strand
pho-RA 1..2398 1..2398 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:55:01 Download gff for RE17954.complete
Subject Subject Range Query Range Percent Splice Strand
pho-RA 1..2381 18..2398 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:37:19 Download gff for RE17954.complete
Subject Subject Range Query Range Percent Splice Strand
pho-RA 1..2398 1..2398 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:21:25 Download gff for RE17954.complete
Subject Subject Range Query Range Percent Splice Strand
pho-RA 1..2381 18..2398 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:36:44 Download gff for RE17954.complete
Subject Subject Range Query Range Percent Splice Strand
4 1173084..1173203 1717..1836 100 <- Minus
4 1173806..1174097 1425..1716 100 <- Minus
4 1172469..1173030 1837..2398 99 <- Minus
4 1174159..1174928 655..1424 100 <- Minus
4 1174982..1175123 513..654 100 <- Minus
4 1181048..1181281 279..512 100 <- Minus
4 1181368..1181645 1..278 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:36:44 Download gff for RE17954.complete
Subject Subject Range Query Range Percent Splice Strand
4 1173084..1173203 1717..1836 100 <- Minus
4 1173806..1174097 1425..1716 100 <- Minus
4 1172469..1173030 1837..2398 99 <- Minus
4 1174159..1174928 655..1424 100 <- Minus
4 1174982..1175123 513..654 100 <- Minus
4 1181048..1181281 279..512 100 <- Minus
4 1181368..1181645 1..278 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:36:44 Download gff for RE17954.complete
Subject Subject Range Query Range Percent Splice Strand
4 1173084..1173203 1717..1836 100 <- Minus
4 1173806..1174097 1425..1716 100 <- Minus
4 1172469..1173030 1837..2398 99 <- Minus
4 1174159..1174928 655..1424 100 <- Minus
4 1174982..1175123 513..654 100 <- Minus
4 1181048..1181281 279..512 100 <- Minus
4 1181368..1181645 1..278 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:55:01 Download gff for RE17954.complete
Subject Subject Range Query Range Percent Splice Strand
arm_4 1201994..1202271 1..278 99   Minus
arm_4 1193095..1193656 1837..2398 99 <- Minus
arm_4 1193710..1193829 1717..1836 100 <- Minus
arm_4 1194432..1194723 1425..1716 100 <- Minus
arm_4 1194785..1195554 655..1424 100 <- Minus
arm_4 1195608..1195749 513..654 100 <- Minus
arm_4 1201674..1201907 279..512 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:14:58 Download gff for RE17954.complete
Subject Subject Range Query Range Percent Splice Strand
4 1181368..1181645 1..278 99   Minus
4 1172469..1173030 1837..2398 99 <- Minus
4 1173084..1173203 1717..1836 100 <- Minus
4 1173806..1174097 1425..1716 100 <- Minus
4 1174159..1174928 655..1424 100 <- Minus
4 1174982..1175123 513..654 100 <- Minus
4 1181048..1181281 279..512 100 <- Minus

RE17954.pep Sequence

Translation from 421 to 1983

> RE17954.pep
MAYERFGIILQSEQYDEDIGNTKVNQKMNEGNHYDLHRKNAFDRIIHSES
KKGDNVINYNIHENDKIKAADNIFSSKLKMNPNMSYEMNINCFKNIGYGE
NQETSKVLTNSLSNNDINTEESGVVDKNSPFLTLGTTILNSNGKSRRWEQ
KLVHIKTMEGEFSVTMWASGISDDEYSGSDQIVGASDLLKGKEEFGIDGF
TSQQNKEYQKMESKFTNAQTLEMPHPISSVQIMDHLIKERGNLSQENNIS
ERILSKTTLSFEEPILLPDSSSIELVNETAAMTINNHRTLSNHTGNTGDL
HALPSSVPFRIGLHEGQVNDCLSTISQSTHQDNTDSTGCGEMNLSEVTVS
YTNDKKIACPHKGCNKHFRDSSAMRKHLHTHGPRVHVCAECGKAFVESSK
LKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPFVCPFDA
CNKKFAQSTNLKSHILTHAKAKRNTSISGKSGCSNAESNSQSEDTSANYV
KVELQDSVTENHVPFVVYAD*

RE17954.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:20:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24664-PA 671 GF24664-PA 496..650 356..520 571 64.1 Plus
Dana\GF25133-PA 1011 GF25133-PA 404..535 351..482 249 37.9 Plus
Dana\GF14340-PA 593 GF14340-PA 386..540 353..514 238 36.2 Plus
Dana\GF23985-PA 1224 GF23985-PA 904..1005 364..468 233 46.2 Plus
Dana\GF20022-PA 182 GF20022-PA 3..116 350..468 217 39.2 Plus
Dana\GF25133-PA 1011 GF25133-PA 352..495 359..472 196 33.3 Plus
Dana\GF20022-PA 182 GF20022-PA 59..179 350..475 174 34.6 Plus
Dana\GF23985-PA 1224 GF23985-PA 901..981 388..472 168 40 Plus
Dana\GF25133-PA 1011 GF25133-PA 350..408 414..472 157 45.8 Plus
Dana\GF14340-PA 593 GF14340-PA 337..454 364..481 156 35.2 Plus
Dana\GF20022-PA 182 GF20022-PA 3..64 407..472 148 47 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:20:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16416-PA 525 GG16416-PA 1..525 1..520 2241 81.2 Plus
Dere\GG14036-PA 675 GG14036-PA 506..624 355..473 567 80.7 Plus
Dere\GG15376-PA 1002 GG15376-PA 381..504 351..474 252 39.5 Plus
Dere\GG15278-PA 1207 GG15278-PA 885..986 364..468 233 46.2 Plus
Dere\GG18735-PA 522 GG18735-PA 136..248 358..473 229 40.2 Plus
Dere\GG15376-PA 1002 GG15376-PA 329..442 359..472 185 36.8 Plus
Dere\GG15278-PA 1207 GG15278-PA 882..962 388..472 168 40 Plus
Dere\GG15376-PA 1002 GG15376-PA 327..385 414..472 155 45.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:20:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23956-PA 472 GH23956-PA 91..472 143..520 895 52 Plus
Dgri\GH16213-PA 769 GH16213-PA 590..718 345..473 566 76 Plus
Dgri\GH15946-PA 969 GH15946-PA 333..470 338..470 245 36.2 Plus
Dgri\GH24873-PA 528 GH24873-PA 160..289 358..498 237 38 Plus
Dgri\GH16462-PA 1250 GH16462-PA 926..1027 364..468 233 46.2 Plus
Dgri\GH15946-PA 969 GH15946-PA 296..442 356..472 196 32.7 Plus
Dgri\GH16462-PA 1250 GH16462-PA 923..1003 388..472 167 40 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:23:34
Subject Length Description Subject Range Query Range Score Percent Strand
pho-PB 520 CG17743-PB 1..520 1..520 2746 100 Plus
pho-PA 520 CG17743-PA 1..520 1..520 2746 100 Plus
phol-PB 669 CG3445-PB 499..618 354..473 551 80 Plus
phol-PA 669 CG3445-PA 499..618 354..473 551 80 Plus
MTF-1-PA 791 CG3743-PA 168..326 351..501 267 34 Plus
MTF-1-PF 822 CG3743-PF 383..541 351..501 267 34 Plus
MTF-1-PC 1006 CG3743-PC 383..541 351..501 267 34 Plus
CG32772-PE 520 CG32772-PE 66..261 291..498 263 30.6 Plus
CG32772-PC 520 CG32772-PC 66..261 291..498 263 30.6 Plus
Kr-PB 502 CG3340-PB 198..328 328..468 246 38 Plus
Kr-PA 502 CG3340-PA 198..328 328..468 246 38 Plus
CG15269-PA 587 CG15269-PA 410..533 360..486 243 37.7 Plus
Blimp-1-PF 1203 CG5249-PF 863..983 348..468 242 43.2 Plus
Blimp-1-PE 1203 CG5249-PE 863..983 348..468 242 43.2 Plus
Blimp-1-PD 1203 CG5249-PD 863..983 348..468 242 43.2 Plus
Blimp-1-PA 1203 CG5249-PA 863..983 348..468 242 43.2 Plus
Blimp-1-PC 1216 CG5249-PC 876..996 348..468 242 43.2 Plus
Blimp-1-PB 1216 CG5249-PB 876..996 348..468 242 43.2 Plus
erm-PB 603 CG31670-PB 315..420 364..472 238 44.5 Plus
erm-PA 611 CG31670-PA 323..428 364..472 238 44.5 Plus
erm-PC 654 CG31670-PC 323..428 364..472 238 44.5 Plus
erm-PD 698 CG31670-PD 323..428 364..472 238 44.5 Plus
CG11902-PB 1426 CG11902-PB 1291..1399 351..464 235 40.9 Plus
CG17385-PB 278 CG17385-PB 5..128 346..472 234 37.7 Plus
CG17385-PA 278 CG17385-PA 5..128 346..472 234 37.7 Plus
CG5245-PA 501 CG5245-PA 96..219 343..472 234 35.4 Plus
CG17385-PB 278 CG17385-PB 40..179 353..492 233 38.2 Plus
CG17385-PA 278 CG17385-PA 40..179 353..492 233 38.2 Plus
CG32772-PF 374 CG32772-PF 3..115 367..498 233 37.1 Plus
CG32772-PD 374 CG32772-PD 3..115 367..498 233 37.1 Plus
opa-PA 609 CG1133-PA 259..397 358..492 231 34 Plus
sens-2-PB 746 CG31632-PB 548..666 341..464 231 40.8 Plus
sens-2-PA 746 CG31632-PA 548..666 341..464 231 40.8 Plus
opa-PA 609 CG1133-PA 229..357 362..479 229 39.5 Plus
Kr-h1-PA 791 CG45074-PA 278..385 364..472 229 39.1 Plus
Kr-h1-PB 845 CG45074-PB 332..439 364..472 229 39.1 Plus
Aef1-PB 308 CG5683-PB 189..294 364..472 227 41.8 Plus
Aef1-PC 308 CG5683-PC 189..294 364..472 227 41.8 Plus
Aef1-PA 308 CG5683-PA 189..294 364..472 227 41.8 Plus
Aef1-PD 454 CG5683-PD 189..294 364..472 227 41.8 Plus
cbt-PC 347 CG4427-PC 180..270 384..474 225 47.3 Plus
cbt-PB 347 CG4427-PB 180..270 384..474 225 47.3 Plus
cbt-PA 428 CG4427-PA 261..351 384..474 225 47.3 Plus
sqz-PA 535 CG5557-PA 128..320 331..514 225 31.3 Plus
gl-PB 557 CG7672-PB 442..547 364..472 225 38.2 Plus
gl-PA 604 CG7672-PA 442..547 364..472 225 38.2 Plus
cg-PK 665 CG8367-PK 156..297 342..489 225 34.9 Plus
gl-PC 679 CG7672-PC 442..547 364..472 225 38.2 Plus
cg-PN 686 CG8367-PN 171..312 342..489 225 34.9 Plus
CG12299-PA 736 CG12299-PA 345..504 315..471 225 32.5 Plus
CG32772-PF 374 CG32772-PF 6..122 350..469 224 34.7 Plus
CG32772-PD 374 CG32772-PD 6..122 350..469 224 34.7 Plus
CG4854-PA 319 CG4854-PA 185..316 343..472 223 35.3 Plus
CG15436-PA 346 CG15436-PA 180..288 355..468 223 41.7 Plus
Cf2-PA 510 CG11924-PA 242..503 203..464 223 25.3 Plus
CG44002-PA 345 CG44002-PA 205..339 364..508 222 34.9 Plus
erm-PB 603 CG31670-PB 315..462 339..485 218 35.7 Plus
erm-PA 611 CG31670-PA 323..470 339..485 218 35.7 Plus
erm-PC 654 CG31670-PC 323..470 339..485 218 35.7 Plus
erm-PD 698 CG31670-PD 323..470 339..485 218 35.7 Plus
gl-PA 604 CG7672-PA 458..592 350..492 218 31.9 Plus
gl-PC 679 CG7672-PC 458..592 350..492 218 31.9 Plus
CG15436-PA 346 CG15436-PA 203..316 350..468 217 39.2 Plus
CG17385-PB 278 CG17385-PB 56..182 339..470 216 34.6 Plus
CG17385-PA 278 CG17385-PA 56..182 339..470 216 34.6 Plus
Cf2-PA 510 CG11924-PA 368..486 359..475 215 36.8 Plus
Kr-h1-PA 791 CG45074-PA 238..357 350..472 213 37.1 Plus
Kr-h1-PB 845 CG45074-PB 292..411 350..472 213 37.1 Plus
MTF-1-PA 791 CG3743-PA 90..259 328..472 210 30.9 Plus
CG12299-PA 736 CG12299-PA 369..495 359..489 210 37.6 Plus
Kr-PB 502 CG3340-PB 243..352 350..464 208 34.5 Plus
Kr-PA 502 CG3340-PA 243..352 350..464 208 34.5 Plus
MTF-1-PF 822 CG3743-PF 331..474 359..472 204 33.3 Plus
MTF-1-PC 1006 CG3743-PC 331..474 359..472 204 33.3 Plus
CG11902-PB 1426 CG11902-PB 1261..1375 349..468 203 38 Plus
gl-PB 557 CG7672-PB 437..535 386..488 203 37.9 Plus
gl-PA 604 CG7672-PA 437..535 386..488 203 37.9 Plus
gl-PC 679 CG7672-PC 437..535 386..488 203 37.9 Plus
gl-PA 604 CG7672-PA 443..571 298..438 202 33.6 Plus
gl-PC 679 CG7672-PC 443..571 298..438 202 33.6 Plus
CG5245-PA 501 CG5245-PA 354..470 351..472 195 35.8 Plus
CG15436-PA 346 CG15436-PA 119..236 352..472 195 32.8 Plus
CG5245-PA 501 CG5245-PA 207..331 343..473 192 30.5 Plus
erm-PB 603 CG31670-PB 358..469 349..465 188 33.9 Plus
erm-PA 611 CG31670-PA 366..477 349..465 188 33.9 Plus
erm-PC 654 CG31670-PC 366..477 349..465 188 33.9 Plus
erm-PD 698 CG31670-PD 366..477 349..465 188 33.9 Plus
CG5245-PA 501 CG5245-PA 309..438 364..468 188 34.1 Plus
sens-2-PB 746 CG31632-PB 512..628 364..481 187 33.9 Plus
sens-2-PA 746 CG31632-PA 512..628 364..481 187 33.9 Plus
CG5245-PA 501 CG5245-PA 393..491 364..465 183 35.9 Plus
CG11902-PB 1426 CG11902-PB 1266..1348 383..469 183 46 Plus
Aef1-PB 308 CG5683-PB 186..295 388..508 182 32.2 Plus
Aef1-PC 308 CG5683-PC 186..295 388..508 182 32.2 Plus
Aef1-PA 308 CG5683-PA 186..295 388..508 182 32.2 Plus
Aef1-PD 454 CG5683-PD 186..295 388..508 182 32.2 Plus
Kr-h1-PA 791 CG45074-PA 213..295 382..468 180 42.5 Plus
Kr-h1-PB 845 CG45074-PB 267..349 382..468 180 42.5 Plus
CG15269-PA 587 CG15269-PA 291..447 352..481 179 32.1 Plus
gl-PB 557 CG7672-PB 458..551 350..446 176 33.7 Plus
Blimp-1-PF 1203 CG5249-PF 873..959 382..472 173 38.5 Plus
Blimp-1-PE 1203 CG5249-PE 873..959 382..472 173 38.5 Plus
Blimp-1-PD 1203 CG5249-PD 873..959 382..472 173 38.5 Plus
Blimp-1-PA 1203 CG5249-PA 873..959 382..472 173 38.5 Plus
Blimp-1-PC 1216 CG5249-PC 886..972 382..472 173 38.5 Plus
Blimp-1-PB 1216 CG5249-PB 886..972 382..472 173 38.5 Plus
CG5245-PA 501 CG5245-PA 159..299 351..469 173 29 Plus
CG5245-PA 501 CG5245-PA 270..386 351..472 170 32.5 Plus
Aef1-PB 308 CG5683-PB 206..297 351..445 170 38.5 Plus
Aef1-PC 308 CG5683-PC 206..297 351..445 170 38.5 Plus
Aef1-PA 308 CG5683-PA 206..297 351..445 170 38.5 Plus
cbt-PC 347 CG4427-PC 166..267 398..506 170 30.3 Plus
cbt-PB 347 CG4427-PB 166..267 398..506 170 30.3 Plus
Aef1-PD 454 CG5683-PD 206..297 351..445 170 38.5 Plus
cbt-PA 428 CG4427-PA 247..348 398..506 170 30.3 Plus
gl-PB 557 CG7672-PB 443..551 298..416 169 32.3 Plus
sens-2-PB 746 CG31632-PB 593..723 360..488 166 34.3 Plus
sens-2-PA 746 CG31632-PA 593..723 360..488 166 34.3 Plus
CG12299-PA 736 CG12299-PA 250..394 353..508 162 29.3 Plus
MTF-1-PF 822 CG3743-PF 329..387 414..472 158 45.8 Plus
MTF-1-PC 1006 CG3743-PC 329..387 414..472 158 45.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:20:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14036-PA 148 GI14036-PA 1..148 374..520 653 81.8 Plus
Dmoj\GI13359-PA 706 GI13359-PA 537..656 354..473 565 80 Plus
Dmoj\GI16598-PA 994 GI16598-PA 378..501 351..474 243 38.7 Plus
Dmoj\GI14705-PA 529 GI14705-PA 146..275 358..498 237 38 Plus
Dmoj\GI17300-PA 323 GI17300-PA 127..266 343..487 229 35.6 Plus
Dmoj\GI17300-PA 323 GI17300-PA 155..273 343..466 205 36.8 Plus
Dmoj\GI16598-PA 994 GI16598-PA 323..469 356..472 194 32.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:20:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17968-PA 707 GL17968-PA 531..648 356..473 565 81.4 Plus
Dper\GL17877-PA 1045 GL17877-PA 401..538 338..470 249 36.2 Plus
Dper\GL13105-PA 510 GL13105-PA 136..248 358..473 237 41 Plus
Dper\GL12308-PA 1218 GL12308-PA 924..1025 364..468 234 46.2 Plus
Dper\GL20485-PA 318 GL20485-PA 150..264 360..475 233 43.7 Plus
Dper\GL20485-PA 318 GL20485-PA 120..238 354..477 204 36.8 Plus
Dper\GL17877-PA 1045 GL17877-PA 367..510 359..472 203 34 Plus
Dper\GL12308-PA 1218 GL12308-PA 921..1001 388..472 168 40 Plus
Dper\GL17877-PA 1045 GL17877-PA 365..423 414..472 162 47.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:20:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17456-PA 707 GA17456-PA 429..648 252..473 566 50.9 Plus
Dpse\GA17655-PA 1046 GA17655-PA 401..538 338..470 248 36.2 Plus
Dpse\GA23061-PA 507 GA23061-PA 133..245 358..473 237 41 Plus
Dpse\GA25541-PA 242 GA25541-PA 52..153 364..468 235 45.3 Plus
Dpse\GA28526-PA 464 GA28526-PA 268..369 364..468 231 44.3 Plus
Dpse\GA25541-PA 242 GA25541-PA 124..239 350..470 213 36.1 Plus
Dpse\GA17655-PA 1046 GA17655-PA 367..510 359..472 203 34 Plus
Dpse\GA25541-PA 242 GA25541-PA 90..209 344..468 200 37.3 Plus
Dpse\GA17655-PA 1046 GA17655-PA 365..423 414..472 162 47.5 Plus
Dpse\GA28526-PA 464 GA28526-PA 158..427 221..470 160 24.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:20:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13006-PA 522 GM13006-PA 1..522 1..520 2541 90.8 Plus
Dsec\GM24870-PA 669 GM24870-PA 501..618 356..473 566 81.4 Plus
Dsec\GM25148-PA 1002 GM25148-PA 382..505 351..474 247 38.7 Plus
Dsec\GM12375-PA 513 GM12375-PA 133..245 358..473 235 41 Plus
Dsec\GM14713-PA 1164 GM14713-PA 845..946 364..468 231 46.2 Plus
Dsec\GM25148-PA 1002 GM25148-PA 330..473 359..472 194 33.3 Plus
Dsec\GM14713-PA 1164 GM14713-PA 842..922 388..472 167 40 Plus
Dsec\GM25148-PA 1002 GM25148-PA 328..386 414..472 155 45.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:20:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\pho-PA 521 GD24358-PA 1..521 1..520 2549 91.2 Plus
Dsim\GD12921-PA 669 GD12921-PA 501..618 356..473 566 81.4 Plus
Dsim\GD14182-PA 1004 GD14182-PA 382..505 351..474 246 38.7 Plus
Dsim\GD16713-PA 523 GD16713-PA 134..246 358..473 235 41 Plus
Dsim\GD23994-PA 592 GD23994-PA 415..520 360..464 228 39.8 Plus
Dsim\GD14182-PA 1004 GD14182-PA 330..473 359..472 193 33.3 Plus
Dsim\GD23994-PA 592 GD23994-PA 308..452 364..481 157 33.3 Plus
Dsim\GD14182-PA 1004 GD14182-PA 328..386 414..472 155 45.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:20:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12430-PA 169 GJ12430-PA 1..169 353..520 759 82.2 Plus
Dvir\GJ13188-PA 697 GJ13188-PA 528..647 354..473 567 80 Plus
Dvir\GJ12850-PA 536 GJ12850-PA 150..285 338..468 248 36.8 Plus
Dvir\GJ14007-PA 323 GJ14007-PA 179..291 354..470 237 40.2 Plus
Dvir\GJ16768-PA 522 GJ16768-PA 144..273 358..498 236 38 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:20:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13655-PA 466 GK13655-PA 11..466 1..520 866 41.7 Plus
Dwil\GK20506-PA 709 GK20506-PA 526..643 356..473 562 80.5 Plus
Dwil\GK17576-PA 1048 GK17576-PA 398..535 338..470 247 36.2 Plus
Dwil\GK25316-PA 531 GK25316-PA 151..280 358..498 235 38 Plus
Dwil\GK17303-PA 1222 GK17303-PA 898..999 364..468 235 46.2 Plus
Dwil\GK17576-PA 1048 GK17576-PA 361..507 356..472 196 32.7 Plus
Dwil\GK17303-PA 1222 GK17303-PA 895..975 388..472 168 40 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:20:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14485-PA 516 GE14485-PA 1..516 1..520 2197 79.9 Plus
Dyak\GE21239-PA 672 GE21239-PA 503..621 355..473 566 80.7 Plus
Dyak\GE18294-PA 346 GE18294-PA 140..316 288..470 249 34.9 Plus
Dyak\GE20840-PA 1005 GE20840-PA 381..504 351..474 247 38.7 Plus
Dyak\GE16375-PA 511 GE16375-PA 131..243 358..473 234 41 Plus
Dyak\GE20840-PA 1005 GE20840-PA 329..472 359..472 193 33.3 Plus
Dyak\GE20840-PA 1005 GE20840-PA 327..385 414..472 155 45.8 Plus

RE17954.hyp Sequence

Translation from 421 to 1983

> RE17954.hyp
MAYERFGIILQSEQYDEDIGNTKVNQKMNEGNHYDLHRKNAFDRIIHSES
KKGDNVINYNIHENDKIKAADNIFSSKLKMNPNMSYEMNINCFKNIGYGE
NQETSKVLTNSLSNNDINTEESGVVDKNSPFLTLGTTILNSNGKSRRWEQ
KLVHIKTMEGEFSVTMWASGISDDEYSGSDQIVGASDLLKGKEEFGIDGF
TSQQNKEYQKMESKFTNAQTLEMPHPISSVQIMDHLIKERGNLSQENNIS
ERILSKTTLSFEEPILLPDSSSIELVNETAAMTINNHRTLSNHTGNTGDL
HALPSSVPFRIGLHEGQVNDCLSTISQSTHQDNTDSTGCGEMNLSEVTVS
YTNDKKIACPHKGCNKHFRDSSAMRKHLHTHGPRVHVCAECGKAFVESSK
LKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPFVCPFDA
CNKKFAQSTNLKSHILTHAKAKRNTSISGKSGCSNAESNSQSEDTSANYV
KVELQDSVTENHVPFVVYAD*

RE17954.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:08:46
Subject Length Description Subject Range Query Range Score Percent Strand
pho-PB 520 CG17743-PB 1..520 1..520 2746 100 Plus
pho-PA 520 CG17743-PA 1..520 1..520 2746 100 Plus
phol-PB 669 CG3445-PB 499..618 354..473 551 80 Plus
phol-PA 669 CG3445-PA 499..618 354..473 551 80 Plus
MTF-1-PA 791 CG3743-PA 168..326 351..501 267 34 Plus