Clone RE17974 Report

Search the DGRC for RE17974

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:179
Well:74
Vector:pFlc-1
Associated Gene/Transcriptpnr-RB
Protein status:RE17974.pep: gold
Sequenced Size:2799

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3978 2006-04-07 manual selection replacement
pnr 2008-04-29 In process prior to 5.5
pnr 2008-12-18 5.12 accounting

Clone Sequence Records

RE17974.complete Sequence

2799 bp assembled on 2008-12-05

GenBank Submission: BT053737.1

> RE17974.complete
AGTGGATTCCGAACGTTTATGCGCGACACGCGAAACGCAGTGAATGAAGC
GACCGGAACGCGAATTGCCGTCGCCAAAAAGCAAAAATAGTAGTGATCTA
CAAACAGCTATCATTCATCAATTGAAAACTGGAAAACTGACCGTTTTTAA
TAGCTCGCAATTTGATTAATTAAGCGGGTTTCGGTTCTCGCATCCGCTGT
TTCATTGGCCATCTTTAGCTGCCGAAATCAATAGTGTATGTGTGAGTGAT
CTGTGATCTTTGCCTTTTTTGTTCATACCCATCAAATATTTGTGGATTTC
GTGTGATTTGTGGCGCTTTTATTTGGACTCCGGCATTCAAAATCAAATCA
AAAACCGCGCACACAAAACAAAAACTCACAAAACGATTGCTGTGAAAACA
ATAAATGCGATTTAAAAGCAGTTTACATTTCTGTTTAACCGCTCGACGAA
AAGGCCATTAGGTGCCATAACTGCCAATTGGCATACGAATCTTGATTAGC
ATAAATCACACAAAGCCATTGGAGATACGCAGACGAATCAAACGGACAGA
AAAAAGCAGATACTCTCTGTCTTTACTGATTAATTCCACATCGGATCAGC
AGTCGACTCGCGACTATCCCCACTTCAGCGGCGACTATCAGAACGTGACG
CTGTCGGCTGCCTCTGCATCCACATCCGCATCCGCTTCTGCCACCCACGT
CGCCGCCGTCAAGATGTACCACAGTAGCGCCGTTGCGGCATACACGGACC
TGGCTGCCGCCGGTAGTGCCGCAAGCGCCGGAGTCGGAGTCGGGGTGTCC
GGCTATCACCAGCAGGCGGTAAACGCTCCCGTTTACGTGCCATCCAACCG
ACAGTACAACCACGTGGCCGCTCATTTTGGAAGCGCTGCGGCGCAGAATG
CCTGGACCACGGAAGGATTCGGATCGGCGCATGCACAGTTCTACTCGCCA
AACGCCGCTGTGATGATGGGCTCGTGGCGCAGTGCCTACGATCCGTCGGG
CTTCCAAAGATCCTCGCCCTACGAGAGCGCTATGGACTTCCAGTTTGGCG
AGGGACGCGAGTGCGTCAATTGCGGTGCCATATCGACTCCGTTGTGGCGA
CGGGATGGAACCGGACACTATCTGTGCAACGCCTGCGGACTGTACCATAA
GATGAACGGAATGAACCGGCCGCTGATCAAGCCTAGCAAGCGCCTGGTGA
GTGCAACTGCCACTCGGAGGATGGGCTTGTGCTGCACCAACTGCGGCACT
CGGACCACCACACTTTGGAGACGCAACAACGATGGCGAACCCGTGTGCAA
TGCCTGCGGACTGTACTACAAGTTGCACGGTGTTAACAGACCACTGGCCA
TGAGGAAGGATGGCATTCAGACCAGGAAACGAAAGCCCAAGAAAACGGGA
AGTGGTTCGGCGGTGGGAGCGGGCACTGGATCCGGAACAGGCTCCACTTT
GGAGGCCATCAAGGAGTGCAAGGAGGAGCATGATCTCAAACCCTCGCTCA
GCCTGGAGCGCCATAGCCTCAGTAAGCTGCACACGGATATGAAGAGCGGC
ACCAGCAGTAGTAGCACCTTGATGGGACATCACAGCGCGCAGCAGCAGCA
GCAGCAGCAACAGCAACAACAACAGCAACAGCAGCAGCAGCAGCAGCAAT
CGGCACACCAACAATGCTTTCCCCTTTACGGACAGACGACGACGCAACAG
CAGCACCAGCAACATGGCCACAGCATGACATCATCCTCTGGACAGGCACA
TCTGAGTGCCCGCCACCTTCACGGAGCGGCAGGAACGCAGCTCTACACGC
CCGGCAGCAGTTCCGGCGGAGGCAGTGCGTCTGCCTACACATCGCACAGT
GCGGAGACGCCGGCCCTGAGCAACGGAACTCCCTCGCCCCATTACCAGCA
CCACCACCACCTCGGCGGAACCCATGGACACCATGTGACGGCAGCGGCGG
CACATCATCATTTCCATGCCGCTGCCGCTGTGGCCGCCTACGGCGTAAAG
ACAGAGGCGAGTGCCACCAACTACGACTATGTGAACAACTGCTACTTTGG
GGGCACCTTCGGTGCGCTGGGAGGAGCTGCAACCACAACCGCCATGGCTG
GCGGAGCGGCCAGTGAACTGGCTGGCTACCATCACCAGCACAACGTCATC
CAGGCAGCCAAACTGATGGCCACCTCGTAAAGTTAAAAATCTGGACACTG
GCTCTGTGATGTGATCTCCTTCCTCCTCCTAAACTGCACCCTCACTTGAA
GCCTTCCTTGGAATCATGGCATTGAAAAGACTTTAGACATTAGTACTACT
CGGCCTTGTTTGCAATTTCGTTTAATTAAGTTTAGCTAATTGTGTGACTT
TCTGAAACGTATTTTCGGAATAGCTTAGTTCTAGCTAACTATCATGAATT
AGCTATGTTTAATTGAATTTTGGGTCGCAAATGGGGTTTTTTAGTTTAAG
AGCTGCCTGAATGGCACTTAGTTTTTATTTCTTGTAAATAACTAATAGCA
ATTCTTGTTGTACAAATCTGCGTCTATATGTATGTGCTTATCCATCAAGT
TATATGTGTATGTACAGATATTGATTATCGCTTCGTTTATAATGTAGTTC
CATTTAGGTCTTTATCATAAACATTATCTTGTTCAAGTAGCTTAAATATT
TTATGAGTATTCCGCACTTCCCCACCAACCCACTTAATAGAACATTTAGC
AGTTAGTCCTATGTAGAAGTCTAGAATTAATATCGTAGCTCTGATCCATT
TAATATGAACGCTAAATAAAGATTGTATTAAACAAAAAAAAAAAAAAAA

RE17974.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:14:23
Subject Length Description Subject Range Query Range Score Percent Strand
pnr-RB 3090 pnr-RB 230..3010 3..2783 13890 99.9 Plus
pnr.d 3270 pnr.d 1360..2937 1206..2783 7875 99.9 Plus
pnr.c 3017 pnr.c 1360..2937 1206..2783 7875 99.9 Plus
pnr.d 3270 pnr.d 166..1359 3..1196 5970 100 Plus
pnr.c 3017 pnr.c 166..1359 3..1196 5970 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:46:27
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 11864198..11865499 1482..2783 6480 99.8 Plus
chr3R 27901430 chr3R 11863171..11863791 585..1205 3060 99.5 Plus
chr3R 27901430 chr3R 11850855..11851434 5..584 2900 100 Plus
chr3R 27901430 chr3R 11863854..11864130 1206..1482 1370 99.6 Plus
chr3R 27901430 chr3R 3986979..3987112 1183..1050 370 85.1 Minus
chr3R 27901430 chr3R 11842655..11842776 1272..1393 265 81.1 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:39:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:46:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16039614..16040915 1482..2783 6510 100 Plus
3R 32079331 3R 16038587..16039207 585..1205 3105 100 Plus
3R 32079331 3R 16026257..16026838 3..584 2910 100 Plus
3R 32079331 3R 16039270..16039546 1206..1482 1370 99.6 Plus
3R 32079331 3R 8160976..8161109 1183..1050 370 85.1 Minus
3R 32079331 3R 16018047..16018168 1272..1393 265 81.1 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:32:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 15780445..15781746 1482..2783 6510 100 Plus
3R 31820162 3R 15779418..15780038 585..1205 3105 100 Plus
3R 31820162 3R 15767088..15767669 3..584 2910 100 Plus
3R 31820162 3R 15780101..15780377 1206..1482 1370 99.6 Plus
3R 31820162 3R 7901807..7901940 1183..1050 370 85 Minus
3R 31820162 3R 15758878..15758999 1272..1393 265 81.1 Plus
Blast to na_te.dros performed 2019-03-16 13:46:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6716..6903 1537..1731 334 68.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2312..2534 1589..1810 300 64 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6868 1589..1729 273 69.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6825 1615..1725 173 65.8 Plus
roo 9092 roo DM_ROO 9092bp 1049..1165 1597..1712 159 60.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2469 1625..1786 148 58.7 Plus
BS 5142 BS BS 5142bp 2012..2125 1608..1732 140 62.4 Plus

RE17974.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:47:33 Download gff for RE17974.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 11850850..11851434 1..584 99 -> Plus
chr3R 11863171..11863791 585..1205 99 -> Plus
chr3R 11863854..11864130 1206..1482 99 -> Plus
chr3R 11864199..11864304 1483..1588 100 == Plus
chr3R 11864365..11865499 1649..2783 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:34:26 Download gff for RE17974.complete
Subject Subject Range Query Range Percent Splice Strand
pnr-RA 18..1623 577..2180 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:21:05 Download gff for RE17974.complete
Subject Subject Range Query Range Percent Splice Strand
pnr-RA 18..1623 577..2180 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 15:06:51 Download gff for RE17974.complete
Subject Subject Range Query Range Percent Splice Strand
pnr-RA 18..1623 577..2180 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:19:35 Download gff for RE17974.complete
Subject Subject Range Query Range Percent Splice Strand
pnr-RA 18..1623 577..2180 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:34:25 Download gff for RE17974.complete
Subject Subject Range Query Range Percent Splice Strand
pnr-RB 158..2941 1..2783 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:21:05 Download gff for RE17974.complete
Subject Subject Range Query Range Percent Splice Strand
pnr-RB 158..2941 1..2783 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:06:51 Download gff for RE17974.complete
Subject Subject Range Query Range Percent Splice Strand
pnr-RB 3..2786 1..2783 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:19:35 Download gff for RE17974.complete
Subject Subject Range Query Range Percent Splice Strand
pnr-RB 3..2786 1..2783 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:47:33 Download gff for RE17974.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16026254..16026838 1..584 99 -> Plus
3R 16038587..16039207 585..1205 100 -> Plus
3R 16039270..16039546 1206..1482 99 -> Plus
3R 16039615..16040915 1483..2783 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:47:33 Download gff for RE17974.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16026254..16026838 1..584 99 -> Plus
3R 16038587..16039207 585..1205 100 -> Plus
3R 16039270..16039546 1206..1482 99 -> Plus
3R 16039615..16040915 1483..2783 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:47:33 Download gff for RE17974.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16026254..16026838 1..584 99 -> Plus
3R 16038587..16039207 585..1205 100 -> Plus
3R 16039270..16039546 1206..1482 99 -> Plus
3R 16039615..16040915 1483..2783 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:06:51 Download gff for RE17974.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11851976..11852560 1..584 99 -> Plus
arm_3R 11864309..11864929 585..1205 100 -> Plus
arm_3R 11864992..11865268 1206..1482 99 -> Plus
arm_3R 11865337..11866637 1483..2783 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:52:40 Download gff for RE17974.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15767085..15767669 1..584 99 -> Plus
3R 15779418..15780038 585..1205 100 -> Plus
3R 15780101..15780377 1206..1482 99 -> Plus
3R 15780446..15781746 1483..2783 100   Plus

RE17974.pep Sequence

Translation from 713 to 2179

> RE17974.pep
MYHSSAVAAYTDLAAAGSAASAGVGVGVSGYHQQAVNAPVYVPSNRQYNH
VAAHFGSAAAQNAWTTEGFGSAHAQFYSPNAAVMMGSWRSAYDPSGFQRS
SPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGM
NRPLIKPSKRLVSATATRRMGLCCTNCGTRTTTLWRRNNDGEPVCNACGL
YYKLHGVNRPLAMRKDGIQTRKRKPKKTGSGSAVGAGTGSGTGSTLEAIK
ECKEEHDLKPSLSLERHSLSKLHTDMKSGTSSSSTLMGHHSAQQQQQQQQ
QQQQQQQQQQQQSAHQQCFPLYGQTTTQQQHQQHGHSMTSSSGQAHLSAR
HLHGAAGTQLYTPGSSSGGGSASAYTSHSAETPALSNGTPSPHYQHHHHL
GGTHGHHVTAAAAHHHFHAAAAVAAYGVKTEASATNYDYVNNCYFGGTFG
ALGGAATTTAMAGGAASELAGYHHQHNVIQAAKLMATS*

RE17974.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:31:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11891-PA 551 GF11891-PA 60..551 1..488 1645 80.5 Plus
Dana\GF16170-PA 703 GF16170-PA 466..587 99..223 506 71.1 Plus
Dana\GF11880-PA 710 GF11880-PA 457..564 116..229 305 48.2 Plus
Dana\GF11857-PA 1271 GF11857-PA 806..875 158..230 272 64.4 Plus
Dana\GF15767-PA 810 GF15767-PA 643..720 153..227 242 56.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:31:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16973-PA 535 GG16973-PA 55..535 1..488 2457 95.3 Plus
Dere\GG17473-PA 487 GG17473-PA 255..371 110..223 503 75.2 Plus
Dere\GG16970-PA 749 GG16970-PA 495..601 116..229 289 47.4 Plus
Dere\GG16969-PA 1244 GG16969-PA 780..902 158..260 287 46.8 Plus
Dere\GG10108-PA 838 GG10108-PA 687..743 171..227 238 64.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:31:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18759-PA 528 GH18759-PA 67..528 28..488 1399 74.4 Plus
Dgri\GH19248-PA 696 GH19248-PA 459..580 99..223 509 71.1 Plus
Dgri\GH18758-PA 749 GH18758-PA 514..581 163..230 281 66.2 Plus
Dgri\GH18757-PA 978 GH18757-PA 496..565 158..230 274 65.8 Plus
Dgri\GH13551-PA 911 GH13551-PA 744..800 171..227 239 68.4 Plus
Dgri\GH18758-PA 749 GH18758-PA 506..562 98..154 154 49.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:28:06
Subject Length Description Subject Range Query Range Score Percent Strand
pnr-PD 488 CG3978-PD 1..488 1..488 2622 100 Plus
pnr-PA 540 CG3978-PA 53..540 1..488 2622 100 Plus
pnr-PB 488 CG3978-PB 1..488 1..488 2622 100 Plus
pnr-PC 537 CG3978-PC 53..537 1..488 2596 99.4 Plus
srp-PE 731 CG3992-PE 189..571 93..432 582 40.7 Plus
srp-PB 1249 CG3992-PB 707..1089 93..432 582 40.7 Plus
grn-PA 486 CG9656-PA 239..405 95..250 505 60.5 Plus
grn-PB 699 CG9656-PB 364..618 2..250 505 44.5 Plus
grn-PC 712 CG9656-PC 364..618 2..250 505 44.5 Plus
srp-PF 746 CG3992-PF 140..586 9..432 347 29.6 Plus
srp-PD 746 CG3992-PD 140..586 9..432 347 29.6 Plus
srp-PA 1264 CG3992-PA 658..1104 9..432 347 29.6 Plus
srp-PG 469 CG3992-PG 140..447 9..358 288 29.6 Plus
GATAe-PC 731 CG10278-PC 472..579 116..229 281 49.6 Plus
GATAe-PB 731 CG10278-PB 472..579 116..229 281 49.6 Plus
GATAe-PA 746 CG10278-PA 487..594 116..229 281 49.6 Plus
GATAd-PC 842 CG5034-PC 674..745 156..227 228 56.9 Plus
GATAd-PB 842 CG5034-PB 674..745 156..227 228 56.9 Plus
GATAd-PA 842 CG5034-PA 674..745 156..227 228 56.9 Plus
CG43689-PF 1251 CG43689-PF 538..727 288..474 189 33 Plus
CG43689-PD 1309 CG43689-PD 596..785 288..474 189 33 Plus
CG43689-PC 1332 CG43689-PC 619..808 288..474 189 33 Plus
CG43689-PH 1618 CG43689-PH 508..697 288..474 189 33 Plus
CG43689-PI 1648 CG43689-PI 538..727 288..474 189 33 Plus
CG43689-PG 1648 CG43689-PG 538..727 288..474 189 33 Plus
CG43689-PE 1706 CG43689-PE 596..785 288..474 189 33 Plus
org-1-PB 699 CG11202-PB 471..686 274..475 181 31.8 Plus
org-1-PA 699 CG11202-PA 471..686 274..475 181 31.8 Plus
grn-PB 699 CG9656-PB 215..444 242..472 180 29.2 Plus
grn-PC 712 CG9656-PC 215..444 242..472 180 29.2 Plus
CHES-1-like-PC 1267 CG12690-PC 201..459 228..467 179 27.6 Plus
CHES-1-like-PD 1268 CG12690-PD 201..459 228..467 179 27.6 Plus
CHES-1-like-PB 1268 CG12690-PB 201..459 228..467 179 27.6 Plus
CHES-1-like-PA 1268 CG12690-PA 201..459 228..467 179 27.6 Plus
abd-A-PB 590 CG10325-PB 68..290 239..467 177 30.8 Plus
Sp1-PB 520 CG1343-PB 342..490 230..353 175 38.3 Plus
Sp1-PD 715 CG1343-PD 537..685 230..353 175 38.3 Plus
Sp1-PE 720 CG1343-PE 542..690 230..353 175 38.3 Plus
Sp1-PF 726 CG1343-PF 537..685 230..353 175 38.3 Plus
rn-PC 692 CG42277-PC 381..592 194..391 174 30 Plus
rn-PF 927 CG42277-PF 616..827 194..391 174 30 Plus
rn-PE 946 CG42277-PE 635..846 194..391 174 30 Plus
rn-PG 952 CG42277-PG 635..846 194..391 174 30 Plus
CG5466-PA 594 CG5466-PA 208..441 206..415 167 25.8 Plus
CG43736-PG 1143 CG43736-PG 943..1104 264..425 165 32.8 Plus
CG43736-PF 1228 CG43736-PF 1028..1189 264..425 165 32.8 Plus
opa-PA 609 CG1133-PA 403..609 217..426 164 29.7 Plus
Smr-PG 3607 CG4013-PG 220..427 289..470 163 29.9 Plus
CG43689-PF 1251 CG43689-PF 785..894 270..392 159 35 Plus
CG43689-PD 1309 CG43689-PD 843..952 270..392 159 35 Plus
CG43689-PC 1332 CG43689-PC 866..975 270..392 159 35 Plus
CG43689-PH 1618 CG43689-PH 755..864 270..392 159 35 Plus
CG43689-PI 1648 CG43689-PI 785..894 270..392 159 35 Plus
CG43689-PG 1648 CG43689-PG 785..894 270..392 159 35 Plus
CG43689-PE 1706 CG43689-PE 843..952 270..392 159 35 Plus
brk-PA 704 CG9653-PA 17..220 224..423 159 26.2 Plus
Tlk-PG 1489 CG34412-PG 166..430 179..406 158 26.6 Plus
Eip74EF-PA 829 CG32180-PA 544..660 278..384 157 37.6 Plus
Eip74EF-PE 844 CG32180-PE 559..675 278..384 157 37.6 Plus
Eip74EF-PC 868 CG32180-PC 583..699 278..384 157 37.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:31:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22649-PA 517 GI22649-PA 67..517 28..488 1541 76.7 Plus
Dmoj\GI24284-PA 378 GI24284-PA 138..262 102..223 508 72 Plus
Dmoj\GI22648-PA 750 GI22648-PA 410..583 64..230 298 37.6 Plus
Dmoj\GI22647-PA 1005 GI22647-PA 484..553 158..230 275 65.8 Plus
Dmoj\GI18290-PA 469 GI18290-PA 405..459 171..225 234 67.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:31:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12215-PA 532 GL12215-PA 40..532 1..488 1669 82.5 Plus
Dper\GL23278-PA 705 GL23278-PA 468..589 99..223 507 71.1 Plus
Dper\GL12213-PA 760 GL12213-PA 490..597 118..229 299 49.1 Plus
Dper\GL12212-PA 1126 GL12212-PA 820..887 158..228 272 67.6 Plus
Dper\GL19159-PA 803 GL19159-PA 653..709 171..227 237 64.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:31:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17817-PB 496 GA17817-PB 1..496 1..488 1695 83.1 Plus
Dpse\GA17817-PA 532 GA17817-PA 40..532 1..488 1669 82.5 Plus
Dpse\GA26230-PB 1295 GA26230-PB 734..869 93..228 534 68.3 Plus
Dpse\GA21945-PB 488 GA21945-PB 246..372 100..223 508 70.9 Plus
Dpse\GA21945-PA 699 GA21945-PA 462..583 99..223 507 71.1 Plus
Dpse\GA21945-PB 488 GA21945-PB 251..324 162..233 164 44.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:31:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24279-PA 494 GM24279-PA 53..494 1..488 1787 86.9 Plus
Dsec\GM26366-PA 703 GM26366-PA 466..587 99..223 510 71.1 Plus
Dsec\GM24276-PA 733 GM24276-PA 478..585 116..229 302 50 Plus
Dsec\GM24275-PA 1238 GM24275-PA 778..896 158..265 273 48.8 Plus
Dsec\GM18170-PA 844 GM18170-PA 672..749 153..227 242 56.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:31:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19066-PA 736 GD19066-PA 477..584 116..229 300 49.1 Plus
Dsim\GD19064-PA 696 GD19064-PA 568..635 158..228 267 67.6 Plus
Dsim\GD20889-PA 292 GD20889-PA 118..176 165..223 255 72.9 Plus
Dsim\GD23678-PA 844 GD23678-PA 672..749 153..227 243 56.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:31:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23378-PA 520 GJ23378-PA 67..520 28..488 1430 74.8 Plus
Dvir\GJ23061-PA 686 GJ23061-PA 449..570 99..223 508 71.1 Plus
Dvir\GJ23377-PA 771 GJ23377-PA 499..613 114..229 295 48.3 Plus
Dvir\GJ23376-PA 1236 GJ23376-PA 699..768 158..230 278 67.1 Plus
Dvir\GJ18119-PA 860 GJ18119-PA 688..751 164..227 245 62.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:32:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13255-PA 550 GK13255-PA 72..550 29..488 1360 67.4 Plus
Dwil\GK12883-PA 491 GK12883-PA 252..376 102..223 507 71.2 Plus
Dwil\GK22843-PA 1047 GK22843-PA 709..773 158..225 267 67.6 Plus
Dwil\GK13254-PA 746 GK13254-PA 472..678 118..304 245 34.9 Plus
Dwil\GK18561-PA 858 GK18561-PA 699..752 174..227 236 70.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:32:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24361-PA 540 GE24361-PA 59..540 1..488 2469 95.9 Plus
Dyak\GE24873-PA 707 GE24873-PA 470..591 99..223 510 71.1 Plus
Dyak\GE24358-PA 738 GE24358-PA 483..590 116..229 298 49.1 Plus
Dyak\GE24357-PA 1272 GE24357-PA 794..913 158..260 268 45.5 Plus
Dyak\GE18923-PA 838 GE18923-PA 666..743 153..227 241 56.4 Plus

RE17974.hyp Sequence

Translation from 713 to 2179

> RE17974.hyp
MYHSSAVAAYTDLAAAGSAASAGVGVGVSGYHQQAVNAPVYVPSNRQYNH
VAAHFGSAAAQNAWTTEGFGSAHAQFYSPNAAVMMGSWRSAYDPSGFQRS
SPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGM
NRPLIKPSKRLVSATATRRMGLCCTNCGTRTTTLWRRNNDGEPVCNACGL
YYKLHGVNRPLAMRKDGIQTRKRKPKKTGSGSAVGAGTGSGTGSTLEAIK
ECKEEHDLKPSLSLERHSLSKLHTDMKSGTSSSSTLMGHHSAQQQQQQQQ
QQQQQQQQQQQQSAHQQCFPLYGQTTTQQQHQQHGHSMTSSSGQAHLSAR
HLHGAAGTQLYTPGSSSGGGSASAYTSHSAETPALSNGTPSPHYQHHHHL
GGTHGHHVTAAAAHHHFHAAAAVAAYGVKTEASATNYDYVNNCYFGGTFG
ALGGAATTTAMAGGAASELAGYHHQHNVIQAAKLMATS*

RE17974.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:32:59
Subject Length Description Subject Range Query Range Score Percent Strand
pnr-PD 488 CG3978-PD 1..488 1..488 2622 100 Plus
pnr-PA 540 CG3978-PA 53..540 1..488 2622 100 Plus
pnr-PB 488 CG3978-PB 1..488 1..488 2622 100 Plus
pnr-PC 537 CG3978-PC 53..537 1..488 2596 99.4 Plus
srp-PE 731 CG3992-PE 189..571 93..432 582 40.7 Plus