Clone RE18244 Report

Search the DGRC for RE18244

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:182
Well:44
Vector:pFlc-1
Associated Gene/Transcriptbrk-RA
Protein status:RE18244.pep: gold
Sequenced Size:3205

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9653 2006-04-19 Manual selection by Joe Carlson
brk 2008-04-29 In process prior to 5.5
brk 2008-12-18 5.12 accounting

Clone Sequence Records

RE18244.complete Sequence

3205 bp assembled on 2008-12-05

GenBank Submission: BT053738.1

> RE18244.complete
AATTGTGTTTTGGATTCCTTGCCGTGCGGATCGCAAACGCGAGTTATGAG
AAGAGCGTAGTAAAACGTACGAGAAGTAGCTAACAAGAAAAGGAAAAGAG
CAGAAGAAGCAACAGCACGCAGACATATATTTTTTTTAACTGTGTTTTAT
TTATCCGATCTATACCAATCGAAATATACACAACTATATAGATTTGAAAC
GGATTTTGAAAAGTGCTTTCAAATAAACTCCAAAAAGTATCAGAGCGAGT
GTGTGCCAGTGTGTGTATGTGAGACGCGTCGCAGTCGACGTCGCTGCTTT
GGGGACAGAGCTGCCAGATCGCGAGTTATGAAAGCGCAAGCGTCGCACGC
AAGTAGCAACAACAGCTACAACAAAAGCACCTAAAACTTACTACCTACTA
CTACTGCAAAACACACTTGTTTGACTATTATTTCGCTACATTAAAATCAA
CAAAAATACACACAAAACTGACCAGAATCTTGGGAAAATAAAAACAATCT
TTAAAGAACGCCACGAAAATAAACCATAATCATGGATAGCAGCAGCGAAC
AGTTGAACGGATCGGGAGCTTTGAATTTCAAGCGGCCCAAGGATTCTTCG
GAGAATGCCACAAACAGCCACACAAATAATGGCAATTCTTCGGGCAGCCC
CAAAATGGGAAGTCGTCGGATTTTCACGCCCCACTTTAAGCTGCAAGTCC
TCGAATCATACAGGAATGATAATGATTGCAAGGGCAATCAACGGGCCACG
GCCAGGAAATACAACATTCACCGCCGGCAAATCCAAAAATGGTTGCAATG
CGAGTCAAATTTGCGATCATCGGTGGCCAACAATCAGCAACAGCAGCAGC
AGCAGCAACAGCAACAGCAGCAACAACAGCAGCAGCAGCAACTACTCCCA
CAGCAATCGGTATCGCCGACACCGGCGGTCAAGGTGTTCCATCAGCTGAG
CCATCCGCTGGTGCACCAGTTGCATCACCATCACGCCGCCGCGGTGGGTC
ATCATCATCATCATGCCGCCCACCATCATGCCGCCCATCATCATCACGCT
GCAGCAGCAGCGGCGGCAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCCCA
CCATCATGCCGCCCACCATTTGCTGGCAGCCAATGGCATGGTTCCACACC
CCCTGGCCGCCCATCCCCACTTGCATGTCCCGGTGGCAATGCATCCTCAA
ATGCAGCATCAGAAGGAGCAACAGCAGCAGCAGCAGCAGTTGCAGCAGGA
GCAGCAGCAACAGGATCAGCAGCAGTCACAGCAGGAGACACCTGCAACCA
TTGCTACCAATGGCAGCAATCAGGGATCCTCGAATGTCCTTTCGGCGGCC
AAAATAGCCGCTGTTGTTGCCGCCGCCATGGCCACCAGCAATGGCAATCC
CACACCGACAGCAACAATCCCCGCCAGCAGCAGCAGCAGCAGCAACACAT
TGCCGAGCAGCAATAACAGTAGTTGCCACAACAGCAGCAGCAGCAGCAAT
AGCTGCAACAGCAACCAAGTGCCAATACAAGTGCCAATCCTGAGCGGATC
CCCTGGGTCCACATCGTCAGCCAGTCACATTCCACATGTGCCCTTTGCCT
ACCATCACAATCTGCATGGCTATTTGGAGAATCGACTGGAGGCGGTTGCC
ACACCAGCCCCCATGGACCTCTCTCTCGGATCCTCTGCCCGCCGTCAAAT
GCAGTTGCACGAAAAGGATCCATCTGGTGTGGATCTCACTTTCCGCAAAC
GTAAGGTCATCACTAGTCCGATGCAGCCGGATAAGATTAGTAAGCTGGAG
GAGGTGATCAAGAAGGAGCCCGAAACGGAAACGGAGAACGAGGATGTGGA
GGTGGACGTGGAGACGGAGCAGCCGGAGGAGCACAAGCTGCCCTCTAAAC
AGGTCAAGCTATTTAAGCCCTATTTGCTGGACGATGATGAGGAGCAGGAT
CATCATCATCATCACCATCACCATCGGCAGGAGGATTTGGATGAGGGAGC
TGCCGAGGAGGAGCAGGACGACGAGGAAGAGTCCCGCTATGCCGACGATG
ATGAGGTGGACTCCAAGGAGGCGGCCGACAAGAAACAGCGTCGCCTCAAG
AAAAAGCCATCGGCAATCAACGAACAAAGGGAACCCATCATCTGGAGCAA
CCATCCGTATCCCGGTGGCTGTGTATCGCCCGGCAGTTCGATCACCAGCA
GCTTTCAGTGCCCCACCAGTATGCAACAGCAGCAGACATTTCCCGTCGCC
GGCGGGAGTCCTAATCAGCAATTTCAGGACAACTGCAGCTCCAGCAAAGC
CACCACGCCCCTCAGCCCATTCTCGGCGCCCGCCCTCTCGCCCACCGGCT
TCTGTTGCCCCAAAGGATCGCCCGTTTCCGGTTACGAGAGCAGCTCATCC
ACCTACAGCGACAGCGGCAGCAACTACAGCCTCAATCTCCAGCTGCATGC
CGTCTACAACGACAATCTGATGTACATGCAACAGCAGCAGCAGCAGCAGC
AACAGCAGCATCACCTGCAACATCAGCAGCACCTGCAGCGCTGGCTGGAT
CAGGAGTCCTTGGCCACTGCGAGGACATCATCCGTCAACCGACCACTGAT
TCTCGTGGCGGATACTGCGCCCACAAACCTGACCCTGGTGGCCTAAGAAC
ACACACACACACACACACACACACACACACAACAAACAACACACACAATA
GAAACTAAGGAAGCAGCAATCCCACCAATCGGATGTTATAATGGCAGTCA
CTGGGCCTGGCCTTTTAGTTCCCTAAGCCATATTTAAGCTTAATAACGTT
TTTTTTAGCCCTACCACCTAAGTTTACCTTAATAAAAAATTGTATATCTA
AGCGCAAACATATATCTTCCAAGCATATCAGCAAAAAAAACCCCAAACCC
TAGGTATAAACCCTTCTTTTTTTTTTGGTTACACACTAAGAACAAATTAA
GCTTAAGTTCAGATTTTTCTTTTTTTTTTTCTTGTATTAGCTTGTGTAAA
TAATTGTGTACAAAAAGTGAAACAAGGCGAAACAATTGAATTTGCTTAAG
AATTTCAACGCTTCATTTCATTTGTATAACTTGTGGGAGAGTATTTTAAG
AGAGAAAATGTGAAAAATGCAACTGGAAAAACTGAGAAAATTGTTAAGAG
TAAAGCTTTAAAAACGAAACAAATACACACCTTTAAAAGAAAAAAAAAAA
AAAAA

RE18244.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:14:24
Subject Length Description Subject Range Query Range Score Percent Strand
brk-RA 3672 brk-RA 2..3186 1..3185 15925 100 Plus
X11Lbeta-RA 7524 X11Lbeta-RA 3061..3115 2477..2531 170 87.2 Plus
X11Lbeta.b 7831 X11Lbeta.b 2364..2418 2477..2531 170 87.2 Plus
X11Lbeta-RA 7524 X11Lbeta-RA 969..1005 1479..1515 140 91.8 Plus
X11Lbeta.b 7831 X11Lbeta.b 470..506 1479..1515 140 91.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:03:11
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 7199873..7203057 1..3185 15925 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:39:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:03:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7307942..7311126 1..3185 15925 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:32:06
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 7316040..7319224 1..3185 15925 100 Plus
2R 25260384 2R 8853522..8853580 2478..2536 205 89.8 Plus
X 23527363 X 10711046..10711100 2477..2531 170 87.2 Plus
X 23527363 X 10707755..10707791 1479..1515 140 91.8 Plus
Blast to na_te.dros performed 2019-03-16 02:03:09
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 1116..1274 352..505 178 63 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2480..2654 2390..2556 152 59.1 Plus
Doc3-element 4740 Doc3-element DOC3 4740bp 528..653 354..482 123 60.3 Plus

RE18244.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:03:59 Download gff for RE18244.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 7199873..7200706 1..834 100 == Plus
chrX 7200763..7201074 891..1202 84 == Plus
chrX 7201160..7201295 1288..1423 100 == Plus
chrX 7201388..7202350 1516..2478 97 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:59:23 Download gff for RE18244.complete
Subject Subject Range Query Range Percent Splice Strand
brk-RA 1..2115 532..2646 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:21:08 Download gff for RE18244.complete
Subject Subject Range Query Range Percent Splice Strand
brk-RA 1..2115 532..2646 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:43:13 Download gff for RE18244.complete
Subject Subject Range Query Range Percent Splice Strand
brk-RA 1..2115 532..2646 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:56:49 Download gff for RE18244.complete
Subject Subject Range Query Range Percent Splice Strand
brk-RA 1..2115 532..2646 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-05 09:55:23 Download gff for RE18244.complete
Subject Subject Range Query Range Percent Splice Strand
brk-RA 2..3189 1..3189 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:21:08 Download gff for RE18244.complete
Subject Subject Range Query Range Percent Splice Strand
brk-RA 2..3189 1..3189 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:43:13 Download gff for RE18244.complete
Subject Subject Range Query Range Percent Splice Strand
brk-RA 4..3191 1..3189 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:56:49 Download gff for RE18244.complete
Subject Subject Range Query Range Percent Splice Strand
brk-RA 4..3191 1..3189 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:03:59 Download gff for RE18244.complete
Subject Subject Range Query Range Percent Splice Strand
X 7307942..7311129 1..3189 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:03:59 Download gff for RE18244.complete
Subject Subject Range Query Range Percent Splice Strand
X 7307942..7311129 1..3189 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:03:59 Download gff for RE18244.complete
Subject Subject Range Query Range Percent Splice Strand
X 7307942..7311129 1..3189 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:43:13 Download gff for RE18244.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 7201975..7205162 1..3189 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:52:43 Download gff for RE18244.complete
Subject Subject Range Query Range Percent Splice Strand
X 7316040..7319227 1..3189 99   Plus

RE18244.pep Sequence

Translation from 531 to 2645

> RE18244.pep
MDSSSEQLNGSGALNFKRPKDSSENATNSHTNNGNSSGSPKMGSRRIFTP
HFKLQVLESYRNDNDCKGNQRATARKYNIHRRQIQKWLQCESNLRSSVAN
NQQQQQQQQQQQQQQQQQQQLLPQQSVSPTPAVKVFHQLSHPLVHQLHHH
HAAAVGHHHHHAAHHHAAHHHHAAAAAAAAAAAAAAAAAHHHAAHHLLAA
NGMVPHPLAAHPHLHVPVAMHPQMQHQKEQQQQQQQLQQEQQQQDQQQSQ
QETPATIATNGSNQGSSNVLSAAKIAAVVAAAMATSNGNPTPTATIPASS
SSSSNTLPSSNNSSCHNSSSSSNSCNSNQVPIQVPILSGSPGSTSSASHI
PHVPFAYHHNLHGYLENRLEAVATPAPMDLSLGSSARRQMQLHEKDPSGV
DLTFRKRKVITSPMQPDKISKLEEVIKKEPETETENEDVEVDVETEQPEE
HKLPSKQVKLFKPYLLDDDEEQDHHHHHHHHRQEDLDEGAAEEEQDDEEE
SRYADDDEVDSKEAADKKQRRLKKKPSAINEQREPIIWSNHPYPGGCVSP
GSSITSSFQCPTSMQQQQTFPVAGGSPNQQFQDNCSSSKATTPLSPFSAP
ALSPTGFCCPKGSPVSGYESSSSTYSDSGSNYSLNLQLHAVYNDNLMYMQ
QQQQQQQQQHHLQHQQHLQRWLDQESLATARTSSVNRPLILVADTAPTNL
TLVA*

RE18244.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:33:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\brk-PA 641 GF21139-PA 1..638 8..682 1139 49.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:33:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19638-PA 709 GG19638-PA 1..709 1..704 2307 89.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:33:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24261-PA 769 GH24261-PA 1..60 42..101 332 96.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:46:38
Subject Length Description Subject Range Query Range Score Percent Strand
brk-PA 704 CG9653-PA 1..704 1..704 3713 100 Plus
Smr-PF 3601 CG4013-PF 22..300 15..301 262 31.8 Plus
Smr-PE 3601 CG4013-PE 22..300 15..301 262 31.8 Plus
Smr-PD 3601 CG4013-PD 22..300 15..301 262 31.8 Plus
Smr-PG 3607 CG4013-PG 167..611 47..481 255 24.4 Plus
Smr-PG 3607 CG4013-PG 22..306 15..301 253 30.8 Plus
Smr-PF 3601 CG4013-PF 188..605 75..481 247 25.2 Plus
Smr-PE 3601 CG4013-PE 188..605 75..481 247 25.2 Plus
Smr-PD 3601 CG4013-PD 188..605 75..481 247 25.2 Plus
CG32532-PD 688 CG32532-PD 100..287 96..290 231 34.7 Plus
srp-PB 1249 CG3992-PB 174..582 21..386 228 25.4 Plus
srp-PA 1264 CG3992-PA 174..582 21..386 228 25.4 Plus
Rbp6-PB 499 CG32169-PB 242..439 92..305 224 33.3 Plus
Hr4-PC 1518 CG43934-PC 987..1192 56..252 216 33.3 Plus
Hr4-PD 1529 CG43934-PD 997..1202 56..252 216 33.3 Plus
Hr4-PF 1611 CG43934-PF 1080..1285 56..252 216 33.3 Plus
Hr4-PE 1842 CG43934-PE 1311..1516 56..252 216 33.3 Plus
Hr4-PK 1843 CG43934-PK 1311..1516 56..252 216 33.3 Plus
Hr4-PJ 1843 CG43934-PJ 1311..1516 56..252 216 33.3 Plus
Hr4-PH 1863 CG43934-PH 987..1192 56..252 216 33.3 Plus
Hr4-PG 1986 CG43934-PG 1454..1659 56..252 216 33.3 Plus
Hr4-PI 2123 CG43934-PI 987..1192 56..252 216 33.3 Plus
Abd-B-PH 493 CG11648-PH 2..247 102..348 214 28.3 Plus
Abd-B-PB 493 CG11648-PB 2..247 102..348 214 28.3 Plus
dsx-PF 427 CG11094-PF 79..351 95..332 204 27.4 Plus
dsx-PC 427 CG11094-PC 79..351 95..332 204 27.4 Plus
dsx-PB 427 CG11094-PB 79..351 95..332 204 27.4 Plus
dsx-PD 549 CG11094-PD 79..351 95..332 204 27.4 Plus
dsx-PA 549 CG11094-PA 79..351 95..332 204 27.4 Plus
dsx-PE 572 CG11094-PE 79..351 95..332 204 27.4 Plus
tty-PF 966 CG1693-PF 531..736 92..252 198 34.1 Plus
tty-PE 966 CG1693-PE 531..736 92..252 198 34.1 Plus
tty-PG 967 CG1693-PG 532..737 92..252 198 34.1 Plus
tty-PD 970 CG1693-PD 535..740 92..252 198 34.1 Plus
tty-PA 970 CG1693-PA 535..740 92..252 198 34.1 Plus
sd-PQ 625 CG8544-PQ 224..336 96..264 197 34.1 Plus
dsf-PB 691 CG9019-PB 99..386 141..393 196 30.6 Plus
dsf-PA 691 CG9019-PA 99..386 141..393 196 30.6 Plus
Tet-PD 2056 CG43444-PD 1640..2024 169..576 196 24.8 Plus
Tet-PC 2056 CG43444-PC 1640..2024 169..576 196 24.8 Plus
nocte-PD 2305 CG17255-PD 1496..1798 70..324 196 25.6 Plus
nocte-PB 2309 CG17255-PB 1496..1798 70..324 196 25.6 Plus
nocte-PA 2309 CG17255-PA 1496..1798 70..324 196 25.6 Plus
nocte-PC 2309 CG17255-PC 1496..1798 70..324 196 25.6 Plus
Tet-PA 2860 CG43444-PA 2444..2828 169..576 196 24.8 Plus
Tet-PE 2866 CG43444-PE 2450..2834 169..576 196 24.8 Plus
Tet-PB 2915 CG43444-PB 2499..2883 169..576 196 24.8 Plus
Tet-PF 2921 CG43444-PF 2505..2889 169..576 196 24.8 Plus
CG43689-PF 1251 CG43689-PF 261..770 167..689 195 21.4 Plus
CG43689-PH 1618 CG43689-PH 231..740 167..689 195 21.4 Plus
CG43689-PI 1648 CG43689-PI 261..770 167..689 195 21.4 Plus
CG43689-PG 1648 CG43689-PG 261..770 167..689 195 21.4 Plus
SoxN-PB 761 CG18024-PB 601..754 109..265 194 37.6 Plus
dsx-PF 427 CG11094-PF 59..336 80..351 193 27.6 Plus
dsx-PC 427 CG11094-PC 59..336 80..351 193 27.6 Plus
dsx-PB 427 CG11094-PB 59..336 80..351 193 27.6 Plus
dsx-PD 549 CG11094-PD 59..336 80..351 193 27.6 Plus
dsx-PA 549 CG11094-PA 59..336 80..351 193 27.6 Plus
dsx-PE 572 CG11094-PE 59..336 80..351 193 27.6 Plus
sr-PE 906 CG7847-PE 254..460 20..281 193 28.5 Plus
sr-PB 906 CG7847-PB 254..460 20..281 193 28.5 Plus
srp-PB 1249 CG3992-PB 408..636 89..320 174 30.3 Plus
srp-PA 1264 CG3992-PA 408..636 89..320 174 30.3 Plus
Tet-PA 2860 CG43444-PA 37..396 144..482 169 23.5 Plus
Tet-PE 2866 CG43444-PE 37..396 144..482 169 23.5 Plus
Tet-PB 2915 CG43444-PB 37..396 144..482 169 23.5 Plus
Tet-PF 2921 CG43444-PF 37..396 144..482 169 23.5 Plus
Hr4-PC 1518 CG43934-PC 413..708 103..335 165 24.3 Plus
Hr4-PD 1529 CG43934-PD 423..718 103..335 165 24.3 Plus
Hr4-PF 1611 CG43934-PF 506..801 103..335 165 24.3 Plus
Hr4-PE 1842 CG43934-PE 737..1032 103..335 165 24.3 Plus
Hr4-PK 1843 CG43934-PK 737..1032 103..335 165 24.3 Plus
Hr4-PJ 1843 CG43934-PJ 737..1032 103..335 165 24.3 Plus
Hr4-PH 1863 CG43934-PH 413..708 103..335 165 24.3 Plus
Hr4-PG 1986 CG43934-PG 880..1175 103..335 165 24.3 Plus
Hr4-PI 2123 CG43934-PI 413..708 103..335 165 24.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:34:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15944-PA 800 GI15944-PA 97..159 39..101 341 95.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:34:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14695-PA 753 GL14695-PA 35..143 32..140 394 86.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:34:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\brk-PA 816 GA21942-PA 40..152 32..145 399 83.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:34:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17513-PA 692 GM17513-PA 1..692 1..704 3504 96 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:34:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16839-PA 691 GD16839-PA 1..691 1..704 3518 96.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:34:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14850-PA 724 GJ14850-PA 1..60 42..101 333 96.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:34:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16142-PA 809 GK16142-PA 441..762 365..675 369 43.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:34:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15708-PA 716 GE15708-PA 1..716 1..704 2182 85.9 Plus

RE18244.hyp Sequence

Translation from 531 to 2645

> RE18244.hyp
MDSSSEQLNGSGALNFKRPKDSSENATNSHTNNGNSSGSPKMGSRRIFTP
HFKLQVLESYRNDNDCKGNQRATARKYNIHRRQIQKWLQCESNLRSSVAN
NQQQQQQQQQQQQQQQQQQQLLPQQSVSPTPAVKVFHQLSHPLVHQLHHH
HAAAVGHHHHHAAHHHAAHHHHAAAAAAAAAAAAAAAAAHHHAAHHLLAA
NGMVPHPLAAHPHLHVPVAMHPQMQHQKEQQQQQQQLQQEQQQQDQQQSQ
QETPATIATNGSNQGSSNVLSAAKIAAVVAAAMATSNGNPTPTATIPASS
SSSSNTLPSSNNSSCHNSSSSSNSCNSNQVPIQVPILSGSPGSTSSASHI
PHVPFAYHHNLHGYLENRLEAVATPAPMDLSLGSSARRQMQLHEKDPSGV
DLTFRKRKVITSPMQPDKISKLEEVIKKEPETETENEDVEVDVETEQPEE
HKLPSKQVKLFKPYLLDDDEEQDHHHHHHHHRQEDLDEGAAEEEQDDEEE
SRYADDDEVDSKEAADKKQRRLKKKPSAINEQREPIIWSNHPYPGGCVSP
GSSITSSFQCPTSMQQQQTFPVAGGSPNQQFQDNCSSSKATTPLSPFSAP
ALSPTGFCCPKGSPVSGYESSSSTYSDSGSNYSLNLQLHAVYNDNLMYMQ
QQQQQQQQQHHLQHQQHLQRWLDQESLATARTSSVNRPLILVADTAPTNL
TLVA*

RE18244.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:43:07
Subject Length Description Subject Range Query Range Score Percent Strand
brk-PA 704 CG9653-PA 1..704 1..704 3713 100 Plus
Smr-PF 3601 CG4013-PF 22..300 15..301 262 31.8 Plus
Smr-PE 3601 CG4013-PE 22..300 15..301 262 31.8 Plus
Smr-PD 3601 CG4013-PD 22..300 15..301 262 31.8 Plus
Smr-PG 3607 CG4013-PG 167..611 47..481 255 24.4 Plus
Smr-PF 3601 CG4013-PF 188..605 75..481 247 25.2 Plus
Smr-PE 3601 CG4013-PE 188..605 75..481 247 25.2 Plus
Smr-PD 3601 CG4013-PD 188..605 75..481 247 25.2 Plus