BDGP Sequence Production Resources |
Search the DGRC for RE18459
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 184 |
Well: | 59 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG10092-RA |
Protein status: | RE18459.pep: gold |
Preliminary Size: | 1716 |
Sequenced Size: | 1910 |
Gene | Date | Evidence |
---|---|---|
CG10092 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10092 | 2002-02-26 | Blastp of sequenced clone |
CG10092 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10092 | 2008-04-29 | Release 5.5 accounting |
CG10092 | 2008-08-15 | Release 5.9 accounting |
CG10092 | 2008-12-18 | 5.12 accounting |
1910 bp (1910 high quality bases) assembled on 2002-02-26
GenBank Submission: AY089591
> RE18459.complete ACCGTTGGATTTTTCGGCGGCTCATGGAACGGCCACACATTGGCTTGTTT ACCTATAAAATCTGTAATGCATTGAAAGAACTAACGGAAAGGATGATTCG CTTACGGCAAGCAATTTGTGAGCAGCTGCCGCATCTCAAGAATGCCTGCT ATGCCCTGGAGGTGCCTGTCAAGAAACAACAGCTACAGAATAGCCGACGT CCAACTGTGGAGTGGATTCTGCCCTCTGCGTTTGCGCAACAGGAGGTGGA ACTACTGGACTCATTGAAGAAGCGCAGATTCGAGGCCTATGTGGAAAACG TTCGGATTGTACCTAGCGCTGGGCGCAGTGCAGCCAAAATCGAGTTTCAG CTGCAGCCACAGGTCTTTGTAGAACAGCTCCTCCAAACTAAAGAGATTGC TTTACATCCTTCGCCCTTTGCTGCGGAACACATAGTGGTTGAGTACAGCT CGCCCAACATAGCCAAACCCTTCCACGTGGGCCACCTGCGCTCCACAATC ATCGGCAATGTTCTGGCCAACCTGCATGAGCATTTGGGCTACCGCACAAC ACGGTTGAACTATCTGGGGGATTGGGGCACGCAATTTGGACTACTGGTAT TGGGAGTTCAACTGCTGAATGTAAGCGACAAAGAGATGCAACTATCCCCA ATAGAAACGCTGTACAAATCCTACGTGGCCGCCAACAAGGCTGCTGAACA AAGACCTGAAATCGCGCAACAGGCGAGGGACCTCTTCGCCGCCTTGGAAG GAGGAACGGATAAATCAATGGCCAAGAAATGGCAGCAATACAGAAACTAC ACTATAGAGGATCTATCCAAAGTCTATAACAGATTGGGCGTTCACTTCGA TAGCTACGAATGGGAATCCCAGTACTCCCAGCAGCAAATTCAGGATGTTC TGGACAAACTGCGAAGCGCTGGACTCCTCCAGCCGGAGCACGATGGTCGT GAGATTGTCGTGGTGGACGGCCGACGCATTCCTGTGATCAAGAGTAATGG ATCCACTTTGTACCTGGCCAGGGACATAGCTGCCCTGCTGGAGAGACTCT CCAGGTTCCAGTTCTCACGCTTGCTCTACGTCGTGGACAATGGTCAAGCG GATCATTTTAATGCCCTTTTTAAAACAACGGCAGCCCTGGATGACCGCCT AAGTCTGGAACAGCTGCAACATGTGAAATTTGGACGCATTTATGGGATGA GCACTCGTCAGGGAAAGGCAATCTTTCTAAAAGATGTCCTAGATGAAGCA CGAGACATAATGCGGGAAAAGCGAAACATAAGTGCCACTACCAGAGAAAA TTACAATCTGGATGATGAACATGTATGTGATATTTTGGGCGTGTCAGCCG TCCTGGTCAATGTCCTTAAGCAGCGAAGGCAACGAGATCACGAGTTCAGC TGGCAGCAGGCACTCCAAGTAAATGGTGACACAGGAATCAAGCTTCAATA CACACACTGCCGCCTGCACAGTTTGCTGGATAATTTCCGAGATGTAGATC TGGACGACATTAAGCCCGACTGGAAGCATTTCTCTACGGAGCCTGCGGAT GCTTTGGATCTGCTCTACGCACTGGCACGTTTCGATCAAAGCGTTTGGCA ATCGAAGGAACAACTGGAGGCTTGTGTCCTTGTCAACTATCTCTTTGGAT TGTGCAATGCCACCAGTCAAGCGCTGAAAAGATTGCCTGTGAAACAAGAG TCCAGCCTAGAGAAGCAACTCCAACGCCTGCTTCTTTTTCACGCTGCCAA AAAAACACTGCGACACGGAATGGAGCTCCTTGGCCTGCGTCCACTGAACC AAATGTAGACCAATTAGACCTAAGGCACCGCAGTTAACACAATTTATATT TATTAAAACACTTCGCTATAAAATGCAGCCTAGTGTTGCAGATGCAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 3713360..3714524 | 123..1287 | 5825 | 100 | Plus |
chr3R | 27901430 | chr3R | 3714586..3714952 | 1288..1654 | 1820 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 3715117..3715358 | 1654..1895 | 1195 | 99.6 | Plus |
chr3R | 27901430 | chr3R | 3713231..3713300 | 56..125 | 350 | 100 | Plus |
chr3R | 27901430 | chr3R | 3713107..3713161 | 1..55 | 275 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 7887337..7888501 | 123..1287 | 5825 | 100 | Plus |
3R | 32079331 | 3R | 7888563..7888929 | 1288..1654 | 1835 | 100 | Plus |
3R | 32079331 | 3R | 7889095..7889337 | 1654..1896 | 1215 | 100 | Plus |
3R | 32079331 | 3R | 7887208..7887277 | 56..125 | 350 | 100 | Plus |
3R | 32079331 | 3R | 7887084..7887138 | 1..55 | 275 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 7628168..7629332 | 123..1287 | 5825 | 100 | Plus |
3R | 31820162 | 3R | 7629394..7629760 | 1288..1654 | 1835 | 100 | Plus |
3R | 31820162 | 3R | 7629926..7630168 | 1654..1896 | 1215 | 100 | Plus |
3R | 31820162 | 3R | 7628039..7628108 | 56..125 | 350 | 100 | Plus |
3R | 31820162 | 3R | 7627915..7627969 | 1..55 | 275 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 3715118..3715358 | 1655..1895 | 99 | Plus | |
chr3R | 3713107..3713161 | 1..55 | 100 | -> | Plus |
chr3R | 3713231..3713300 | 56..125 | 100 | -> | Plus |
chr3R | 3713363..3714524 | 126..1287 | 100 | -> | Plus |
chr3R | 3714586..3714952 | 1288..1654 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10092-RA | 1..1785 | 24..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10092-RA | 1..1785 | 24..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10092-RA | 1..1785 | 24..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10092-RA | 1..1785 | 24..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10092-RA | 1..1785 | 24..1808 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10092-RA | 1..1895 | 1..1895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10092-RA | 1..1895 | 1..1895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10092-RA | 40..1934 | 1..1895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10092-RA | 1..1895 | 1..1895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10092-RA | 40..1934 | 1..1895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7887340..7888501 | 126..1287 | 100 | -> | Plus |
3R | 7888563..7888929 | 1288..1654 | 100 | -> | Plus |
3R | 7889096..7889336 | 1655..1895 | 100 | Plus | |
3R | 7887084..7887138 | 1..55 | 100 | -> | Plus |
3R | 7887208..7887277 | 56..125 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7887340..7888501 | 126..1287 | 100 | -> | Plus |
3R | 7888563..7888929 | 1288..1654 | 100 | -> | Plus |
3R | 7889096..7889336 | 1655..1895 | 100 | Plus | |
3R | 7887084..7887138 | 1..55 | 100 | -> | Plus |
3R | 7887208..7887277 | 56..125 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7887340..7888501 | 126..1287 | 100 | -> | Plus |
3R | 7888563..7888929 | 1288..1654 | 100 | -> | Plus |
3R | 7889096..7889336 | 1655..1895 | 100 | Plus | |
3R | 7887084..7887138 | 1..55 | 100 | -> | Plus |
3R | 7887208..7887277 | 56..125 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 3712806..3712860 | 1..55 | 100 | -> | Plus |
arm_3R | 3712930..3712999 | 56..125 | 100 | -> | Plus |
arm_3R | 3713062..3714223 | 126..1287 | 100 | -> | Plus |
arm_3R | 3714285..3714651 | 1288..1654 | 100 | -> | Plus |
arm_3R | 3714818..3715058 | 1655..1895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7628171..7629332 | 126..1287 | 100 | -> | Plus |
3R | 7629394..7629760 | 1288..1654 | 100 | -> | Plus |
3R | 7629927..7630167 | 1655..1895 | 100 | Plus | |
3R | 7627915..7627969 | 1..55 | 100 | -> | Plus |
3R | 7628039..7628108 | 56..125 | 100 | -> | Plus |
Translation from 2 to 1807
> RE18459.hyp RWIFRRLMERPHIGLFTYKICNALKELTERMIRLRQAICEQLPHLKNACY ALEVPVKKQQLQNSRRPTVEWILPSAFAQQEVELLDSLKKRRFEAYVENV RIVPSAGRSAAKIEFQLQPQVFVEQLLQTKEIALHPSPFAAEHIVVEYSS PNIAKPFHVGHLRSTIIGNVLANLHEHLGYRTTRLNYLGDWGTQFGLLVL GVQLLNVSDKEMQLSPIETLYKSYVAANKAAEQRPEIAQQARDLFAALEG GTDKSMAKKWQQYRNYTIEDLSKVYNRLGVHFDSYEWESQYSQQQIQDVL DKLRSAGLLQPEHDGREIVVVDGRRIPVIKSNGSTLYLARDIAALLERLS RFQFSRLLYVVDNGQADHFNALFKTTAALDDRLSLEQLQHVKFGRIYGMS TRQGKAIFLKDVLDEARDIMREKRNISATTRENYNLDDEHVCDILGVSAV LVNVLKQRRQRDHEFSWQQALQVNGDTGIKLQYTHCRLHSLLDNFRDVDL DDIKPDWKHFSTEPADALDLLYALARFDQSVWQSKEQLEACVLVNYLFGL CNATSQALKRLPVKQESSLEKQLQRLLLFHAAKKTLRHGMELLGLRPLNQ M*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10092-PB | 594 | CG10092-PB | 1..594 | 8..601 | 3053 | 100 | Plus |
CG10092-PA | 594 | CG10092-PA | 1..594 | 8..601 | 3053 | 100 | Plus |
Aats-arg-PA | 665 | CG9020-PA | 190..665 | 136..601 | 462 | 29.2 | Plus |
Translation from 23 to 1807
> RE18459.pep MERPHIGLFTYKICNALKELTERMIRLRQAICEQLPHLKNACYALEVPVK KQQLQNSRRPTVEWILPSAFAQQEVELLDSLKKRRFEAYVENVRIVPSAG RSAAKIEFQLQPQVFVEQLLQTKEIALHPSPFAAEHIVVEYSSPNIAKPF HVGHLRSTIIGNVLANLHEHLGYRTTRLNYLGDWGTQFGLLVLGVQLLNV SDKEMQLSPIETLYKSYVAANKAAEQRPEIAQQARDLFAALEGGTDKSMA KKWQQYRNYTIEDLSKVYNRLGVHFDSYEWESQYSQQQIQDVLDKLRSAG LLQPEHDGREIVVVDGRRIPVIKSNGSTLYLARDIAALLERLSRFQFSRL LYVVDNGQADHFNALFKTTAALDDRLSLEQLQHVKFGRIYGMSTRQGKAI FLKDVLDEARDIMREKRNISATTRENYNLDDEHVCDILGVSAVLVNVLKQ RRQRDHEFSWQQALQVNGDTGIKLQYTHCRLHSLLDNFRDVDLDDIKPDW KHFSTEPADALDLLYALARFDQSVWQSKEQLEACVLVNYLFGLCNATSQA LKRLPVKQESSLEKQLQRLLLFHAAKKTLRHGMELLGLRPLNQM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18177-PA | 570 | GF18177-PA | 1..570 | 24..594 | 2420 | 78.7 | Plus |
Dana\GF16459-PA | 666 | GF16459-PA | 188..666 | 126..594 | 483 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14252-PA | 572 | GG14252-PA | 1..572 | 24..594 | 2724 | 90.6 | Plus |
Dere\GG19367-PA | 664 | GG19367-PA | 186..664 | 126..594 | 452 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18567-PA | 571 | GH18567-PA | 4..571 | 26..594 | 2204 | 73.7 | Plus |
Dgri\GH12545-PA | 668 | GH12545-PA | 159..668 | 93..594 | 435 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ArgRS-m-PB | 594 | CG10092-PB | 1..594 | 1..594 | 3053 | 100 | Plus |
ArgRS-m-PA | 594 | CG10092-PA | 1..594 | 1..594 | 3053 | 100 | Plus |
ArgRS-PA | 665 | CG9020-PA | 190..665 | 129..594 | 462 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24765-PA | 571 | GI24765-PA | 5..571 | 27..594 | 2200 | 71.9 | Plus |
Dmoj\GI21379-PA | 212 | GI21379-PA | 92..182 | 102..192 | 207 | 44 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12462-PA | 572 | GL12462-PA | 1..572 | 24..594 | 2493 | 81.5 | Plus |
Dper\GL14083-PA | 664 | GL14083-PA | 186..664 | 126..594 | 430 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10066-PA | 572 | GA10066-PA | 1..572 | 24..594 | 2493 | 81.5 | Plus |
Dpse\GA24005-PA | 282 | GA24005-PA | 186..252 | 126..192 | 197 | 52.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21064-PA | 499 | GM21064-PA | 116..499 | 211..594 | 1915 | 95.6 | Plus |
Dsec\GM21064-PA | 499 | GM21064-PA | 1..107 | 24..129 | 495 | 90.7 | Plus |
Dsec\GM22521-PA | 665 | GM22521-PA | 187..665 | 126..594 | 462 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19955-PA | 572 | GD19955-PA | 1..572 | 24..594 | 2889 | 94.4 | Plus |
Dsim\GD24677-PA | 665 | GD24677-PA | 187..665 | 126..594 | 462 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22551-PA | 571 | GJ22551-PA | 5..571 | 27..594 | 2228 | 72.6 | Plus |
Dvir\GJ14045-PA | 594 | GJ14045-PA | 100..594 | 110..594 | 446 | 28.1 | Plus |