BDGP Sequence Production Resources |
Search the DGRC for RE18748
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 187 |
Well: | 48 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG15390-RA |
Protein status: | RE18748.pep: gold |
Preliminary Size: | 615 |
Sequenced Size: | 969 |
Gene | Date | Evidence |
---|---|---|
CG15390 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15390 | 2002-02-22 | Blastp of sequenced clone |
CG15390 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15390 | 2008-04-29 | Release 5.5 accounting |
CG15390 | 2008-08-15 | Release 5.9 accounting |
CG15390 | 2008-12-18 | 5.12 accounting |
969 bp (969 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089593
> RE18748.complete CATTGCAAAGAAGAAGAGATCAGCTGTTCATTGTTTTGCTCGCCGATTTA AGAGGACATCGCCAAAAATGTTGCGGAAACTATTATTTAACACACAAGCT GTATTAAAACAACAGTCAAACTTACATCACATAAGGCACTTGGCAACGCC CAAGATATTGCAGCTTGAACAAATTCACATCGATGAAGCCATCAAAATAG AACCCACGTTAGCTGTATTCTCACCTGAAATCTGGCGAAGGGCCCATCAA ACTTTTCAAAACCACGGCTTGGAAACCGTGAATTTCCTTAGAATAGTTAC CGGTAACCCCGCGATTTTGAAAAGAACGCCGGACAAAATAATAAGCTGCC TGGAAATCTGGAGGGCCTGTCAATTCGGCGAGAATCTACTGCACCTGCTC CTTACGAAGTACCCCGAGTTACTGGACGTTAGCGACTCCCACCAGTTACT TTCCCACATCGGCTTCCTTCAAAGTCGCGTCTCCACCAGCAAAAATGTGT GGAAGTGTTTGATGAACAGTCCGGATTTGATAGCACAATCCGAGGTATCT ATTGAGGAGAAACTGAACTTCATCACAGACGTGATGCGCATAGAAGTGCC GGAGTTGGTTAAATCGGCAGCCCTTACCTTGTCATTCGAGGAGCTGCGTT GTCGCCACCAGTTCCTGCTTCGTTTGGGCCTCTTTAAGCCACGACCTCCG AAAGCCGATCCAAATGAGCCGACTACGAACCCCAAACTCTATCAGATTAC AGACACTTCCGAGAAGAGTTTCGCCACAAAGATTTGCCACGTCACCCTGC CGGAATACGAAGCCTTCAAGGATCTCTACGCCAAGGAACTGGAGCAAAAG TCCAGAAGAAAGGAGGAGGATGAGCTTAGTGATGAAGATGACTAATGTTA CGTTTAATTATGGTTATAGTTTGTGCCAGCAAATAAACGCTTGTAAAAAT ACGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15390-RA | 1035 | CG15390-RA | 12..967 | 1..956 | 4765 | 99.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 2374385..2374505 | 1..121 | 98 | -> | Plus |
chr2L | 2374562..2375392 | 122..953 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15390-RA | 1..828 | 68..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15390-RA | 1..828 | 68..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15390-RA | 1..828 | 68..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15390-RA | 1..828 | 68..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15390-RA | 1..828 | 68..895 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15390-RA | 1..952 | 1..953 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15390-RA | 1..952 | 1..953 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15390-RA | 1..928 | 25..953 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15390-RA | 1..952 | 1..953 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15390-RA | 1..928 | 25..953 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2374689..2374809 | 1..121 | 100 | -> | Plus |
2L | 2374866..2375696 | 122..953 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2374689..2374809 | 1..121 | 100 | -> | Plus |
2L | 2374866..2375696 | 122..953 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2374689..2374809 | 1..121 | 100 | -> | Plus |
2L | 2374866..2375696 | 122..953 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 2374689..2374809 | 1..121 | 100 | -> | Plus |
arm_2L | 2374866..2375696 | 122..953 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2374866..2375696 | 122..953 | 99 | Plus | |
2L | 2374689..2374809 | 1..121 | 100 | -> | Plus |
Translation from 0 to 894
> RE18748.hyp IAKKKRSAVHCFARRFKRTSPKMLRKLLFNTQAVLKQQSNLHHIRHLATP KILQLEQIHIDEAIKIEPTLAVFSPEIWRRAHQTFQNHGLETVNFLRIVT GNPAILKRTPDKIISCLEIWRACQFGENLLHLLLTKYPELLDVSDSHQLL SHIGFLQSRVSTSKNVWKCLMNSPDLIAQSEVSIEEKLNFITDVMRIEVP ELVKSAALTLSFEELRCRHQFLLRLGLFKPRPPKADPNEPTTNPKLYQIT DTSEKSFATKICHVTLPEYEAFKDLYAKELEQKSRRKEEDELSDEDD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15390-PA | 275 | CG15390-PA | 1..275 | 23..297 | 1423 | 100 | Plus |
Translation from 67 to 894
> RE18748.pep MLRKLLFNTQAVLKQQSNLHHIRHLATPKILQLEQIHIDEAIKIEPTLAV FSPEIWRRAHQTFQNHGLETVNFLRIVTGNPAILKRTPDKIISCLEIWRA CQFGENLLHLLLTKYPELLDVSDSHQLLSHIGFLQSRVSTSKNVWKCLMN SPDLIAQSEVSIEEKLNFITDVMRIEVPELVKSAALTLSFEELRCRHQFL LRLGLFKPRPPKADPNEPTTNPKLYQITDTSEKSFATKICHVTLPEYEAF KDLYAKELEQKSRRKEEDELSDEDD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14621-PA | 276 | GF14621-PA | 1..264 | 1..264 | 1182 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24850-PA | 275 | GG24850-PA | 1..275 | 1..275 | 1361 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10253-PA | 273 | GH10253-PA | 1..271 | 1..275 | 1042 | 70.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15390-PA | 275 | CG15390-PA | 1..275 | 1..275 | 1423 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15451-PA | 278 | GI15451-PA | 1..277 | 1..274 | 1084 | 73.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18723-PA | 280 | GL18723-PA | 1..269 | 1..265 | 1109 | 75.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13697-PA | 280 | GA13697-PA | 1..269 | 1..265 | 1107 | 75.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18334-PA | 275 | GM18334-PA | 1..265 | 1..265 | 1350 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23149-PA | 275 | GD23149-PA | 1..265 | 1..265 | 1352 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17283-PA | 283 | GJ17283-PA | 1..270 | 1..264 | 1031 | 71.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15153-PA | 282 | GK15153-PA | 1..270 | 1..267 | 1034 | 69.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18148-PA | 275 | GE18148-PA | 1..265 | 1..265 | 1326 | 94 | Plus |