Clone RE19210 Report

Search the DGRC for RE19210

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:192
Well:10
Vector:pFlc-1
Associated Gene/Transcripttlk-RN
Protein status:RE19210.pep: gold
Sequenced Size:4370

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32781 2003-01-01 Sim4 clustering to Release 3
tlk 2008-04-29 Release 5.5 accounting
tlk 2008-08-15 Release 5.9 accounting
tlk 2008-12-18 5.12 accounting

Clone Sequence Records

RE19210.complete Sequence

4370 bp (4370 high quality bases) assembled on 2006-01-24

GenBank Submission: BT024217

> RE19210.complete
AGTCGCAATTCAAACGCCATCAAAATCAAAACGGCGCCCAGCTATCAACA
ACATTTTCATCATCAAAATCTTCACCACCACCAACAACAACATCAACAAC
AACAACAACAACAACATATAACGCAAGTGCAACAACAACAACAACAACAA
CAGCAACTTTTGGTATTGCCACAGCAGCAGCAACAGCAACATTTGCGAGT
GTGCAACAATCAAATCAATAACAACAATAACAGCAGTAATAGCTGCCAAA
ACAGCTATCAATATAGTTATAACAATAATAATAACAACACCAACGCCAAC
AACAACAGCAATCAGCAGCTGCAACAACAAATTGTGAATAACAACAACAA
TCTCGAGGACGATGTGTATTATTTATTTTATAAAGATTTATATATGTCCC
CCGGCGCCCATTTGCAGATGTCCCCGCAGAACACTTCGTCCCTAAGTCAA
CACCATCCACATCAACAGCAACAGTTACAACCCCCACAGCAGCAACAACA
GCATTTCCCTAACCATCACAGCGCCCAGCAACAGTCGCAGCAGCAGCAGC
AACAGGAGCAACAGAATCCCCAGCAGCAGGCGCAACAGCAGCAGCAGATA
CTCCCACATCAACATTTGCAGCACCTGCACAAGCATCCGCATCAGCTGCA
ACTGCATCAGCAGCAGCAACAACAACTCCACCAGCAACAGCAGCAACACT
TCCACCAGCAGTCGCTGCAAGGGCTGCATCAGGGTAGCAGCAATCCGGAT
TCGAATATGAGCACTGGCTCCTCGCATAGCGAGAAGGATGTCAATGATAT
GCTGAGTGGCGGTGCAGCAACGCCAGGAGCTGCAGCAGCAGCGATTCAAC
AGCAACATCCCGCCTTTGCGCCCACACTGGGAATGCAGCAACCACCGCCG
CCCCCACCTCAACACTCCAATAATGGAGGCGAGATGGGCTACTTGTCAGC
AGGCACGACCACGACGACGTCGGTGTTAACGGTAGGCAAGCCTCGGACGC
CAGCGGAGCGGAAACGGAAGCGAAAAATGCCTCCATGTGCCACTAGTGCG
GATGAGGCGGGGAGTGGCGGTGGCTCTGGCGGAGCAGGAGCAACCGTTGT
TAACAACAGCAGCCTGAAGGGCAAATCATTGGCCTTTCGTGATATGCCCA
AGGTAAACATGAGCCTGAATCTGGGCGATCGTCTGGGAGGATCTGCAGGA
AGCGGAGTAGGAGCCGGTGGCGCCGGAAGCGGGGGAGGTGGCGCTGGTTC
CGGTTCTGGAAGCGGTGGCGGCAAAAGCGCCCGCCTGATGCTGCCAGTCA
GCGACAACAAGAAGATCAACGACTATTTCAATAAGCAGCAAACGGGCGTG
GGCGTCGGTGTGCCAGGTGGTGCGGGAGGCAATACCGCTGGCCTTCGAGG
ATCACATACGGGAGGTGGCAGCAAGTCACCCTCATCCGCCCAGCAGCAGC
AAACGGCGGCACAGCAGCAGGGAAGCGGTGTTGCGACGGGAGGCAGTGCA
GGCGGTTCCGCTGGCAACCAGGTGCAAGTGCAAACGAGCAGCGCTTACGC
CCTTTACCCACCAGCTAGTCCCCAAACCCAGACGTCACAGCAACAGCAGC
AGCAGCAACCGGGATCAGACTTTCACTATGTCAACTCCAGCAAGGCGCAG
CAACAACAGCAGCGTCAACAGCAACAGACTTCCAATCAAATGGTTCCTCC
ACACGTGGTCGTTGGCCTTGGTGGTCATCCACTGAGCCTCGCGTCCATTC
AGCAGCAGACGCCCTTATCCCAGCAGCAACAGCAGCAACAACAGCAGCAG
CAACAGCAGCAACTGGGACCACCGACCACATCGACGGCCTCCGTCGTGCC
AACGCATCCGCATCAACTCGGATCCCTGGGAGTTGTTGGGATGGTCGGTG
TGGGTGTTGGCGTGGGCGTTGGAGTAAATGTGGGTGTGGGACCACCACTG
CCACCACCACCGCCGATGGCCATGCCAGCGGCCATTATCACTTATAGTAA
GGCCACTCAAACGGAGGTGTCGCTGCATGAATTGCAGGAGCGCGAAGCGG
AGCACGAATCGGGCAAGGTGAAGCTAGACGAGATGACACGGCTGTCCGAT
GAACAAAAGTCCCAAATTGTTGGCAACCAGAAGACGATTGACCAGCACAA
GTGCCACATAGCCAAGTGTATTGATGTGGTCAAGAAGCTGTTGAAGGAGA
AGAGCAGCATCGAGAAGAAGGAGGCGCGACAGAAGTGCATGCAGAATCGC
CTCAGGCTCGGACAGTTTGTTACCCAACGAGTGGGCGCCACATTCCAGGA
GAACTGGACGGACGGCTATGCGTTCCAGGAGCTGAGTCGGCGGCAAGAAG
AAATAACCGCTGAGCGTGAAGAGATAGATCGGCAGAAAAAGCAGCTGATG
AAAAAGCGTCCGGCGGAGTCCGGACGCAAGCGCAACAACAACAGTAACCA
GAACAACCAGCAGCAGCAGCAACAGCAACACCAGCAACAGCAGCAGCAAC
AAAATTCCAACTCGAACGATTCCACGCAGCTGACGAGCGGAGTTGTTACC
GGTCCAGGCAGTGATCGTGTGAGCGTAAGCGTCGACAGCGGATTGGGTGG
CAATAATGCGGGCGCGATCGGTGGCGGAACCGTTGGTGGTGGCGTTGGAG
GTGGTGGTGTTGGAGGCGGTGGTGTCGGAGGCGGCGGTGGACGTGGACTT
TCTCGCAGCAATTCGACGCAGGCCAATCAGGCTCAATTGCTGCACAACGG
CGGTGGTGGTTCGGGCGGCAATGTCGGCAACTCGGGCGGCGTTGGCGACC
GCTTGTCAGATCGAGGAGGAGGAGGTGGCGGCATCGGCGGAAACGATAGC
GGCAGCTGCTCGGACTCGGGCACTTTCCTGAAGCCAGACCCCGTATCGGG
TGCCTACACAGCGCAGGAGTATTACGAGTACGATGAGATCCTCAAGTTGC
GACAAAATGCCCTCAAAAAGGAGGACGCCGACCTGCAGCTGGAGATGGAG
AAGCTGGAGCGGGAGCGCAATCTGCACATCCGAGAGCTCAAGCGGATTCT
TAACGAGGATCAGTCCCGCTTTAACAATCATCCCGTGCTGAATGATCGCT
ATCTTCTGTTGATGCTCCTGGGCAAGGGCGGCTTCTCAGAGGTCCACAAG
GCCTTCGACCTGAAGGAGCAACGCTATGTCGCATGTAAGGTGCACCAATT
AAACAAGGATTGGAAGGAGGATAAGAAAGCTAATTATATCAAACACGCTT
TGCGGGAATACAACATTCACAAGGCACTGGATCATCCGCGGGTCGTCAAG
CTATACGATGTCTTCGAGATCGATGCGAATTCCTTTTGCACAGTGCTCGA
ATACTGTGATGGCCACGATCTGGACTTCTATTTGAAGCAACATAAGACTA
TACCCGAGCGTGAAGCGCGCTCGATAATAATGCAGGTTGTATCTGCACTC
AAGTATCTAAATGAGATTAAGCCTCCAGTTATCCACTACGATCTGAAGCC
CGGCAACATTCTGCTTACCGAGGGCAACGTCTGCGGCGAGATTAAGATCA
CCGACTTCGGTCTGTCAAAGGTGATGGACGACGAGAATTACAATCCCGAT
CACGGCATGGATCTGACCTCTCAGGGGGCGGGAACCTACTGGTATCTGCC
ACCCGAGTGCTTTGTCGTGGGCAAAAATCCGCCGAAAATCTCCTCCAAAG
TGGACGTATGGAGTGTGGGTGTTATCTTCTACCAGTGTCTGTACGGCAAA
AAGCCCTTCGGTCACAATCAGTCGCAGGCCACGATTCTCGAGGAGAATAC
GATCCTGAAGGCCACCGAAGTGCAGTTCTCCAACAAGCCAACCGTTTCTA
ACGAGGCCAAGAGTTTCATTCGGGGATGCTTGGCCTATCGCAAGGAGGAT
CGCATGGATGTGTTCGCACTGGCCAGGCACGAGTACATTCAGCCACCGAT
ACCGAAACATGGGCGCGGTTCGCTCAATCAGCAACAGCAGGCGCAACAAC
AGCAGCAGCAACAACAGCAACAGCAGCAGCAACAGTCGTCGACGTCACAG
GCCAATTCTACAGGCCAGACATCTTTCTCTGCCCACATGTTTGGCAATAT
GAATCAGTCGAGTTCGTCCTAGCTGCCAACCAAGCGCAATTCGAACTCAT
AATTCGCCGCCGCCGCAGTAGCAGCAGCTACATTAGCTGCCAGTAGTCAA
CAGCAACTTCAACACCAGCAACAGCAACTCCAAATCCAGCAATACCAGCA
GAATCAGCAACTTCATTTGCAAAACAGCAGTAGCAATTATGCGGCCACGC
TTCTAGATGCAGCGGCCTTTTGCTACGAAACCGTGATGGATGCAGCCCAC
TTCCAAAAAAAAAAAAAAAA

RE19210.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:19:44
Subject Length Description Subject Range Query Range Score Percent Strand
tlk.i 5191 tlk.i 271..4628 1..4358 21760 99.9 Plus
tlk-RB 4624 tlk-RB 271..4624 1..4354 21740 99.9 Plus
tlk.a 5358 tlk.a 69..2350 393..2674 11350 99.8 Plus
tlk.a 5358 tlk.a 2311..4019 2650..4358 8530 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:54:35
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 3675039..3676956 394..2299 9360 99.3 Plus
chrX 22417052 chrX 3677070..3677837 2296..3063 3840 100 Plus
chrX 22417052 chrX 3679538..3680032 3860..4354 2475 100 Plus
chrX 22417052 chrX 3655875..3656235 33..393 1790 99.7 Plus
chrX 22417052 chrX 3678989..3679209 3641..3861 1105 100 Plus
chrX 22417052 chrX 3678683..3678893 3433..3643 1055 100 Plus
chrX 22417052 chrX 3678424..3678622 3239..3437 980 99.5 Plus
chrX 22417052 chrX 3677920..3678102 3060..3242 915 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:39:59 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:54:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 3781655..3783560 394..2299 9515 99.9 Plus
X 23542271 X 3783674..3784441 2296..3063 3840 100 Plus
X 23542271 X 3786142..3786640 3860..4358 2495 100 Plus
X 23542271 X 3762497..3762857 33..393 1790 99.7 Plus
X 23542271 X 3785593..3785813 3641..3861 1105 100 Plus
X 23542271 X 3785287..3785497 3433..3643 1055 100 Plus
X 23542271 X 3785028..3785226 3239..3437 980 99.5 Plus
X 23542271 X 3784524..3784706 3060..3242 915 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:12:32
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 3789753..3791658 394..2299 9515 99.9 Plus
X 23527363 X 3791772..3792539 2296..3063 3840 100 Plus
X 23527363 X 3794240..3794738 3860..4358 2495 100 Plus
X 23527363 X 3770595..3770955 33..393 1790 99.7 Plus
X 23527363 X 3793691..3793911 3641..3861 1105 100 Plus
X 23527363 X 3793385..3793595 3433..3643 1055 100 Plus
X 23527363 X 3793126..3793324 3239..3437 980 99.4 Plus
X 23527363 X 3792622..3792804 3060..3242 915 100 Plus
3L 28103327 3L 14017896..14017951 4034..3979 205 91 Minus
3L 28103327 3L 9830469..9830524 4034..3979 205 91 Minus
2R 25260384 2R 7997148..7997204 4035..3979 195 89.4 Minus
3R 31820162 3R 16550743..16550799 4035..3979 195 89.4 Minus
X 23527363 X 9063832..9063888 4035..3979 180 87.7 Minus
X 23527363 X 9063820..9063876 4035..3979 165 85.9 Minus
X 23527363 X 9063814..9063870 4035..3979 165 85.9 Minus
X 23527363 X 9063796..9063852 4035..3979 165 85.9 Minus
X 23527363 X 9063809..9063864 4034..3979 160 85.7 Minus
X 23527363 X 19552828..19552869 695..654 150 90.4 Minus
X 23527363 X 9063838..9063894 4035..3979 150 84.2 Minus
X 23527363 X 19552498..19552538 4019..3979 145 90.2 Minus
X 23527363 X 9063791..9063840 4028..3979 145 86 Minus
X 23527363 X 9065297..9065376 698..619 145 78.7 Minus
3L 28103327 3L 14018819..14018865 695..649 145 87.2 Minus
3L 28103327 3L 14020841..14020967 698..572 140 74 Minus
Blast to na_te.dros performed 2019-03-16 18:54:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2319..2988 169..859 529 57.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2316..2545 448..677 465 68 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6951 448..674 387 66.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6758..7016 448..709 375 63 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2364..2781 448..859 367 59.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6413..7200 82..857 328 54.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6521..6852 3970..4285 297 60.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2547..2857 1549..1868 290 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2596..2869 3980..4274 253 59.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2362..2668 3977..4288 242 59 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6755..6886 4160..4286 242 68.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2447 4163..4286 238 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6742..6871 4156..4286 238 67.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2276..2551 3951..4243 237 59.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2431 4160..4265 235 71.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6731..6967 1632..1872 230 60.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6735..7028 1517..1813 226 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2430..2665 1573..1808 224 58.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6680..7112 231..697 222 56.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2386..2679 3977..4276 214 58.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2432 4165..4286 208 66.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..6817 1588..1677 205 72 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2399 4198..4286 204 71.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6839 4198..4316 204 68.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2532 1590..1832 202 59.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2339..2549 1587..1799 194 59 Plus
roo 9092 roo DM_ROO 9092bp 1072..1170 4156..4256 193 68.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6932 1593..1819 187 59 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2319..2538 1588..1813 178 57 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2403..2664 1588..1835 176 56.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6794..6915 1559..1676 175 66.9 Plus
roo 9092 roo DM_ROO 9092bp 1035..1162 4143..4280 171 64 Plus
roo 9092 roo DM_ROO 9092bp 1067..1160 1579..1682 171 70.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6775..7041 1587..1852 168 59 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2787..2999 1588..1806 161 58.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6817..6920 4156..4261 157 67.6 Plus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 7127..7396 1569..1834 154 54.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2334..2480 815..973 153 61 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2808..2946 1559..1692 151 62.7 Plus
TART-C 11124 TART-C TARTC 11124bp 8561..8831 1551..1817 150 54.7 Plus
roo 9092 roo DM_ROO 9092bp 1061..1146 1588..1676 149 69.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2361..2442 1588..1675 146 68.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2736..2994 1575..1835 146 56 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6749..6828 1588..1676 144 69.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2454..2496 1771..1813 143 81.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2897..2989 4162..4259 136 63.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1502..1546 1632..1676 135 77.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2764..2834 4214..4286 135 68.9 Plus
TART-C 11124 TART-C TARTC 11124bp 7047..7128 1585..1673 131 66.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1590 4163..4234 128 65.8 Plus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 5592..5673 1585..1673 122 65.2 Plus

RE19210.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:55:30 Download gff for RE19210.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 3678686..3678891 3436..3641 100 -> Plus
chrX 3642439..3642471 1..33 100 -> Plus
chrX 3655876..3655923 34..81 100 == Plus
chrX 3656000..3656112 158..270 100 == Plus
chrX 3656173..3656235 331..393 98 -> Plus
chrX 3675039..3675092 394..447 100 == Plus
chrX 3675149..3675176 504..531 100 == Plus
chrX 3675388..3676955 743..2298 96 -> Plus
chrX 3677073..3677407 2299..2633 86 == Plus
chrX 3677465..3677837 2691..3063 100 -> Plus
chrX 3677924..3678102 3064..3242 100 -> Plus
chrX 3678428..3678620 3243..3435 100 -> Plus
chrX 3678990..3679209 3642..3861 100 -> Plus
chrX 3679540..3679656 3862..3978 100 == Plus
chrX 3679714..3679833 4036..4155 100 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:27:18 Download gff for RE19210.complete
Subject Subject Range Query Range Percent Splice Strand
tlk-RB 271..4392 1..4122 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:34:44 Download gff for RE19210.complete
Subject Subject Range Query Range Percent Splice Strand
tlk-RB 271..4392 1..4122 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:19:00 Download gff for RE19210.complete
Subject Subject Range Query Range Percent Splice Strand
tlk-RB 271..4392 1..4122 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:08:58 Download gff for RE19210.complete
Subject Subject Range Query Range Percent Splice Strand
tlk-RB 271..4392 1..4122 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:54:30 Download gff for RE19210.complete
Subject Subject Range Query Range Percent Splice Strand
tlk-RB 271..4392 1..4122 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:27:17 Download gff for RE19210.complete
Subject Subject Range Query Range Percent Splice Strand
tlk-RB 271..4624 1..4354 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:34:44 Download gff for RE19210.complete
Subject Subject Range Query Range Percent Splice Strand
tlk-RB 271..4624 1..4354 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:19:00 Download gff for RE19210.complete
Subject Subject Range Query Range Percent Splice Strand
tlk-RB 271..4624 1..4354 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:08:59 Download gff for RE19210.complete
Subject Subject Range Query Range Percent Splice Strand
tlk-RB 271..4624 1..4354 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:54:30 Download gff for RE19210.complete
Subject Subject Range Query Range Percent Splice Strand
tlk-RB 271..4624 1..4354 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:55:30 Download gff for RE19210.complete
Subject Subject Range Query Range Percent Splice Strand
X 3749062..3749094 1..33 100 -> Plus
X 3784528..3784706 3064..3242 100 -> Plus
X 3762498..3762857 34..393 99 -> Plus
X 3781655..3783559 394..2298 99 -> Plus
X 3783677..3784441 2299..3063 100 -> Plus
X 3785032..3785224 3243..3435 100 -> Plus
X 3785290..3785495 3436..3641 100 -> Plus
X 3785594..3785813 3642..3861 100 -> Plus
X 3786144..3786636 3862..4354 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:55:30 Download gff for RE19210.complete
Subject Subject Range Query Range Percent Splice Strand
X 3749062..3749094 1..33 100 -> Plus
X 3784528..3784706 3064..3242 100 -> Plus
X 3762498..3762857 34..393 99 -> Plus
X 3781655..3783559 394..2298 99 -> Plus
X 3783677..3784441 2299..3063 100 -> Plus
X 3785032..3785224 3243..3435 100 -> Plus
X 3785290..3785495 3436..3641 100 -> Plus
X 3785594..3785813 3642..3861 100 -> Plus
X 3786144..3786636 3862..4354 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:55:30 Download gff for RE19210.complete
Subject Subject Range Query Range Percent Splice Strand
X 3749062..3749094 1..33 100 -> Plus
X 3784528..3784706 3064..3242 100 -> Plus
X 3762498..3762857 34..393 99 -> Plus
X 3781655..3783559 394..2298 99 -> Plus
X 3783677..3784441 2299..3063 100 -> Plus
X 3785032..3785224 3243..3435 100 -> Plus
X 3785290..3785495 3436..3641 100 -> Plus
X 3785594..3785813 3642..3861 100 -> Plus
X 3786144..3786636 3862..4354 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:19:00 Download gff for RE19210.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 3679627..3679846 3642..3861 100 -> Plus
arm_X 3679065..3679257 3243..3435 100 -> Plus
arm_X 3679323..3679528 3436..3641 100 -> Plus
arm_X 3643095..3643127 1..33 100 -> Plus
arm_X 3656531..3656890 34..393 99 -> Plus
arm_X 3675688..3677592 394..2298 99 -> Plus
arm_X 3677710..3678474 2299..3063 100 -> Plus
arm_X 3678561..3678739 3064..3242 100 -> Plus
arm_X 3680177..3680669 3862..4354 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:58:42 Download gff for RE19210.complete
Subject Subject Range Query Range Percent Splice Strand
X 3757160..3757192 1..33 100 -> Plus
X 3770596..3770955 34..393 99 -> Plus
X 3789753..3791657 394..2298 99 -> Plus
X 3791775..3792539 2299..3063 100 -> Plus
X 3792626..3792804 3064..3242 100 -> Plus
X 3793130..3793322 3243..3435 100 -> Plus
X 3793388..3793593 3436..3641 100 -> Plus
X 3793692..3793911 3642..3861 100 -> Plus
X 3794242..3794734 3862..4354 100   Plus

RE19210.pep Sequence

Translation from 0 to 4121

> RE19210.pep
SRNSNAIKIKTAPSYQQHFHHQNLHHHQQQHQQQQQQQHITQVQQQQQQQ
QQLLVLPQQQQQQHLRVCNNQINNNNNSSNSCQNSYQYSYNNNNNNTNAN
NNSNQQLQQQIVNNNNNLEDDVYYLFYKDLYMSPGAHLQMSPQNTSSLSQ
HHPHQQQQLQPPQQQQQHFPNHHSAQQQSQQQQQQEQQNPQQQAQQQQQI
LPHQHLQHLHKHPHQLQLHQQQQQQLHQQQQQHFHQQSLQGLHQGSSNPD
SNMSTGSSHSEKDVNDMLSGGAATPGAAAAAIQQQHPAFAPTLGMQQPPP
PPPQHSNNGGEMGYLSAGTTTTTSVLTVGKPRTPAERKRKRKMPPCATSA
DEAGSGGGSGGAGATVVNNSSLKGKSLAFRDMPKVNMSLNLGDRLGGSAG
SGVGAGGAGSGGGGAGSGSGSGGGKSARLMLPVSDNKKINDYFNKQQTGV
GVGVPGGAGGNTAGLRGSHTGGGSKSPSSAQQQQTAAQQQGSGVATGGSA
GGSAGNQVQVQTSSAYALYPPASPQTQTSQQQQQQQPGSDFHYVNSSKAQ
QQQQRQQQQTSNQMVPPHVVVGLGGHPLSLASIQQQTPLSQQQQQQQQQQ
QQQQLGPPTTSTASVVPTHPHQLGSLGVVGMVGVGVGVGVGVNVGVGPPL
PPPPPMAMPAAIITYSKATQTEVSLHELQEREAEHESGKVKLDEMTRLSD
EQKSQIVGNQKTIDQHKCHIAKCIDVVKKLLKEKSSIEKKEARQKCMQNR
LRLGQFVTQRVGATFQENWTDGYAFQELSRRQEEITAEREEIDRQKKQLM
KKRPAESGRKRNNNSNQNNQQQQQQQHQQQQQQQNSNSNDSTQLTSGVVT
GPGSDRVSVSVDSGLGGNNAGAIGGGTVGGGVGGGGVGGGGVGGGGGRGL
SRSNSTQANQAQLLHNGGGGSGGNVGNSGGVGDRLSDRGGGGGGIGGNDS
GSCSDSGTFLKPDPVSGAYTAQEYYEYDEILKLRQNALKKEDADLQLEME
KLERERNLHIRELKRILNEDQSRFNNHPVLNDRYLLLMLLGKGGFSEVHK
AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVK
LYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIPEREARSIIMQVVSAL
KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDDENYNPD
HGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGK
KPFGHNQSQATILEENTILKATEVQFSNKPTVSNEAKSFIRGCLAYRKED
RMDVFALARHEYIQPPIPKHGRGSLNQQQQAQQQQQQQQQQQQQQSSTSQ
ANSTGQTSFSAHMFGNMNQSSSS*

RE19210.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:15:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19156-PA 1271 GF19156-PA 13..1271 132..1373 3725 81.2 Plus
Dana\GF17461-PA 1591 GF17461-PA 48..321 1013..1313 306 30 Plus
Dana\GF11717-PA 1419 GF11717-PA 486..684 1033..1253 288 35.6 Plus
Dana\GF17771-PA 525 GF17771-PA 15..265 1040..1313 283 28.8 Plus
Dana\GF20823-PA 613 GF20823-PA 28..291 1039..1313 263 29.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:15:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18668-PA 1275 GG18668-PA 13..1275 132..1373 6284 95.9 Plus
Dere\GG17493-PA 1550 GG17493-PA 51..321 1016..1313 300 30 Plus
Dere\GG17382-PA 520 GG17382-PA 15..261 1040..1306 298 31.1 Plus
Dere\GG21978-PA 1223 GG21978-PA 495..693 1033..1253 289 35.6 Plus
Dere\GG18438-PA 582 GG18438-PA 28..291 1039..1313 268 29.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:16:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24215-PA 1399 GH24215-PA 978..1399 952..1373 2213 99.3 Plus
Dgri\GH22348-PA 525 GH22348-PA 4..265 1028..1313 281 29.9 Plus
Dgri\GH24413-PA 603 GH24413-PA 28..291 1039..1313 266 29.6 Plus
Dgri\GH24405-PA 1622 GH24405-PA 146..412 1040..1331 266 29.2 Plus
Dgri\GH13656-PA 462 GH13656-PA 163..368 1040..1254 237 30.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:51:05
Subject Length Description Subject Range Query Range Score Percent Strand
Tlk-PB 1463 CG34412-PB 91..1463 1..1373 7225 99.9 Plus
Tlk-PG 1489 CG34412-PG 81..1489 16..1373 6621 91.1 Plus
Tlk-PN 1242 CG34412-PN 1..1242 132..1373 6517 100 Plus
Tlk-PM 1242 CG34412-PM 1..1242 132..1373 6517 100 Plus
Tlk-PK 1265 CG34412-PK 24..1265 132..1373 6517 100 Plus
Tlk-PC 1254 CG32782-PC 13..1254 132..1373 6517 100 Plus
Tlk-PJ 1266 CG34412-PJ 25..1266 132..1373 6517 100 Plus
Tlk-PI 1242 CG34412-PI 1..1242 132..1373 6517 100 Plus
Tlk-PH 1266 CG34412-PH 25..1266 132..1373 6517 100 Plus
Tlk-PF 1266 CG34412-PF 25..1266 132..1373 6517 100 Plus
Tlk-PE 1255 CG34412-PE 14..1255 132..1373 6517 100 Plus
Tlk-PL 1011 CG34412-PL 25..664 132..771 3314 99.2 Plus
Tlk-PL 1011 CG34412-PL 478..1011 817..1373 1901 70.7 Plus
Smr-PG 3607 CG4013-PG 55..696 12..647 512 29.6 Plus
Smr-PF 3601 CG4013-PF 43..690 1..647 491 28.3 Plus
Smr-PE 3601 CG4013-PE 43..690 1..647 491 28.3 Plus
Smr-PD 3601 CG4013-PD 43..690 1..647 491 28.3 Plus
fs(1)h-PB 2038 CG2252-PB 1389..1931 29..515 368 28.5 Plus
fs(1)h-PG 2046 CG2252-PG 1397..1939 29..515 368 28.5 Plus
mam-PD 1594 CG8118-PD 744..1515 3..641 310 24.6 Plus
mam-PB 1594 CG8118-PB 744..1515 3..641 310 24.6 Plus
mam-PA 1594 CG8118-PA 744..1515 3..641 310 24.6 Plus
sr-PE 906 CG7847-PE 251..492 72..306 306 36.2 Plus
sr-PB 906 CG7847-PB 251..492 72..306 306 36.2 Plus
sr-PA 1186 CG7847-PA 531..772 72..306 306 36.2 Plus
sr-PD 1271 CG7847-PD 531..772 72..306 306 36.2 Plus
Aduk-PB 465 CG8866-PB 11..265 1036..1313 301 29.1 Plus
Aduk-PA 520 CG8866-PA 11..265 1036..1313 301 29.1 Plus
Ncoa6-PC 2265 CG14023-PC 659..1257 22..629 299 27.2 Plus
Ncoa6-PD 2266 CG14023-PD 660..1258 22..629 299 27.2 Plus
Ncoa6-PF 2467 CG14023-PF 660..1258 22..629 299 27.2 Plus
Rim-PAA 1358 CG33547-PAA 189..698 30..534 292 26 Plus
Rim-PS 1399 CG33547-PS 189..698 30..534 292 26 Plus
Rim-PQ 1931 CG33547-PQ 189..698 30..534 292 26 Plus
Rim-PR 1941 CG33547-PR 189..698 30..534 292 26 Plus
Rim-PX 1955 CG33547-PX 189..698 30..534 292 26 Plus
Rim-PU 1955 CG33547-PU 189..698 30..534 292 26 Plus
Rim-PV 1965 CG33547-PV 189..698 30..534 292 26 Plus
Rim-PW 2595 CG33547-PW 189..698 30..534 292 26 Plus
Rim-PP 2792 CG33547-PP 189..698 30..534 292 26 Plus
Rim-PK 2798 CG33547-PK 189..698 30..534 292 26 Plus
Rim-PF 2798 CG33547-PF 189..698 30..534 292 26 Plus
mam-PD 1594 CG8118-PD 642..1286 31..659 283 25 Plus
mam-PB 1594 CG8118-PB 642..1286 31..659 283 25 Plus
mam-PA 1594 CG8118-PA 642..1286 31..659 283 25 Plus
PhKgamma-PF 391 CG1830-PF 28..308 1039..1330 283 29 Plus
kto-PA 2531 CG8491-PA 1948..2529 29..608 283 26.1 Plus
CG43143-PD 1180 CG11870-PD 51..321 1016..1313 282 29.4 Plus
CG43143-PG 1199 CG43143-PG 51..321 1016..1313 282 29.4 Plus
CG43143-PB 1427 CG11870-PB 51..321 1016..1313 282 29.4 Plus
CG43143-PC 1427 CG11870-PC 51..321 1016..1313 282 29.4 Plus
CG43143-PA 1427 CG11870-PA 51..321 1016..1313 282 29.4 Plus
CG43143-PF 1532 CG43143-PF 51..321 1016..1313 282 29.4 Plus
PhKgamma-PH 419 CG1830-PH 28..290 1039..1312 275 29.7 Plus
PhKgamma-PB 419 CG1830-PB 28..290 1039..1312 275 29.7 Plus
kto-PA 2531 CG8491-PA 1943..2486 155..647 251 27.4 Plus
mam-PD 1594 CG8118-PD 21..434 525..947 247 26.6 Plus
mam-PB 1594 CG8118-PB 21..434 525..947 247 26.6 Plus
mam-PA 1594 CG8118-PA 21..434 525..947 247 26.6 Plus
sr-PE 906 CG7847-PE 363..696 13..281 208 30 Plus
sr-PB 906 CG7847-PB 363..696 13..281 208 30 Plus
sr-PA 1186 CG7847-PA 643..976 13..281 208 30 Plus
sr-PD 1271 CG7847-PD 643..976 13..281 208 30 Plus
kto-PA 2531 CG8491-PA 2139..2495 5..418 190 25.7 Plus
Smr-PG 3607 CG4013-PG 19..169 73..260 187 33.5 Plus
mam-PD 1594 CG8118-PD 552..1015 406..909 184 24.3 Plus
mam-PB 1594 CG8118-PB 552..1015 406..909 184 24.3 Plus
mam-PA 1594 CG8118-PA 552..1015 406..909 184 24.3 Plus
sr-PE 906 CG7847-PE 272..581 1..300 181 27.4 Plus
sr-PB 906 CG7847-PB 272..581 1..300 181 27.4 Plus
sr-PA 1186 CG7847-PA 552..861 1..300 181 27.4 Plus
sr-PD 1271 CG7847-PD 552..861 1..300 181 27.4 Plus
Smr-PG 3607 CG4013-PG 327..506 804..972 178 33.5 Plus
Smr-PF 3601 CG4013-PF 321..500 804..972 178 33.5 Plus
Smr-PE 3601 CG4013-PE 321..500 804..972 178 33.5 Plus
Smr-PD 3601 CG4013-PD 321..500 804..972 178 33.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:16:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23605-PA 518 GI23605-PA 15..261 1040..1306 283 30.9 Plus
Dmoj\GI13469-PA 778 GI13469-PA 12..268 1032..1313 263 31.7 Plus
Dmoj\GI17408-PA 462 GI17408-PA 151..368 1028..1254 246 30.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:16:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12999-PA 757 GL12999-PA 160..745 248..816 1282 64.2 Plus
Dper\GL23688-PA 1597 GL23688-PA 56..326 1016..1313 290 30 Plus
Dper\GL10531-PA 1212 GL10531-PA 483..716 1033..1290 286 32.8 Plus
Dper\GL13732-PA 468 GL13732-PA 4..261 1028..1306 280 30.1 Plus
Dper\GL15144-PA 605 GL15144-PA 28..291 1039..1313 263 29.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:17:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25779-PA 1298 GA25779-PA 164..1298 248..1373 3428 75.5 Plus
Dpse\GA21378-PB 462 GA21378-PB 4..261 1028..1306 295 30.5 Plus
Dpse\GA26704-PB 1439 GA26704-PB 56..326 1016..1313 288 30 Plus
Dpse\GA21378-PA 520 GA21378-PA 4..261 1028..1306 287 30.3 Plus
Dpse\GA26704-PC 1033 GA26704-PC 56..326 1016..1313 285 30 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:17:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12304-PA 1378 GM12304-PA 13..1254 132..1373 6480 98.8 Plus
Dsec\GM26268-PA 520 GM26268-PA 15..261 1040..1306 295 30.9 Plus
Dsec\GM23873-PA 1565 GM23873-PA 51..317 1016..1313 294 29.4 Plus
Dsec\GM21966-PA 1192 GM21966-PA 469..667 1033..1253 285 35.6 Plus
Dsec\GM13103-PA 609 GM13103-PA 113..323 1089..1313 270 31.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:17:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16650-PA 1362 GD16650-PA 13..1238 132..1373 6364 97.2 Plus
Dsim\GD20804-PA 520 GD20804-PA 15..261 1040..1306 296 30.9 Plus
Dsim\GD18682-PA 1567 GD18682-PA 51..317 1016..1313 295 29.4 Plus
Dsim\GD17041-PA 593 GD17041-PA 93..303 1089..1313 271 31.7 Plus
Dsim\GD20665-PA 603 GD20665-PA 63..314 1034..1313 269 32 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:17:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19333-PA 1271 GJ19333-PA 13..1271 132..1373 3232 65.9 Plus
Dvir\GJ23578-PA 496 GJ23578-PA 4..261 1028..1306 303 31.6 Plus
Dvir\GJ23554-PA 1365 GJ23554-PA 47..320 1013..1313 299 30 Plus
Dvir\GJ22300-PA 859 GJ22300-PA 21..275 1034..1314 242 29.7 Plus
Dvir\GJ18340-PA 462 GJ18340-PA 163..367 1040..1253 236 30.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:17:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10213-PA 1318 GK10213-PA 155..1318 246..1373 3270 71.8 Plus
Dwil\GK12830-PA 2853 GK12830-PA 59..276 1016..1253 298 33.5 Plus
Dwil\GK10190-PA 802 GK10190-PA 2..255 1032..1314 291 31.4 Plus
Dwil\GK11728-PA 524 GK11728-PA 4..261 1028..1306 289 31 Plus
Dwil\GK20076-PA 419 GK20076-PA 28..290 1039..1312 272 29.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:18:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16310-PA 1392 GE16310-PA 13..1265 132..1373 6282 96 Plus
Dyak\GE24785-PA 520 GE24785-PA 15..261 1040..1306 300 31.5 Plus
Dyak\GE26024-PA 1476 GE26024-PA 56..326 1016..1313 300 30 Plus
Dyak\GE12057-PA 1211 GE12057-PA 482..680 1033..1253 285 35.6 Plus
Dyak\GE15660-PA 606 GE15660-PA 28..291 1039..1313 264 29.3 Plus

RE19210.hyp Sequence

Translation from 0 to 4121

> RE19210.hyp
SRNSNAIKIKTAPSYQQHFHHQNLHHHQQQHQQQQQQQHITQVQQQQQQQ
QQLLVLPQQQQQQHLRVCNNQINNNNNSSNSCQNSYQYSYNNNNNNTNAN
NNSNQQLQQQIVNNNNNLEDDVYYLFYKDFYMSPGAHLQMSPQNTSSLSQ
HHPHQQQQLQPPQQQQQHFPNHHSAQQQSQQQQQQEQQNPQQQAQQQQQI
LPHQHLQHLHKHPHQLQLHQQQQQQLHQQQQQHFHQQSLQGLHQGSSNPD
SNMSTGSSHSEKDVNDMLSGGAATPGAAAAAIQQQHPAFAPTLGMQQPPP
PPPQHSNNGGEMGYLSAGTTTTTSVLTVGKPRTPAERKRKRKMPPCATSA
DEAGSGGGSGGAGATVVNNSSLKGKSLAFRDMPKVNMSLNLGDRLGGSAG
SGVGAGGAGSGGGGAGSGSGSGGGKSARLMLPVSDNKKINDYFNKQQTGV
GVGVPGGAGGNTAGLRGSHTGGGSKSPSSAQQQQTAAQQQGSGVATGGSA
GGSAGNQVQVQTSSAYALYPPASPQTQTSQQQQQQQPGSDFHYVNSSKAQ
QQQQRQQQQTSNQMVPPHVVVGLGGHPLSLASIQQQTPLSQQQQQQQQQQ
QQQQLGPPTTSTASVVPTHPHQLGSLGVVGMVGVGVGVGVGVNVGVGPPL
PPPPPMAMPAAIITYSKATQTEVSLHELQEREAEHESGKVKLDEMTRLSD
EQKSQIVGNQKTIDQHKCHIAKCIDVVKKLLKEKSSIEKKEARQKCMQNR
LRLGQFVTQRVGATFQENWTDGYAFQELSRRQEEITAEREEIDRQKKQLM
KKRPAESGRKRNNNSNQNNQQQQQQQHQQQQQQQNSNSNDSTQLTSGVVT
GPGSDRVSVSVDSGLGGNNAGAIGGGTVGGGVGGGGVGGGGVGGGGGRGL
SRSNSTQANQAQLLHNGGGGSGGNVGNSGGVGDRLSDRGGGGGGIGGNDS
GSCSDSGTFLKPDPVSGAYTAQEYYEYDEILKLRQNALKKEDADLQLEME
KLERERNLHIRELKRILNEDQSRFNNHPVLNDRYLLLMLLGKGGFSEVHK
AFDLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVK
LYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIPEREARSIIMQVVSAL
KYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDDENYNPD
HGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGK
KPFGHNQSQATILEENTILKATEVQFSNKPTVSNEAKSFIRGCLAYRKED
RMDVFALARHEYIQPPIPKHGRGSLNQQQQAQQQQQQQQQQQQQQSSTSQ
ANSTGQTSFSAHMFGNMNQSSSS*

RE19210.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:35:51
Subject Length Description Subject Range Query Range Score Percent Strand
tlk-PB 1463 CG34412-PB 91..1463 1..1373 7231 100 Plus
tlk-PG 1489 CG34412-PG 81..1489 16..1373 6621 91.1 Plus
tlk-PE 1255 CG34412-PE 12..1255 130..1373 6521 99.9 Plus
tlk-PN 1242 CG34412-PN 1..1242 132..1373 6517 100 Plus
tlk-PC 1254 CG32782-PC 13..1254 132..1373 6517 100 Plus