Clone RE19466 Report

Gene	Date	Evidence
CG14693	2002-01-01	Sim4 clustering to Release 2
CG14693	2002-02-22	Blastp of sequenced clone
CG14693	2008-04-29	Release 5.5 accounting
CG14693	2008-04-29	Picked prior to 5.5
CG14693	2008-08-15	Release 5.9 accounting
CG14693	2008-12-18	5.12 accounting

Clone Sequence Records

RE19466.complete Sequence

1167 bp (1167 high quality bases) assembled on 2002-02-22

GenBank Submission: AY089599

> RE19466.complete
AGTTCGCCAGCAACTATTGAACGATTCACTTTGCAGCCTACTGCGAACTG
CTCGTCCTGTTCGACTATGATTTTGCACCGATTCTTGGGGCCTACATGAC
CAAGATTTGGGAGGAGAAGAAGCGGGCCCTCAAGGCACTGGACTACTTTG
ACTTTCTCGATGACGATCAGATCGTGGAAGCTTGCCGATATGGGAGGCTG
AAGCAATTCGATCCACTGGATACCATATTCTGTGAGGATATAGGATCCAT
GACCAATGTCCACTTCGTGCTCAGTGGAGAATGTCTGATACTCCAGTGTC
TGAATATAAAGGTTACTATGAAAAGGGGTAAAAAGGTATATGATCTTTTG
CCGGCGTCGGAAGGCGATGTGTCCAAAATGTTTAGAAAAGCCGTGAGATC
AACATTTTCCTCGCAAAGTACCAACGAAGATCAGTCAAAAATAGATATTC
TTGATCTTGTGGCAAGTACGAGTTCCAGTTCCACGGGAGATGCGCAAAAA
AGTGCTCTCAACCGCAAGACACCCACATTTGAAAGCCATTTCATCGATGT
GGGTACCATAACATTTGGAGGCATTTTCGGCTTGGGCGAGAAAATGGAAA
ATCGCGTGATAATGGCAAGGAGCACGGTTCAATGCCTGATACTTCCCAGA
TTTTTCCTGCTGGAAAAGAAACAAAATCCCGGCAATGTTTGGGAGCGCAG
ACTGTTGTATGTGGGCGTCATGGTTCCATCCAGGGAAGCCCTTTTTGCCC
ACTATCGTAAAGCTTGCGACTGGAAGAAATTCAAAAACGACCTAATTTCC
GAGACCTTGAAGCCCTCCGATAATGACATCACACACATCGAAGACGTTCC
CATAATTTGCAGAATTGTAGAATCACCAGAGGATCTCAATTAGTTGTTGA
AAATAAATTGTTGATTATGGGGCGGTTATGTATTTTCCAGTTGAGTCAAA
AGTATCAGCTAATTATGACAATTTGGTTCAGCTGAAAAATATAACAACAC
TCGCCCGATAAATTAAACTGTATTTATATAATTGCAAATAAATGGTTGCA
ATAAATAGTTTTGAGTCTATTAAATGGACCGTTCCGAATATGAACTAAGA
CCAACGCTGAAAATTAAGTTTTGCCAAAATAAAACGAATCAAAATTTCGG
GAAAAAAAAAAAAAAAA

RE19466.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:26:06

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
CG14693-RB	1225	CG14693-RB	75..1225	1..1151	5755	100	Plus
CG14693-RC	1753	CG14693-RC	635..1753	33..1151	5580	99.9	Plus
CG12698-RA	2146	CG12698-RA	1552..1659	528..635	240	81.4	Plus

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:06:09

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chr3R	27901430	chr3R	6637094..6637728	1151..517	3145	99.7	Minus
chr3R	27901430	chr3R	6638311..6638519	518..310	1045	100	Minus
chr3R	27901430	chr3R	6638981..6639150	170..1	850	100	Minus
chr3R	27901430	chr3R	6638571..6638715	313..169	725	100	Minus
chr3R	27901430	chr3R	828057..828187	1021..1151	640	99.2	Plus
chrU	10048995	chrU	1548505..1548635	1151..1021	640	99.2	Minus
chrU	10048995	chrU	1559139..1559269	1151..1021	640	99.2	Minus
chrU	10048995	chrU	5673771..5673901	1151..1021	640	99.2	Minus
chrU	10048995	chrU	7345788..7345918	1021..1151	640	99.2	Plus
chrU	10048995	chrU	8799374..8799504	1151..1021	640	99.2	Minus
chr3RHet	2517486	chr3RHet	153620..153750	1021..1151	640	99.2	Plus
chr3L	24539361	chr3L	10051867..10051997	1021..1151	640	99.2	Plus
chr3L	24539361	chr3L	20316858..20316988	1021..1151	640	99.2	Plus
chr3L	24539361	chr3L	23813740..23813870	1021..1151	640	99.2	Plus
chr2RHet	3288813	chr2RHet	1464392..1464522	1021..1151	640	99.2	Plus
chr2RHet	3288813	chr2RHet	2360130..2360260	1021..1151	640	99.2	Plus
chrU	10048995	chrU	6247353..6247479	1151..1025	635	100	Minus
chrU	10048995	chrU	6400053..6400179	1151..1025	635	100	Minus
chrU	10048995	chrU	7157522..7157648	1151..1025	635	100	Minus
chr3L	24539361	chr3L	23061194..23061320	1025..1151	635	100	Plus
chrU	10048995	chrU	2940760..2940890	1021..1151	625	98.5	Plus
chrX	22417052	chrX	14200756..14200886	1151..1021	625	98.5	Minus
chr3LHet	2555433	chr3LHet	1127851..1127981	1151..1021	625	98.5	Minus
chr3LHet	2555433	chr3LHet	2305261..2305391	1151..1021	625	98.5	Minus
chr3LHet	2555433	chr3LHet	2315152..2315282	1151..1021	625	98.5	Minus
chr2R	21145070	chr2R	1789476..1789606	1021..1151	625	98.5	Plus
chr3L	24539361	chr3L	1512977..1513103	1151..1025	620	99.2	Minus
chr3L	24539361	chr3L	11255371..11255497	1025..1151	620	99.2	Plus
chr2RHet	3288813	chr2RHet	861077..861203	1151..1025	620	99.2	Minus
chr2R	21145070	chr2R	5621475..5621601	1151..1025	620	99.2	Minus
chrU	10048995	chrU	3694040..3694165	1026..1151	615	99.2	Plus
chrX	22417052	chrX	3646849..3646974	1026..1151	615	99.2	Plus
chr2R	21145070	chr2R	6843052..6843177	1151..1026	615	99.2	Minus
chr3R	27901430	chr3R	6630131..6630252	1151..1030	610	100	Minus
chr3R	27901430	chr3R	834306..834427	1030..1151	610	100	Plus
chrU	10048995	chrU	1306540..1306661	1030..1151	610	100	Plus
chrU	10048995	chrU	3899590..3899711	1030..1151	610	100	Plus
chrU	10048995	chrU	7093570..7093691	1030..1151	610	100	Plus
chr3L	24539361	chr3L	10058886..10059007	1030..1151	610	100	Plus
chr3L	24539361	chr3L	23067955..23068076	1030..1151	610	100	Plus
chr3L	24539361	chr3L	24186397..24186527	1151..1021	610	97.7	Minus
chr3L	24539361	chr3L	24214124..24214254	1151..1021	610	97.7	Minus
chr2RHet	3288813	chr2RHet	1471310..1471431	1030..1151	610	100	Plus
chrU	10048995	chrU	7082006..7082132	1151..1025	605	98.4	Minus
chrU	10048995	chrU	9678211..9678337	1151..1025	605	98.4	Minus
chrU	10048995	chrU	7743353..7743474	1030..1151	595	99.2	Plus
chrU	10048995	chrU	7904199..7904320	1030..1151	595	99.2	Plus
chrU	10048995	chrU	7951872..7951993	1151..1030	595	99.2	Minus
chrU	10048995	chrU	8047366..8047487	1030..1151	595	99.2	Plus
chrU	10048995	chrU	9614851..9614972	1151..1030	595	99.2	Minus
chr3L	24539361	chr3L	1505949..1506070	1151..1030	595	99.2	Minus
chr3L	24539361	chr3L	11261759..11261880	1030..1151	595	99.2	Plus
chr2RHet	3288813	chr2RHet	854089..854210	1151..1030	595	99.2	Minus
chrX	22417052	chrX	3653839..3653960	1030..1151	595	99.2	Plus
chrX	22417052	chrX	14195114..14195235	1151..1030	595	99.2	Minus
chrX	22417052	chrX	21400423..21400544	1030..1151	595	99.2	Plus
chr3LHet	2555433	chr3LHet	1122038..1122159	1151..1030	595	99.2	Minus
chr2R	21145070	chr2R	1796475..1796596	1030..1151	595	99.2	Plus
chr2R	21145070	chr2R	5614493..5614614	1151..1030	595	99.2	Minus
chr2R	21145070	chr2R	6836070..6836191	1151..1030	595	99.2	Minus
chrU	10048995	chrU	8121463..8121581	1033..1151	580	99.2	Plus
chr3RHet	2517486	chr3RHet	160525..160646	1030..1151	580	98.4	Plus
chr3L	24539361	chr3L	23820568..23820689	1030..1151	580	98.4	Plus
chr3L	24539361	chr3L	24207138..24207259	1151..1030	580	98.4	Minus
chr3LHet	2555433	chr3LHet	1671999..1672119	1151..1025	495	94.5	Minus
chrU	10048995	chrU	9657682..9657768	1030..1116	435	100	Plus
chrX	22417052	chrX	15898119..15898226	528..635	240	81.5	Plus

Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:40:09 has no hits.

Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:06:07

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
3R	32079331	3R	10811580..10812215	1152..517	3180	100	Minus
3R	32079331	3R	10812798..10813006	518..310	1045	100	Minus
3R	32079331	3R	10813465..10813634	170..1	850	100	Minus
3R	32079331	3R	10813058..10813202	313..169	725	100	Minus
3R	32079331	3R	361357..361488	1152..1021	645	99.2	Minus
3R	32079331	3R	1280632..1280763	1152..1021	645	99.2	Minus
3R	32079331	3R	5002376..5002507	1021..1152	645	99.2	Plus
Ymm	880023	Ymm	499685..499816	1152..1021	645	99.2	Minus
3L	28110227	3L	10060158..10060289	1021..1152	645	99.2	Plus
3L	28110227	3L	20327770..20327901	1021..1152	645	99.2	Plus
3L	28110227	3L	23824840..23824971	1021..1152	645	99.2	Plus
2R	25286936	2R	108452..108583	1021..1152	645	99.2	Plus
2R	25286936	2R	119086..119217	1021..1152	645	99.2	Plus
2R	25286936	2R	2693652..2693783	1021..1152	645	99.2	Plus
2R	25286936	2R	3562298..3562429	1021..1152	645	99.2	Plus
3L	28110227	3L	23072276..23072403	1025..1152	640	100	Plus
2R	25286936	2R	1708982..1709109	1025..1152	640	100	Plus
U	3151297	U	1158969..1159096	1152..1025	640	100	Minus
U	3151297	U	2821770..2821897	1152..1025	640	100	Minus
3L	28110227	3L	25745184..25745315	1152..1021	630	98.5	Minus
3L	28110227	3L	27197934..27198065	1152..1021	630	98.5	Minus
2R	25286936	2R	5902204..5902335	1021..1152	630	98.5	Plus
Y	3667352	Y	3273780..3273911	1021..1152	630	98.5	Plus
X	23542271	X	14310168..14310299	1152..1021	630	98.5	Minus
3L	28110227	3L	1513471..1513598	1152..1025	625	99.2	Minus
3L	28110227	3L	11264514..11264641	1025..1152	625	99.2	Plus
2R	25286936	2R	2117941..2118068	1152..1025	625	99.2	Minus
2R	25286936	2R	9734040..9734167	1152..1025	625	99.2	Minus
3R	32079331	3R	350199..350322	1152..1029	620	100	Minus
3R	32079331	3R	346872..346995	1152..1029	620	100	Minus
2R	25286936	2R	1834894..1835020	1152..1026	620	99.2	Minus
2R	25286936	2R	10955454..10955580	1152..1026	620	99.2	Minus
X	23542271	X	3753471..3753597	1026..1152	620	99.2	Plus
3R	32079331	3R	339908..340030	1152..1030	615	100	Minus
3R	32079331	3R	5008625..5008747	1030..1152	615	100	Plus
3R	32079331	3R	10804617..10804739	1152..1030	615	100	Minus
Ymm	880023	Ymm	145683..145805	1030..1152	615	100	Plus
Ymm	880023	Ymm	351313..351435	1152..1030	615	100	Minus
Ymm	880023	Ymm	531596..531718	1030..1152	615	100	Plus
3L	28110227	3L	10067177..10067299	1030..1152	615	100	Plus
3L	28110227	3L	23079037..23079159	1030..1152	615	100	Plus
3L	28110227	3L	24197489..24197620	1152..1021	615	97.7	Minus
3L	28110227	3L	24225215..24225346	1152..1021	615	97.7	Minus
2R	25286936	2R	125977..126099	1030..1152	615	100	Plus
2R	25286936	2R	1715969..1716091	1030..1152	615	100	Plus
2R	25286936	2R	2700570..2700692	1030..1152	615	100	Plus
Y	3667352	Y	3280742..3280864	1030..1152	615	100	Plus
Y	3667352	Y	3551940..3552062	1152..1030	615	100	Minus
Ymm	880023	Ymm	512496..512623	1152..1025	610	98.4	Minus
U	3151297	U	1360392..1360519	1152..1025	610	98.4	Minus
Y	3667352	Y	864426..864553	1152..1025	610	98.4	Minus
Ymm	880023	Ymm	142687..142809	1030..1152	600	99.2	Plus
3L	28110227	3L	1506443..1506565	1152..1030	600	99.2	Minus
3L	28110227	3L	11270902..11271024	1030..1152	600	99.2	Plus
3L	28110227	3L	25739371..25739493	1152..1030	600	99.2	Minus
2R	25286936	2R	5909203..5909325	1030..1152	600	99.2	Plus
2R	25286936	2R	1827898..1828020	1152..1030	600	99.2	Minus
2R	25286936	2R	2110952..2111074	1152..1030	600	99.2	Minus
2R	25286936	2R	9727058..9727180	1152..1030	600	99.2	Minus
2R	25286936	2R	10948472..10948594	1152..1030	600	99.2	Minus
U	3151297	U	1175027..1175149	1030..1152	600	99.2	Plus
U	3151297	U	1242595..1242717	1152..1030	600	99.2	Minus
U	3151297	U	3002730..3002852	1030..1152	600	99.2	Plus
Y	3667352	Y	3558428..3558559	1152..1021	600	97	Minus
X	23542271	X	3760461..3760583	1030..1152	600	99.2	Plus
X	23542271	X	14304526..14304648	1152..1030	600	99.2	Minus
X	23542271	X	21535265..21535387	1030..1152	600	99.2	Plus
3R	32079331	3R	1273737..1273859	1152..1030	585	98.4	Minus
3L	28110227	3L	24218229..24218351	1152..1030	585	98.4	Minus
3L	28110227	3L	23831668..23831790	1030..1152	585	98.4	Plus
U	3151297	U	550420..550542	1030..1152	585	98.4	Plus
Xmm	1049845	Xmm	161542..161661	1033..1152	585	99.2	Plus
3L	28110227	3L	26324681..26324802	1152..1025	500	94.5	Minus
X	23542271	X	16008270..16008377	528..635	240	81.5	Plus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:55:04

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
3R	31820162	3R	10552411..10553046	1152..517	3180	100	Minus
3R	31820162	3R	10553629..10553837	518..310	1045	100	Minus
3R	31820162	3R	10554296..10554465	170..1	850	100	Minus
3R	31820162	3R	10553889..10554033	313..169	725	100	Minus
3R	31820162	3R	4743207..4743338	1021..1152	645	99.2	Plus
3R	31820162	3R	1078210..1078341	1152..1021	645	99.2	Minus
3R	31820162	3R	158935..159066	1152..1021	645	99.2	Minus
2R	25260384	2R	2693652..2693783	1021..1152	645	99.2	Plus
2R	25260384	2R	3563497..3563628	1021..1152	645	99.2	Plus
2R	25260384	2R	119086..119217	1021..1152	645	99.2	Plus
2R	25260384	2R	108452..108583	1021..1152	645	99.2	Plus
3L	28103327	3L	23817940..23818071	1021..1152	645	99.2	Plus
3L	28103327	3L	20320870..20321001	1021..1152	645	99.2	Plus
3L	28103327	3L	10053258..10053389	1021..1152	645	99.2	Plus
2R	25260384	2R	1708982..1709109	1025..1152	640	100	Plus
3L	28103327	3L	23065376..23065503	1025..1152	640	100	Plus
Unimproved_211000022228277_37_648	611	Unimproved_211000022228277_37_648	308..435	1152..1025	640	100	Minus
Unimproved_211000022215961_38_732	694	Unimproved_211000022215961_38_732	173..300	1152..1025	640	100	Minus
2R	25260384	2R	5903403..5903534	1021..1152	630	98.4	Plus
3L	28103327	3L	27191034..27191165	1152..1021	630	98.4	Minus
3L	28103327	3L	25738284..25738415	1152..1021	630	98.4	Minus
X	23527363	X	14318266..14318397	1152..1021	630	98.4	Minus
Unmapped_scaffold_16	28895	Unmapped_scaffold_16	18637..18768	1021..1152	630	98.4	Plus
2R	25260384	2R	9735239..9735366	1152..1025	625	99.2	Minus
2R	25260384	2R	2117941..2118068	1152..1025	625	99.2	Minus
3L	28103327	3L	11257614..11257741	1025..1152	625	99.2	Plus
3L	28103327	3L	1513471..1513598	1152..1025	625	99.2	Minus
3R	31820162	3R	147777..147900	1152..1029	620	100	Minus
3R	31820162	3R	144450..144573	1152..1029	620	100	Minus
2R	25260384	2R	10956653..10956779	1152..1026	620	99.2	Minus
2R	25260384	2R	1834894..1835020	1152..1026	620	99.2	Minus
X	23527363	X	3761569..3761695	1026..1152	620	99.2	Plus
3R	31820162	3R	4749456..4749578	1030..1152	615	100	Plus
3R	31820162	3R	10545448..10545570	1152..1030	615	100	Minus
3R	31820162	3R	137486..137608	1152..1030	615	100	Minus
2R	25260384	2R	2700570..2700692	1030..1152	615	100	Plus
2R	25260384	2R	1715969..1716091	1030..1152	615	100	Plus
2R	25260384	2R	125977..126099	1030..1152	615	100	Plus
3L	28103327	3L	23072137..23072259	1030..1152	615	100	Plus
3L	28103327	3L	10060277..10060399	1030..1152	615	100	Plus
3L	28103327	3L	24218315..24218446	1152..1021	615	97.7	Minus
3L	28103327	3L	24190589..24190720	1152..1021	615	97.7	Minus
Y	3410481	Y	3376846..3376968	1030..1152	615	100	Plus
Unmapped_scaffold_16	28895	Unmapped_scaffold_16	25599..25721	1030..1152	615	100	Plus
Unmapped_scaffold_12	66439	Unmapped_scaffold_12	5661..5783	1030..1152	615	100	Plus
Unmapped_scaffold_23	31460	Unmapped_scaffold_23	3115..3237	1152..1030	615	100	Minus
Y	3410481	Y	1560260..1560387	1152..1025	610	98.4	Minus
2R	25260384	2R	1827898..1828020	1152..1030	600	99.1	Minus
2R	25260384	2R	5910402..5910524	1030..1152	600	99.1	Plus
2R	25260384	2R	10949671..10949793	1152..1030	600	99.1	Minus
2R	25260384	2R	9728257..9728379	1152..1030	600	99.1	Minus
2R	25260384	2R	2110952..2111074	1152..1030	600	99.1	Minus
3L	28103327	3L	11264002..11264124	1030..1152	600	99.1	Plus
3L	28103327	3L	25732471..25732593	1152..1030	600	99.1	Minus
3L	28103327	3L	1506443..1506565	1152..1030	600	99.1	Minus
X	23527363	X	21520357..21520479	1030..1152	600	99.1	Plus
X	23527363	X	3768559..3768681	1030..1152	600	99.1	Plus
X	23527363	X	14312624..14312746	1152..1030	600	99.1	Minus
Y	3410481	Y	3370349..3370480	1021..1152	600	96.9	Plus
Unmapped_scaffold_12	66439	Unmapped_scaffold_12	2665..2787	1030..1152	600	99.1	Plus
3R	31820162	3R	1071315..1071437	1152..1030	585	98.3	Minus
3L	28103327	3L	23824768..23824890	1030..1152	585	98.3	Plus
3L	28103327	3L	24211329..24211451	1152..1030	585	98.3	Minus
3L	28103327	3L	26317808..26317902	1119..1025	475	100	Minus
X	23527363	X	16016368..16016475	528..635	240	81.4	Plus

Blast to na_te.dros performed 2019-03-15 14:06:08

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
17.6	7439	17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2).	392..512	1150..1030	596	99.2	Minus
17.6	7439	17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2).	7319..7439	1150..1030	596	99.2	Minus
McClintock	6450	McClintock McCLINTOCK 6450bp	429..496	1119..1052	160	70.6	Minus
McClintock	6450	McClintock McCLINTOCK 6450bp	6381..6448	1119..1052	160	70.6	Minus

RE19466.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:07:15 Download gff for RE19466.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chr3R	6637213..6637726	519..1032	99	<-	Minus
chr3R	6638311..6638517	312..518	100	<-	Minus
chr3R	6638573..6638713	171..311	100	<-	Minus
chr3R	6638981..6639150	1..170	100		Minus

Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:00:18 Download gff for RE19466.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG14693-RC	550..1410	33..893	99		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:39:47 Download gff for RE19466.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG14693-RC	550..1410	33..893	99		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:18:27 Download gff for RE19466.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG14693-RC	550..1410	33..893	99		Plus

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:09:37 Download gff for RE19466.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG14693-RA	82..942	33..893	99		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:50:19 Download gff for RE19466.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG14693-RC	550..1410	33..893	99		Plus

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:04:48 Download gff for RE19466.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG14693-RB	1..1151	1..1151	100		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:39:47 Download gff for RE19466.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG14693-RB	1..1151	1..1151	100		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:18:27 Download gff for RE19466.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG14693-RB	3..1153	1..1151	100		Plus

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:09:39 Download gff for RE19466.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG14693-RB	1..1151	1..1151	100		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:50:19 Download gff for RE19466.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG14693-RB	3..1153	1..1151	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:07:15 Download gff for RE19466.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	10813465..10813634	1..170	100		Minus
3R	10811581..10812213	519..1151	100	<-	Minus
3R	10812798..10813004	312..518	100	<-	Minus
3R	10813060..10813200	171..311	100	<-	Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:07:15 Download gff for RE19466.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	10813465..10813634	1..170	100		Minus
3R	10811581..10812213	519..1151	100	<-	Minus
3R	10812798..10813004	312..518	100	<-	Minus
3R	10813060..10813200	171..311	100	<-	Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:07:15 Download gff for RE19466.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	10813465..10813634	1..170	100		Minus
3R	10811581..10812213	519..1151	100	<-	Minus
3R	10812798..10813004	312..518	100	<-	Minus
3R	10813060..10813200	171..311	100	<-	Minus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:18:27 Download gff for RE19466.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_3R	6638782..6638922	171..311	100	<-	Minus
arm_3R	6638520..6638726	312..518	100	<-	Minus
arm_3R	6637303..6637935	519..1151	100	<-	Minus
arm_3R	6639187..6639356	1..170	100		Minus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:43:50 Download gff for RE19466.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	10552412..10553044	519..1151	100	<-	Minus
3R	10553629..10553835	312..518	100	<-	Minus
3R	10553891..10554031	171..311	100	<-	Minus
3R	10554296..10554465	1..170	100		Minus

RE19466.pep Sequence

Translation from 95 to 892

> RE19466.pep
MTKIWEEKKRALKALDYFDFLDDDQIVEACRYGRLKQFDPLDTIFCEDIG
SMTNVHFVLSGECLILQCLNIKVTMKRGKKVYDLLPASEGDVSKMFRKAV
RSTFSSQSTNEDQSKIDILDLVASTSSSSTGDAQKSALNRKTPTFESHFI
DVGTITFGGIFGLGEKMENRVIMARSTVQCLILPRFFLLEKKQNPGNVWE
RRLLYVGVMVPSREALFAHYRKACDWKKFKNDLISETLKPSDNDITHIED
VPIICRIVESPEDLN*

RE19466.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:20:08

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF17086-PA	260	GF17086-PA	1..260	1..265	779	57.3	Plus
Dana\GF20169-PA	497	GF20169-PA	322..455	121..257	363	48.6	Plus
Dana\GF19970-PA	121	GF19970-PA	7..117	145..257	310	50.9	Plus
Dana\GF20169-PA	497	GF20169-PA	94..229	1..141	298	42.6	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:20:08

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG17262-PA	469	GG17262-PA	205..469	1..265	1238	92.5	Plus
Dere\GG17942-PA	621	GG17942-PA	478..619	125..263	394	53.8	Plus
Dere\GG17940-PA	583	GG17940-PA	462..581	145..263	389	56.7	Plus
Dere\GG17940-PA	583	GG17940-PA	209..327	1..127	305	44.1	Plus
Dere\GG17942-PA	621	GG17942-PA	208..343	1..140	281	43.4	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:20:09

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH19563-PA	253	GH19563-PA	1..252	1..260	731	52.3	Plus
Dgri\GH12552-PA	572	GH12552-PA	435..572	127..264	426	52.9	Plus
Dgri\GH12552-PA	572	GH12552-PA	209..368	1..149	269	40.4	Plus
Dgri\GH11858-PA	592	GH11858-PA	467..585	141..260	267	48.3	Plus
Dgri\GH11858-PA	592	GH11858-PA	211..294	3..87	233	48.2	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:13:47

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
CG14693-PC	469	CG14693-PC	205..469	1..265	1376	100	Plus
CG14693-PB	265	CG14693-PB	1..265	1..265	1376	100	Plus
CG14693-PE	586	CG14693-PE	205..345	1..141	718	100	Plus
CG14693-PE	586	CG14693-PE	440..586	119..265	667	88.4	Plus
CG8958-PA	621	CG8958-PA	470..619	125..263	374	50.7	Plus
CG12698-PA	580	CG12698-PA	420..580	103..265	373	45.7	Plus
CG12698-PA	580	CG12698-PA	208..341	1..141	296	43.3	Plus
CG8958-PA	621	CG8958-PA	208..343	1..140	287	44.8	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:20:09

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI23858-PA	450	GI23858-PA	204..443	1..257	696	52.7	Plus
Dmoj\GI11206-PA	645	GI11206-PA	525..645	143..264	392	55.7	Plus
Dmoj\GI10916-PA	607	GI10916-PA	473..599	135..262	335	45.3	Plus
Dmoj\GI11206-PA	645	GI11206-PA	209..356	1..141	267	40.1	Plus
Dmoj\GI10916-PA	607	GI10916-PA	210..303	3..92	251	48.9	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:20:10

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL21928-PA	266	GL21928-PA	2..258	3..263	696	51.1	Plus
Dper\GL15910-PA	434	GL15910-PA	209..432	1..262	565	43	Plus
Dper\GL15820-PA	345	GL15820-PA	224..341	144..260	406	61.9	Plus
Dper\GL26512-PA	201	GL26512-PA	52..194	87..225	291	43.8	Plus
Dper\GL13289-PA	197	GL13289-PA	2..88	32..123	206	41.3	Plus
Dper\GL15820-PA	345	GL15820-PA	2..88	32..123	205	41.3	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:20:11

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA21434-PA	613	GA21434-PA	477..611	127..262	416	57.7	Plus
Dpse\GA25580-PA	130	GA25580-PA	4..122	145..263	395	58	Plus
Dpse\GA11761-PA	577	GA11761-PA	422..575	110..262	374	46.1	Plus
Dpse\GA21434-PA	613	GA21434-PA	208..337	1..134	335	48.1	Plus
Dpse\GA11761-PA	577	GA11761-PA	209..292	1..84	271	52.4	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:20:11

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM26146-PA	585	GM26146-PA	466..585	146..265	644	97.5	Plus
Dsec\GM26146-PA	585	GM26146-PA	205..343	1..141	616	94.3	Plus
Dsec\GM12985-PA	624	GM12985-PA	504..622	146..263	388	57.1	Plus
Dsec\GM11681-PA	585	GM11681-PA	415..585	91..265	378	43.8	Plus
Dsec\GM11681-PA	585	GM11681-PA	208..294	1..87	307	60.9	Plus
Dsec\GM12985-PA	624	GM12985-PA	208..343	1..140	284	44.8	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:20:12

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD20699-PA	585	GD20699-PA	205..343	1..141	694	95	Plus
Dsim\GD20699-PA	585	GD20699-PA	462..585	142..265	663	96.8	Plus
Dsim\GD24827-PA	622	GD24827-PA	502..620	146..263	388	57.1	Plus
Dsim\GD24826-PA	683	GD24826-PA	513..683	91..265	379	43.2	Plus
Dsim\GD24826-PA	683	GD24826-PA	306..392	1..87	303	59.8	Plus
Dsim\GD24827-PA	622	GD24827-PA	208..343	1..140	284	44.8	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:20:13

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ10572-PA	405	GJ10572-PA	277..403	136..262	437	61.4	Plus
Dvir\GJ18495-PA	641	GJ18495-PA	521..641	143..264	390	55.7	Plus
Dvir\GJ18562-PA	595	GJ18562-PA	461..569	135..247	283	42.5	Plus
Dvir\GJ18495-PA	641	GJ18495-PA	209..359	1..141	270	40.8	Plus
Dvir\GJ10572-PA	405	GJ10572-PA	211..282	1..72	267	66.7	Plus
Dvir\GJ18562-PA	595	GJ18562-PA	209..297	3..91	254	50.6	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:20:13

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK13387-PA	463	GK13387-PA	205..462	1..263	776	56.6	Plus
Dwil\GK25221-PA	279	GK25221-PA	107..279	82..264	403	42.9	Plus
Dwil\GK24973-PA	646	GK24973-PA	516..646	134..263	366	51.1	Plus
Dwil\GK24973-PA	646	GK24973-PA	210..358	1..142	305	40	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:20:14

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE24663-PA	468	GE24663-PA	205..468	1..265	1281	92.1	Plus
Dyak\GE17246-PA	585	GE17246-PA	444..583	125..263	394	51.4	Plus
Dyak\GE17249-PA	617	GE17249-PA	487..615	135..263	390	55.4	Plus
Dyak\GE17246-PA	585	GE17246-PA	209..338	1..141	298	41.8	Plus
Dyak\GE17249-PA	617	GE17249-PA	208..343	1..140	279	43.4	Plus

RE19466.hyp Sequence

Translation from 95 to 892

> RE19466.hyp
MTKIWEEKKRALKALDYFDFLDDDQIVEACRYGRLKQFDPLDTIFCEDIG
SMTNVHFVLSGECLILQCLNIKVTMKRGKKVYDLLPASEGDVSKMFRKAV
RSTFSSQSTNEDQSKIDILDLVASTSSSSTGDAQKSALNRKTPTFESHFI
DVGTITFGGIFGLGEKMENRVIMARSTVQCLILPRFFLLEKKQNPGNVWE
RRLLYVGVMVPSREALFAHYRKACDWKKFKNDLISETLKPSDNDITHIED
VPIICRIVESPEDLN*

RE19466.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:03:26

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
CG14693-PB	265	CG14693-PB	1..265	1..265	1376	100	Plus
CG14693-PC	469	CG14693-PC	205..469	1..265	1376	100	Plus
CG14693-PE	586	CG14693-PE	205..345	1..141	718	100	Plus
CG14693-PE	586	CG14693-PE	440..586	119..265	667	88.4	Plus
CG8958-PA	621	CG8958-PA	470..619	125..263	374	50.7	Plus
CG12698-PA	580	CG12698-PA	420..580	103..265	373	45.7	Plus
CG8958-PA	621	CG8958-PA	208..343	1..140	287	44.8	Plus

Library:	RE
Tissue Source:	Drosophila melanogaster embryo
Created by:	Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:	2000-10-23
Comments:	Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:	194
Well:	66
Vector:	pFlc-1
Associated Gene/Transcript	CG14693-RB
Protein status:	RE19466.pep: gold
Preliminary Size:	942
Sequenced Size:	1167

Clone RE19466 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

RE19466.complete Sequence

RE19466.complete Blast Records

RE19466.complete Sim4 Records

RE19466.pep Sequence

RE19466.pep Blast Records

RE19466.hyp Sequence

RE19466.hyp Blast Records