Clone RE19835 Report

Search the DGRC for RE19835

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:198
Well:35
Vector:pFlc-1
Associated Gene/TranscriptCG5800-RA
Protein status:RE19835.pep: gold
Preliminary Size:2562
Sequenced Size:2655

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5800 2002-01-01 Sim4 clustering to Release 2
CG5800 2002-06-07 Blastp of sequenced clone
CG5800 2003-01-01 Sim4 clustering to Release 3
CG5800 2008-04-29 Release 5.5 accounting
CG5800 2008-08-15 Release 5.9 accounting
CG5800 2008-12-18 5.12 accounting

Clone Sequence Records

RE19835.complete Sequence

2655 bp (2655 high quality bases) assembled on 2002-06-07

GenBank Submission: AY119628

> RE19835.complete
GTTTCTTCTCTCATCCCTAATTCCAACCGCGTGCGAATTTCAATACGTTT
CGAAACGACCGCATTTTGGTCAATAAACAGAGGGTATGCAGCGCCAGAAA
CCCAAGGGACCCGGCAAACCGGGTTCGCGCTTCAAGCCGGGATCCGGCAC
GTTCAAAGGAGCTGGTGGTGGCCGGAAAAGCGGCGACAACAGCCAGAAGC
GTCCGCGCCAGGAGATCAACAAGTCGCGACTGGCCGCCACCGAAGCGGAG
ATCCAGGACCTCAAGACCAAATACGCAGAGATCGATGCTACTGCCATTAA
GAAGTTCGCCCAGTTTCCGCTGTCCAAGAAGACCCAAAAGGCACTGGCGG
AGTCCAAATTCGTGCATCCCACGCAGGTGCAGCGGGACAGCATTGGACCC
GCACTGCAGGGCAAGGATGTGCTGGGCGCGGCCATCACAGGCAGTGGCAA
GACACTGGCCTTTCTCATACCCGTTCTGGAGCATCTGTTCATGAACAAAT
GGTCGCGCACCGATGGCGTTGGCGCTATCATCATCTCGCCCACCCGCGAG
CTAGCCTACCAGATCTTCGAGACCCTAAAGAAGGTGGGAAAGCACCACGA
CTTCTCCGCCGGCCTCATCATCGGAGGCAAGAACCTGAAGTTCGAGCGCA
CTCGCATGGACCAGTGCAACATACTGATCTGCACACCCGGAAGGCTGCTG
CAGCACATGGACGAGAATCCTCTCTTTAATACGAGCACCATGGAGATGTT
GGTCCTGGATGAAGCCGATCGCTGTTTGGATATGGGTTTCCAGAAGACCC
TGAATTCAATCATAGAAAATTTCCCACCAGTGCGTCAAACGCTGCTATTC
TCGGCCACGCAAACGAATACGGTGCAGGATTTGGCGAGGCTTAATCTAAA
GGATCCGGTCTACGTAGGCTACGGAGGAGCGACGCCAAGAGAAGAGCCCA
GCGCCAGCACGAAGAAGACTCCGAACACAGCTGTCTTGGCAGTTCCTGAG
CTTTTGCAGCAGAGTTATGTGGTGTTGAACCTGGAGGACAAGATCACCAT
GCTGTGGTCGTTCATCAAGAACCATTTGAAGCAGAAGATCATTGTGTTCG
TGGCCAGTTGCAAGCAGGCCAAGTACCTGTACGAGATATTTTGTAAACTG
CGGCCGGGTAGCCCGCTGCTGGCTCTCTATGGAACGCTCCATCAGGATCG
TCGCATTGCCATCTACGAGGATTTCCTTCGCAAGAGCCACGTCGTTATGT
TCTCCACTGATGTGGCATCGCGCGGTCTGGACTTTCCTGCCGTCAATTGG
GTGGTGCAGTTGGACTGCCCGGAGGATGTTTCACAGTACATTCATCGAGC
TGGACGATCTGCGCGGAACAAGACACGCGGCGAGTGTCTGTTGGTTTTGA
CACCCAGCGAGGAGGAGTACATGATTAGTGCGCTTAAGGAACAGTTGAAT
ATCGACATTCGTTGTGTGCAAATCGATCCCAAGAAGCTCTTCTCTCCGCG
CGTCAAGATCGAGGCCTTTCTGGCCCAATTTCCCGAACTGAGGGCAACCG
CCCAGCGCGCCTTCCTCTCCTACATAAAATCCGTATTCCTGATGCGCAAC
AAGCGCTTGTTTAATGTGTTCAGCCTGGATCTAGATGCATTTGCCCAATC
GCTCGGCTTGGCGGTTACGCCGCGTGTTCCCTTCCTCGAAAAATTCCTGT
GGCGCCAGAAGCAGCTACAGCAGCAGAAAGAACAGGGTGATAACGCAAAA
TCGATCAATCCATTGCTCAGCAAGCTGACCAAGCAGCAGAGCTTTGGCGG
CGGTGACGAGGATGAAGAGAACAGTGATGACGAAGACTTTATCAAGGTGA
AACGTAAGGATCACGATGTGGAAGGAGAGCCAGTGAAGCTGGACGAAGAG
GATGACACTGAGAATGAGGCAGAGGCCCCACTTGTGGTACCCAAGCGCGA
GAAGCTGGTAACCAAGGCCTCGCTGGCCAAGAAGGCGCTGAAGAAGAATC
TGCAGGTCAACTCCAAGCTGAAGTTCGATGACGAGGGCGAAACTATGGCA
GATGATCGCAGCCAAATGAAGGCCTTGAGTGCCAGGCAAAGAACAGTGAA
CCAAGACGACGACGATGGAGGCATTAATCTAGTGCTGTCCAAGGCGCTAC
TCACCGAGGAGGATCAATATGACAAGCAGCGATTCCGGGAGCTGGTCAAG
AAGCGCCACAAACTGCAGCGCGAGAAGCTGCGGAAAAAGGCGGAGGAGGC
CAAGGGCAGCGACGACGAAGAGGAGCAACAGGACGATGACAATGCGGACG
ATGCTGGCAGTGAGAGTGACCATTCAGTGGACCTCTCCTGGCTGCCGGAT
CCCGATAAGGTTTACAAAAATAAGCCTAACGCTTCGGATCGAAATGAATC
CAAATCAGAGTCCAGCGATGCATCCGATGACGAGAAAGCTGACGACAGCG
ACGGCGACGACGACGACGTCTCCGACGATGAACCCGCCTACAAAAAGTCC
AAGCTGACGAACAAGATGACTCTAATGGACACGGAGGCCATAGCGGCCAG
TCTTTTGGGTAGCTAAGTGGGGGAATAAATTAATGCCAACTACTTTGTAA
AAATAACCGTGTAGCTTAATAGAAGTTTGTTTTTATGGATACTTCAAAAA
AAAAA

RE19835.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:51:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG5800-RA 2809 CG5800-RA 38..2684 1..2647 13205 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:38:43
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 17526157..17528329 473..2645 10835 99.9 Plus
chrX 22417052 chrX 17525609..17526082 1..474 2355 99.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:40:24 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:38:41
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17636831..17639005 473..2647 10860 100 Plus
X 23542271 X 17636283..17636756 1..474 2355 99.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:23:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 17644929..17647103 473..2647 10860 99.9 Plus
X 23527363 X 17644381..17644854 1..474 2355 99.7 Plus
Blast to na_te.dros performed 2019-03-16 22:38:42
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 1038..1161 146..263 136 62.4 Plus

RE19835.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:39:35 Download gff for RE19835.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 17525609..17526080 1..472 99 -> Plus
chrX 17526157..17528329 473..2645 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:00:33 Download gff for RE19835.complete
Subject Subject Range Query Range Percent Splice Strand
CG5800-RA 1..2481 86..2566 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:27:31 Download gff for RE19835.complete
Subject Subject Range Query Range Percent Splice Strand
CG5800-RA 1..2481 86..2566 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:15:41 Download gff for RE19835.complete
Subject Subject Range Query Range Percent Splice Strand
CG5800-RA 1..2481 86..2566 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:18:01 Download gff for RE19835.complete
Subject Subject Range Query Range Percent Splice Strand
CG5800-RA 1..2481 86..2566 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:41:05 Download gff for RE19835.complete
Subject Subject Range Query Range Percent Splice Strand
CG5800-RA 1..2481 86..2566 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:56:10 Download gff for RE19835.complete
Subject Subject Range Query Range Percent Splice Strand
CG5800-RA 1..2645 1..2645 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:27:31 Download gff for RE19835.complete
Subject Subject Range Query Range Percent Splice Strand
CG5800-RA 1..2645 1..2645 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:15:41 Download gff for RE19835.complete
Subject Subject Range Query Range Percent Splice Strand
CG5800-RA 3..2647 1..2645 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:18:01 Download gff for RE19835.complete
Subject Subject Range Query Range Percent Splice Strand
CG5800-RA 1..2645 1..2645 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:41:05 Download gff for RE19835.complete
Subject Subject Range Query Range Percent Splice Strand
CG5800-RA 3..2647 1..2645 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:39:35 Download gff for RE19835.complete
Subject Subject Range Query Range Percent Splice Strand
X 17636283..17636754 1..472 99 -> Plus
X 17636831..17639003 473..2645 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:39:35 Download gff for RE19835.complete
Subject Subject Range Query Range Percent Splice Strand
X 17636283..17636754 1..472 99 -> Plus
X 17636831..17639003 473..2645 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:39:35 Download gff for RE19835.complete
Subject Subject Range Query Range Percent Splice Strand
X 17636283..17636754 1..472 99 -> Plus
X 17636831..17639003 473..2645 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:15:41 Download gff for RE19835.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17530316..17530787 1..472 99 -> Plus
arm_X 17530864..17533036 473..2645 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:51:22 Download gff for RE19835.complete
Subject Subject Range Query Range Percent Splice Strand
X 17644381..17644852 1..472 99 -> Plus
X 17644929..17647101 473..2645 99   Plus

RE19835.pep Sequence

Translation from 85 to 2565

> RE19835.pep
MQRQKPKGPGKPGSRFKPGSGTFKGAGGGRKSGDNSQKRPRQEINKSRLA
ATEAEIQDLKTKYAEIDATAIKKFAQFPLSKKTQKALAESKFVHPTQVQR
DSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDGVGAIII
SPTRELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRMDQCNILICT
PGRLLQHMDENPLFNTSTMEMLVLDEADRCLDMGFQKTLNSIIENFPPVR
QTLLFSATQTNTVQDLARLNLKDPVYVGYGGATPREEPSASTKKTPNTAV
LAVPELLQQSYVVLNLEDKITMLWSFIKNHLKQKIIVFVASCKQAKYLYE
IFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDF
PAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMISAL
KEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFPELRATAQRAFLSYIKSV
FLMRNKRLFNVFSLDLDAFAQSLGLAVTPRVPFLEKFLWRQKQLQQQKEQ
GDNAKSINPLLSKLTKQQSFGGGDEDEENSDDEDFIKVKRKDHDVEGEPV
KLDEEDDTENEAEAPLVVPKREKLVTKASLAKKALKKNLQVNSKLKFDDE
GETMADDRSQMKALSARQRTVNQDDDDGGINLVLSKALLTEEDQYDKQRF
RELVKKRHKLQREKLRKKAEEAKGSDDEEEQQDDDNADDAGSESDHSVDL
SWLPDPDKVYKNKPNASDRNESKSESSDASDDEKADDSDGDDDDVSDDEP
AYKKSKLTNKMTLMDTEAIAASLLGS*

RE19835.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:31:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19542-PA 841 GF19542-PA 1..841 1..826 3238 79.5 Plus
Dana\GF18065-PA 678 GF18065-PA 192..627 79..531 797 38.2 Plus
Dana\GF16207-PA 607 GF16207-PA 13..473 78..537 631 35 Plus
Dana\GF22616-PA 921 GF22616-PA 293..806 96..529 567 30.9 Plus
Dana\GF14739-PA 525 GF14739-PA 84..415 85..439 531 35.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:32:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19124-PA 827 GG19124-PA 1..827 1..826 3905 93 Plus
Dere\GG11103-PA 683 GG11103-PA 197..632 79..531 803 38.2 Plus
Dere\GG17465-PA 613 GG17465-PA 13..477 78..537 620 34.9 Plus
Dere\GG18185-PA 978 GG18185-PA 276..868 40..529 553 28.7 Plus
Dere\GG21281-PA 524 GG21281-PA 76..413 79..439 537 35.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:32:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24149-PA 798 GH24149-PA 1..796 1..826 2942 72.2 Plus
Dgri\GH20986-PA 689 GH20986-PA 204..639 79..531 804 38.2 Plus
Dgri\GH14140-PA 621 GH14140-PA 13..479 78..537 619 35.2 Plus
Dgri\GH13670-PA 518 GH13670-PA 64..401 79..439 538 35.4 Plus
Dgri\GH24071-PA 925 GH24071-PA 280..813 96..529 519 30.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:04:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG5800-PA 826 CG5800-PA 1..826 1..826 4229 100 Plus
pit-PC 680 CG6375-PC 194..629 79..531 774 38.2 Plus
pit-PA 680 CG6375-PA 194..629 79..531 774 38.2 Plus
pit-PB 680 CG6375-PB 194..629 79..531 774 38.2 Plus
CG9630-PA 613 CG9630-PA 13..477 78..537 597 34.8 Plus
CG8611-PA 974 CG8611-PA 269..864 37..529 537 29 Plus
CG8611-PB 975 CG8611-PB 270..865 37..529 537 29 Plus
CG9253-PA 507 CG9253-PA 23..410 36..444 532 33.7 Plus
CG8611-PC 828 CG8611-PC 270..776 37..456 509 29.8 Plus
Rs1-PB 782 CG2173-PB 115..520 34..451 491 31.5 Plus
Rs1-PA 782 CG2173-PA 115..520 34..451 491 31.5 Plus
CG6227-PA 1224 CG6227-PA 509..868 71..445 471 33.3 Plus
CG6418-PB 791 CG6418-PB 268..625 71..445 449 31.2 Plus
abs-PA 619 CG14637-PA 143..548 38..454 445 30.5 Plus
bel-PA 798 CG9748-PA 203..652 4..427 432 29.7 Plus
bel-PB 801 CG9748-PB 203..652 4..427 432 29.7 Plus
CG32344-PA 827 CG32344-PA 41..394 74..447 428 29.2 Plus
Rm62-PH 575 CG10279-PH 62..507 13..452 417 28.3 Plus
Rm62-PD 575 CG10279-PD 62..507 13..452 417 28.3 Plus
Rm62-PI 578 CG10279-PI 65..510 13..452 417 28.3 Plus
Rm62-PF 578 CG10279-PF 65..510 13..452 417 28.3 Plus
Rm62-PE 578 CG10279-PE 65..510 13..452 417 28.3 Plus
Rm62-PB 578 CG10279-PB 65..510 13..452 417 28.3 Plus
Rm62-PC 578 CG10279-PC 65..510 13..452 417 28.3 Plus
Rm62-PA 719 CG10279-PA 206..651 13..452 417 28.3 Plus
CG10077-PD 818 CG10077-PD 78..511 8..441 417 28.4 Plus
CG10077-PA 818 CG10077-PA 78..511 8..441 417 28.4 Plus
mahe-PC 945 CG10777-PC 204..612 44..452 407 30.4 Plus
mahe-PB 945 CG10777-PB 204..612 44..452 407 30.4 Plus
vas-PC 661 CG46283-PC 262..605 89..450 395 31.4 Plus
vas-PB 661 CG46283-PB 262..605 89..450 395 31.4 Plus
vas-PA 661 CG46283-PA 262..605 89..450 395 31.4 Plus
CG7878-PA 703 CG7878-PA 288..634 74..439 394 31.5 Plus
me31B-PB 428 CG4916-PB 12..396 57..465 390 29.1 Plus
me31B-PA 459 CG4916-PA 43..427 57..465 390 29.1 Plus
CG10333-PA 822 CG10333-PA 414..797 92..473 387 30.6 Plus
Gem3-PB 1028 CG6539-PB 24..392 71..454 384 28.2 Plus
Gem3-PA 1028 CG6539-PA 24..392 71..454 384 28.2 Plus
Dbp45A-PA 521 CG12759-PA 31..383 96..466 379 27.9 Plus
Hlc-PB 560 CG1666-PB 10..401 73..452 358 28.9 Plus
Hlc-PA 560 CG1666-PA 10..401 73..452 358 28.9 Plus
CG5589-PA 594 CG5589-PA 124..474 77..442 352 30.6 Plus
Hel25E-PB 424 CG7269-PB 25..408 53..458 351 24.9 Plus
Hel25E-PA 424 CG7269-PA 25..408 53..458 351 24.9 Plus
Hel25E-PC 424 CG7269-PC 25..408 53..458 351 24.9 Plus
CG7483-PA 399 CG7483-PA 1..363 49..432 350 27.6 Plus
CG10077-PC 472 CG10077-PC 78..468 8..398 344 28 Plus
eIF4A-PF 403 CG9075-PF 50..381 92..446 338 27.5 Plus
eIF4A-PE 403 CG9075-PE 50..381 92..446 338 27.5 Plus
eIF4A-PD 403 CG9075-PD 50..381 92..446 338 27.5 Plus
eIF4A-PB 403 CG9075-PB 50..381 92..446 338 27.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:32:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21709-PA 804 GI21709-PA 1..804 1..826 2997 74.6 Plus
Dmoj\GI10456-PA 748 GI10456-PA 261..696 79..531 814 38.2 Plus
Dmoj\GI10673-PA 610 GI10673-PA 13..474 78..537 640 35.3 Plus
Dmoj\GI21075-PA 515 GI21075-PA 58..403 71..439 535 34.1 Plus
Dmoj\GI14650-PA 893 GI14650-PA 278..792 96..529 530 32.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:32:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15986-PA 838 GL15986-PA 1..838 1..826 3248 78.1 Plus
Dper\GL24012-PA 884 GL24012-PA 230..562 79..427 708 40.5 Plus
Dper\GL24181-PA 609 GL24181-PA 31..474 96..537 627 36 Plus
Dper\GL19832-PA 917 GL19832-PA 285..804 96..529 540 30.1 Plus
Dper\GL25891-PA 518 GL25891-PA 82..413 85..439 537 35.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:32:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19139-PA 838 GA19139-PA 1..838 1..826 3239 77.8 Plus
Dpse\GA26479-PA 716 GA26479-PA 230..665 79..531 803 38 Plus
Dpse\GA21925-PA 609 GA21925-PA 31..474 96..537 627 36 Plus
Dpse\GA27288-PA 917 GA27288-PA 285..804 96..529 540 30.1 Plus
Dpse\GA21647-PA 518 GA21647-PA 82..413 85..439 537 35.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:32:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13518-PA 825 GM13518-PA 1..825 1..826 4255 97 Plus
Dsec\GM26397-PA 680 GM26397-PA 194..629 79..531 806 38.2 Plus
Dsec\GM26359-PA 613 GM26359-PA 13..477 78..537 629 34.7 Plus
Dsec\GM13317-PA 972 GM13317-PA 349..862 96..529 556 30.5 Plus
Dsec\GM23393-PA 519 GM23393-PA 72..409 79..439 542 35.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:32:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15676-PA 825 GD15676-PA 1..824 1..825 4251 97 Plus
Dsim\pit-PA 918 GD20918-PA 194..549 79..449 723 39.3 Plus
Dsim\GD20881-PA 613 GD20881-PA 13..477 78..537 621 34.7 Plus
Dsim\GD24302-PA 519 GD24302-PA 72..409 79..439 543 35.4 Plus
Dsim\GD10546-PA 782 GD10546-PA 156..496 71..427 508 33.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:32:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15570-PA 806 GJ15570-PA 21..806 26..826 2930 73.5 Plus
Dvir\GJ15571-PA 531 GJ15571-PA 21..531 26..531 2309 83.4 Plus
Dvir\GJ23143-PA 670 GJ23143-PA 185..620 79..531 816 38.4 Plus
Dvir\GJ23025-PA 610 GJ23025-PA 13..474 78..537 642 35.1 Plus
Dvir\GJ16136-PA 523 GJ16136-PA 77..408 85..439 535 35.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:32:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16405-PA 846 GK16405-PA 1..846 1..826 2990 73.5 Plus
Dwil\GK14240-PA 663 GK14240-PA 179..614 79..531 798 38 Plus
Dwil\GK11359-PA 613 GK11359-PA 13..481 78..537 607 34.1 Plus
Dwil\GK19923-PA 917 GK19923-PA 286..797 96..529 553 30.5 Plus
Dwil\GK21047-PA 507 GK21047-PA 62..399 79..439 535 35.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:32:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17675-PA 823 GE17675-PA 1..823 1..826 3794 91.8 Plus
Dyak\GE10265-PA 681 GE10265-PA 195..630 79..531 802 38.2 Plus
Dyak\GE24865-PA 615 GE24865-PA 13..479 78..537 615 35.1 Plus
Dyak\GE15594-PA 970 GE15594-PA 343..856 96..529 554 30.7 Plus
Dyak\GE12898-PA 522 GE12898-PA 75..412 79..439 547 35.6 Plus

RE19835.hyp Sequence

Translation from 85 to 2565

> RE19835.hyp
MQRQKPKGPGKPGSRFKPGSGTFKGAGGGRKSGDNSQKRPRQEINKSRLA
ATEAEIQDLKTKYAEIDATAIKKFAQFPLSKKTQKALAESKFVHPTQVQR
DSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDGVGAIII
SPTRELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRMDQCNILICT
PGRLLQHMDENPLFNTSTMEMLVLDEADRCLDMGFQKTLNSIIENFPPVR
QTLLFSATQTNTVQDLARLNLKDPVYVGYGGATPREEPSASTKKTPNTAV
LAVPELLQQSYVVLNLEDKITMLWSFIKNHLKQKIIVFVASCKQAKYLYE
IFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDF
PAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMISAL
KEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFPELRATAQRAFLSYIKSV
FLMRNKRLFNVFSLDLDAFAQSLGLAVTPRVPFLEKFLWRQKQLQQQKEQ
GDNAKSINPLLSKLTKQQSFGGGDEDEENSDDEDFIKVKRKDHDVEGEPV
KLDEEDDTENEAEAPLVVPKREKLVTKASLAKKALKKNLQVNSKLKFDDE
GETMADDRSQMKALSARQRTVNQDDDDGGINLVLSKALLTEEDQYDKQRF
RELVKKRHKLQREKLRKKAEEAKGSDDEEEQQDDDNADDAGSESDHSVDL
SWLPDPDKVYKNKPNASDRNESKSESSDASDDEKADDSDGDDDDVSDDEP
AYKKSKLTNKMTLMDTEAIAASLLGS*

RE19835.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:20:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG5800-PA 826 CG5800-PA 1..826 1..826 4229 100 Plus
pit-PC 680 CG6375-PC 194..629 79..531 774 38.2 Plus
pit-PA 680 CG6375-PA 194..629 79..531 774 38.2 Plus
pit-PB 680 CG6375-PB 194..629 79..531 774 38.2 Plus
CG9630-PA 613 CG9630-PA 13..477 78..537 597 34.8 Plus