Clone RE19838 Report

Search the DGRC for RE19838

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:198
Well:38
Vector:pFlc-1
Associated Gene/TranscriptCG5756-RB
Protein status:RE19838.pep: gold
Preliminary Size:3644
Sequenced Size:2679

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5756 2002-01-01 Sim4 clustering to Release 2
CG5756 2002-02-22 Blastp of sequenced clone
CG5756 2003-01-01 Sim4 clustering to Release 3
CG5756 2008-04-29 Release 5.5 accounting
CG5756 2008-08-15 Release 5.9 accounting
CG5756 2008-12-18 5.12 accounting

Clone Sequence Records

RE19838.complete Sequence

2679 bp (2679 high quality bases) assembled on 2002-02-22

GenBank Submission: AY089604

> RE19838.complete
CAGTTCAAGTTCGCGGCTCGAACGGTTCAGTTTGCCTGGTTTTTCCGCTC
CGCAAGCCGGTATCGAATTGAGTGAGAACAAGGATAATCCCAACCGACTG
GCAGGATAATGCTCCAGTGTCTGTGAAGTTATTAACCCAAAGTTGTTTAG
TGCTACAAAACAAAAGCAAAATTAAACAAAAACAAAAACCGAAACCAAAT
TAATATTCGGTACATTTTATTCGCTTATTCGGAGATTAAAAAGCATGTGG
CCACCCAGCTCCTGTCTGTGGTTGGCTCTCGCCCTCCTGGTGGGCGTGGC
CCAGGCCCAGAGCGGCAGTCGAGAGCACTTCGAGGATGCGGACAAGTCCA
GCGAGTATACGGATCAGCAGTTCGATCTACGGCACACGATTCCCGGAGAA
CCGGGCCTAGACTATCCCATTCTAAGTTCGCCGCCAAGGACCAGCTTTGT
GTGCAAGGGAAGACATGAAGGTTATTACGCGGATGTAGAAAGTCGCTGCC
AGGCCTTCCGCATTTGTGCCCATACCGCCCGATCACCCCAAGGATTCGGT
TTCCTCTGCCCCAACGGAACGCTCTTCAGCCAGAAGAACTTTGTGTGCGA
TTGGTACCGCAATGTGAACTGCGATGATTCTGAAAAGTATTATGAAATGA
ACGAGGAGAAAACCGTTGGCAGCACCCACGAAATGATGGAGCGAGTGCGT
CACATGATGGAATACCCCATGAAAACAATTTCAAAGGCCTTGCAACAAAC
CCAATCCCAGTCACAGAATCCACACCATAGTCTTAGCAAGGATCTAAGCG
GAGCTAGTGGTGTTTTGAGTCAACCTGCGGCCATTAAGCTCAATGATCCT
GAAACCCAAGTTGTTGGACGCGGAGAAGACGTGAAAAGTGAGCCATTGAG
TGCAGTACAACTAGGAAGCATTAACCCCGGGGACAGCGAAGATGAGGGTA
TTTATGTGAATAGTTTGGGAGAACTTTCTTCAGATCCAGGCATTCAGTTT
GATCACACCAATGCCCATATCGTGGCAGAATATCCCAGGGAGTACCACTA
CCAGAAGCAGAAGAACTTTGCCGAGCGTGTTAACGCGGGCTTGGATATCC
TAACTGACTCGGAATCCAACTCCGGTGAGGCTATGGCACCCGATTACATC
AAGCATATAAGAAATACTAAGGACGAGGCCGTACAACTAGATCTGGTATC
GAATATAAACAATCTGCTGGATGAAGTATCCACTGATGTGGATCCCTCCA
TTTCCGGCTATCAATCTATGGCACCGCCGAAAGTTAAGCAACCTTTCCGA
TTCCTAAGTCGTGGATTCTCCATGCAGCGTGAAAACGGAAAGGGTAGCTC
ATCTTCCGGTTATGGCTACATTAAACCCAAACAAACGCCCAGCACTGTCA
GATTTACGAATTTTAAGAGTGCCCAGTCGCAGGGTTCCAATCAAGCGCAG
CAAAACCAGCGCCAGCAGCAGCAGCAGCATCAAGTGGCCAAGCAGCAACA
TCACTCGGTTAGCAGCAGCTATGTGAAGCCAGCAGCAGCGCCAGCTATTT
CCAGTCTGACTGTACCACAACGACCCCAACAAACATCGCAGTCATCTGTG
CCGCCAGGAATTGTGATTGCTCGAGCTGAGGGCCAGCGTATTGCTCCCAA
CTCCGCCAGCAGCATCATTTCCAGCTTGGCCACTCAAGCACCAGTGACCA
GCAACCAGGGCAACTCCTATGTCTCCCTCAACGATTTCCTTAACAACAAA
TTTGGTCAGAGTCCTGCAGCCAGCAGTAATGTTCATTCTGCTGCCACTTT
GCAGCAGGAACAACAGCCACATTATCAGCAGCAAGCCACTCTGTCCTTGC
AGCAGCAACAGCAACAGCAACGGCAACCTGTGCTGCAGCAGCAACATCAG
CTCGTGCAACAGCAACGCCAGCCTGTGCAGCAGCAATTGAGCTTTATCTC
GCAGCAATACCAGCAGCCGCAGCAGCAGAGTATCTACCAGCAATATAAAC
AGCCACAACAGCAACAGCAGCAGCAACACTTCCAGCAGCAGCAACAGCGG
ACGACGATCCACACCAATCAGCAACCCTATCTTACGCCCAATATCTTTGT
GCCCTACCATCAGCAGCAGCAACAGTTGCCCCAGTTCCCGCCGTTGGCTC
CACCCGTGTCGATATCCACGGGAAATATTGCCCAGGGACCGGTGATAGCC
GGACGCCATGTGGATCACCTGAATGTGCAGCTGCCCACGCTGCCCAATGG
CTTGATACCTGGCTTGCAGTTGGCACAAAAGCGCAGCGATGTTTCGTCCA
GTCAGCTGCAGCTGACGGATACCAAGGGCAAGAACAACTTCTCCGGATCG
GGCAAAAGTCGGGAACGGGCCTTCTATGCCGGACGTACTTCATACGATGT
TCCCCAGAGCAGCGTTGGTCGACTGCCCAACGATATCACACAGCAACTGC
GACGCCGGTTGCGGCGCTTCTGAACGAGATTTTGAGACGAACGAGCTAGG
ACTAGTACCTTAACTTATAGCTAAATTAGTAAACTATTTATGCCTAAGCT
AAGACTACAATTGTACCATATATAGATCACTTTTTTAAAAATCATACTCT
ACTCGTATGTATGTGTGTGTATATTTTTGCATATTTATTGATAAATAAGA
CGAAGAAATTTACAAAAAAAAAAAAAAAA

RE19838.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:26:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG5756-RB 2737 CG5756-RB 64..2731 1..2668 13295 99.8 Plus
CG5756.a 4268 CG5756.a 172..1579 1..1408 7025 99.9 Plus
CG5756-RA 4115 CG5756-RA 64..1471 1..1408 7025 99.9 Plus
CG5756.a 4268 CG5756.a 3013..4268 1408..2663 6250 99.8 Plus
CG5756-RA 4115 CG5756-RA 2860..4115 1408..2663 6250 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:03:03
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 13988155..13989276 2663..1542 5550 99.6 Minus
chr2R 21145070 chr2R 13991095..13992034 1408..469 4595 99.3 Minus
chr2R 21145070 chr2R 13995252..13995494 243..1 1215 100 Minus
chr2R 21145070 chr2R 13992176..13992406 472..242 1095 98.3 Minus
chr2R 21145070 chr2R 13989331..13989467 1544..1408 685 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:40:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:03:00
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18101056..18102182 2668..1542 5605 99.8 Minus
2R 25286936 2R 18104001..18104940 1408..469 4685 99.9 Minus
2R 25286936 2R 18108144..18108386 243..1 1215 100 Minus
2R 25286936 2R 18105082..18105312 472..242 1155 100 Minus
2R 25286936 2R 18102237..18102373 1544..1408 685 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:55:00
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 18102255..18103381 2668..1542 5605 99.8 Minus
2R 25260384 2R 18105200..18106139 1408..469 4685 99.8 Minus
2R 25260384 2R 18109343..18109585 243..1 1215 100 Minus
2R 25260384 2R 18106281..18106511 472..242 1155 100 Minus
2R 25260384 2R 18103436..18103572 1544..1408 685 100 Minus
Blast to na_te.dros performed 2019-03-16 21:03:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6736..6996 1849..2124 401 65.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2219..2531 1817..2134 288 59.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2273..2467 1929..2124 220 63.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6726..6861 1986..2124 208 67.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6707..6853 1990..2134 169 63.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2273..2382 1971..2075 160 66.1 Plus
Tc1-2 1644 Tc1-2 TC1-2 1644bp 74..114 2522..2562 124 78 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 960..1034 1793..1872 117 66.2 Plus

RE19838.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:03:51 Download gff for RE19838.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 13992178..13992404 244..470 98 <- Minus
chr2R 13988155..13988742 2076..2663 99 == Minus
chr2R 13989018..13989276 1542..1800 100 == Minus
chr2R 13989429..13989466 1409..1446 100 <- Minus
chr2R 13991095..13992032 471..1408 99 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:00:34 Download gff for RE19838.complete
Subject Subject Range Query Range Percent Splice Strand
CG5756-RB 1..2229 245..2473 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:39:37 Download gff for RE19838.complete
Subject Subject Range Query Range Percent Splice Strand
CG5756-RB 1..2229 245..2473 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:31:44 Download gff for RE19838.complete
Subject Subject Range Query Range Percent Splice Strand
CG5756-RB 1..2229 245..2473 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:09:31 Download gff for RE19838.complete
Subject Subject Range Query Range Percent Splice Strand
CG5756-RB 1..2229 245..2473 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:03:35 Download gff for RE19838.complete
Subject Subject Range Query Range Percent Splice Strand
CG5756-RB 1..2229 245..2473 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:04:39 Download gff for RE19838.complete
Subject Subject Range Query Range Percent Splice Strand
CG5756-RB 1..2663 1..2663 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:39:37 Download gff for RE19838.complete
Subject Subject Range Query Range Percent Splice Strand
CG5756-RB 1..2663 1..2663 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:31:44 Download gff for RE19838.complete
Subject Subject Range Query Range Percent Splice Strand
CG5756-RB 4..2666 1..2663 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:09:31 Download gff for RE19838.complete
Subject Subject Range Query Range Percent Splice Strand
CG5756-RB 1..2663 1..2663 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:03:35 Download gff for RE19838.complete
Subject Subject Range Query Range Percent Splice Strand
CG5756-RB 4..2666 1..2663 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:03:51 Download gff for RE19838.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18101061..18102179 1545..2663 99 <- Minus
2R 18102237..18102372 1409..1544 100 <- Minus
2R 18104001..18104938 471..1408 99 <- Minus
2R 18105084..18105310 244..470 100 <- Minus
2R 18108144..18108386 1..243 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:03:51 Download gff for RE19838.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18101061..18102179 1545..2663 99 <- Minus
2R 18102237..18102372 1409..1544 100 <- Minus
2R 18104001..18104938 471..1408 99 <- Minus
2R 18105084..18105310 244..470 100 <- Minus
2R 18108144..18108386 1..243 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:03:51 Download gff for RE19838.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18101061..18102179 1545..2663 99 <- Minus
2R 18102237..18102372 1409..1544 100 <- Minus
2R 18104001..18104938 471..1408 99 <- Minus
2R 18105084..18105310 244..470 100 <- Minus
2R 18108144..18108386 1..243 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:31:44 Download gff for RE19838.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13988566..13989684 1545..2663 99 <- Minus
arm_2R 13989742..13989877 1409..1544 100 <- Minus
arm_2R 13992589..13992815 244..470 100 <- Minus
arm_2R 13991506..13992443 471..1408 99 <- Minus
arm_2R 13995649..13995891 1..243 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:43:44 Download gff for RE19838.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18102260..18103378 1545..2663 99 <- Minus
2R 18103436..18103571 1409..1544 100 <- Minus
2R 18105200..18106137 471..1408 99 <- Minus
2R 18106283..18106509 244..470 100 <- Minus
2R 18109343..18109585 1..243 100   Minus

RE19838.pep Sequence

Translation from 244 to 2472

> RE19838.pep
MWPPSSCLWLALALLVGVAQAQSGSREHFEDADKSSEYTDQQFDLRHTIP
GEPGLDYPILSSPPRTSFVCKGRHEGYYADVESRCQAFRICAHTARSPQG
FGFLCPNGTLFSQKNFVCDWYRNVNCDDSEKYYEMNEEKTVGSTHEMMER
VRHMMEYPMKTISKALQQTQSQSQNPHHSLSKDLSGASGVLSQPAAIKLN
DPETQVVGRGEDVKSEPLSAVQLGSINPGDSEDEGIYVNSLGELSSDPGI
QFDHTNAHIVAEYPREYHYQKQKNFAERVNAGLDILTDSESNSGEAMAPD
YIKHIRNTKDEAVQLDLVSNINNLLDEVSTDVDPSISGYQSMAPPKVKQP
FRFLSRGFSMQRENGKGSSSSGYGYIKPKQTPSTVRFTNFKSAQSQGSNQ
AQQNQRQQQQQHQVAKQQHHSVSSSYVKPAAAPAISSLTVPQRPQQTSQS
SVPPGIVIARAEGQRIAPNSASSIISSLATQAPVTSNQGNSYVSLNDFLN
NKFGQSPAASSNVHSAATLQQEQQPHYQQQATLSLQQQQQQQRQPVLQQQ
HQLVQQQRQPVQQQLSFISQQYQQPQQQSIYQQYKQPQQQQQQQHFQQQQ
QRTTIHTNQQPYLTPNIFVPYHQQQQQLPQFPPLAPPVSISTGNIAQGPV
IAGRHVDHLNVQLPTLPNGLIPGLQLAQKRSDVSSSQLQLTDTKGKNNFS
GSGKSRERAFYAGRTSYDVPQSSVGRLPNDITQQLRRRLRRF*

RE19838.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:17:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13204-PA 1229 GF13204-PA 1..381 1..388 1725 80 Plus
Dana\GF13204-PA 1229 GF13204-PA 880..1219 389..732 794 70.1 Plus
Dana\GF17663-PA 1133 GF17663-PA 49..163 20..138 260 37.8 Plus
Dana\GF18104-PA 200 GF18104-PA 79..172 41..136 252 48.5 Plus
Dana\GF17664-PA 407 GF17664-PA 145..251 19..137 245 43 Plus
Dana\GF24659-PA 172 GF24659-PA 1..141 1..138 242 35.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:17:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20994-PA 1230 GG20994-PA 1..388 1..388 1893 92.5 Plus
Dere\GG20994-PA 1230 GG20994-PA 1090..1230 602..742 634 92.9 Plus
Dere\GG13930-PA 1128 GG13930-PA 69..163 40..138 252 41.4 Plus
Dere\GG16372-PA 185 GG16372-PA 64..157 41..136 250 48.5 Plus
Dere\GG14914-PA 280 GG14914-PA 12..94 54..138 244 50 Plus
Dere\GG14031-PA 173 GG14031-PA 1..142 1..138 239 35.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:17:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20446-PA 965 GH20446-PA 32..394 16..388 1416 70.5 Plus
Dgri\GH18294-PA 1152 GH18294-PA 49..163 20..138 256 36.1 Plus
Dgri\GH19214-PA 197 GH19214-PA 76..169 41..136 251 48.5 Plus
Dgri\GH12969-PA 205 GH12969-PA 84..177 41..136 251 48.5 Plus
Dgri\GH15282-PA 200 GH15282-PA 88..170 54..138 237 48.8 Plus
Dgri\GH20446-PA 965 GH20446-PA 595..744 385..519 205 49.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG5756-PB 742 CG5756-PB 1..742 1..742 3861 100 Plus
CG5756-PC 1220 CG5756-PC 1..459 1..481 2064 83.8 Plus
CG5756-PC 1220 CG5756-PC 867..1220 389..742 1805 100 Plus
CG32036-PC 173 CG32036-PC 1..142 1..138 247 36.4 Plus
CG14301-PB 196 CG14301-PB 75..168 41..136 245 48.5 Plus
thw-PC 1137 CG14608-PC 62..176 20..138 245 37.8 Plus
CG13675-PD 355 CG13675-PD 55..196 54..183 237 36.6 Plus
CG13675-PC 151 CG13675-PC 55..137 54..138 234 48.8 Plus
CG14607-PB 401 CG14607-PB 156..253 35..136 231 44.7 Plus
velo-PC 1833 CG10107-PC 4..236 426..662 228 31.9 Plus
velo-PA 1833 CG10107-PA 4..236 426..662 228 31.9 Plus
NUCB1-PA 569 CG32190-PA 442..560 504..627 224 49.2 Plus
Ptip-PA 2294 CG32133-PA 650..904 342..611 221 31.6 Plus
MED25-PA 863 CG12254-PA 217..496 374..630 220 30 Plus
Ncoa6-PC 2265 CG14023-PC 645..909 374..630 215 32.1 Plus
Ncoa6-PD 2266 CG14023-PD 646..910 374..630 215 32.1 Plus
Ncoa6-PF 2467 CG14023-PF 646..910 374..630 215 32.1 Plus
Ptip-PA 2294 CG32133-PA 1049..1312 394..672 214 29.1 Plus
CG17233-PI 772 CG17233-PI 136..415 365..610 212 31.1 Plus
CG17233-PD 772 CG17233-PD 136..415 365..610 212 31.1 Plus
CG17233-PA 1173 CG17233-PA 136..415 365..610 212 31.1 Plus
corto-PD 550 CG2530-PD 79..306 361..610 209 32 Plus
corto-PC 550 CG2530-PC 79..306 361..610 209 32 Plus
corto-PB 550 CG2530-PB 79..306 361..610 209 32 Plus
corto-PE 550 CG2530-PE 79..306 361..610 209 32 Plus
corto-PA 550 CG2530-PA 79..306 361..610 209 32 Plus
Smr-PF 3601 CG4013-PF 19..259 364..616 209 29.9 Plus
Smr-PE 3601 CG4013-PE 19..259 364..616 209 29.9 Plus
Smr-PD 3601 CG4013-PD 19..259 364..616 209 29.9 Plus
X11Lbeta-PD 2066 CG32677-PD 244..472 381..602 208 28.3 Plus
X11Lbeta-PE 2129 CG32677-PE 244..472 381..602 208 28.3 Plus
X11Lbeta-PA 2139 CG32677-PA 244..472 381..602 208 28.3 Plus
Smr-PG 3607 CG4013-PG 19..265 364..616 206 29.7 Plus
CG44085-PH 756 CG44085-PH 237..444 421..627 203 34.4 Plus
CG44085-PH 756 CG44085-PH 273..568 409..712 203 30.6 Plus
CG44085-PL 833 CG44085-PL 314..521 421..627 203 34.4 Plus
CG44085-PL 833 CG44085-PL 350..645 409..712 203 30.6 Plus
CG44085-PI 833 CG44085-PI 314..521 421..627 203 34.4 Plus
CG44085-PI 833 CG44085-PI 350..645 409..712 203 30.6 Plus
CG44085-PC 836 CG44085-PC 314..521 421..627 203 34.4 Plus
CG44085-PC 836 CG44085-PC 350..645 409..712 203 30.6 Plus
CG44085-PM 864 CG44085-PM 199..406 421..627 203 34.4 Plus
CG44085-PM 864 CG44085-PM 235..530 409..712 203 30.6 Plus
CG44085-PF 902 CG44085-PF 237..444 421..627 203 34.4 Plus
CG44085-PF 902 CG44085-PF 273..568 409..712 203 30.6 Plus
CG44085-PD 918 CG44085-PD 237..444 421..627 203 34.4 Plus
CG44085-PD 918 CG44085-PD 273..568 409..712 203 30.6 Plus
CG44085-PG 942 CG44085-PG 237..444 421..627 203 34.4 Plus
CG44085-PG 942 CG44085-PG 273..568 409..712 203 30.6 Plus
CG14304-PC 942 CG14304-PC 650..734 51..137 203 43.2 Plus
CG44085-PK 979 CG44085-PK 314..521 421..627 203 34.4 Plus
CG44085-PK 979 CG44085-PK 350..645 409..712 203 30.6 Plus
CG44085-PJ 979 CG44085-PJ 314..521 421..627 203 34.4 Plus
CG44085-PJ 979 CG44085-PJ 350..645 409..712 203 30.6 Plus
CG44085-PN 1007 CG44085-PN 314..521 421..627 203 34.4 Plus
CG44085-PN 1007 CG44085-PN 350..645 409..712 203 30.6 Plus
CG14304-PB 1136 CG14304-PB 844..928 51..137 203 43.2 Plus
CG14304-PA 1136 CG14304-PA 844..928 51..137 203 43.2 Plus
ph-p-PD 1346 CG18412-PD 360..647 380..627 203 29.1 Plus
ph-p-PC 1346 CG18412-PC 360..647 380..627 203 29.1 Plus
ph-p-PB 1346 CG18412-PB 360..647 380..627 203 29.1 Plus
ph-p-PA 1589 CG18412-PA 603..890 380..627 203 29.1 Plus
CG44085-PP 2246 CG44085-PP 210..417 421..627 203 34.4 Plus
CG44085-PP 2246 CG44085-PP 246..541 409..712 203 30.6 Plus
CG44085-PO 2381 CG44085-PO 199..406 421..627 203 34.4 Plus
CG44085-PO 2381 CG44085-PO 235..530 409..712 203 30.6 Plus
velo-PC 1833 CG10107-PC 120..391 394..630 191 27 Plus
velo-PA 1833 CG10107-PA 120..391 394..630 191 27 Plus
Smr-PF 3601 CG4013-PF 8..180 476..630 190 35.8 Plus
Smr-PE 3601 CG4013-PE 8..180 476..630 190 35.8 Plus
Smr-PD 3601 CG4013-PD 8..180 476..630 190 35.8 Plus
Ptip-PA 2294 CG32133-PA 818..1108 340..630 187 28.7 Plus
Smr-PG 3607 CG4013-PG 8..186 476..630 185 35.2 Plus
Ncoa6-PC 2265 CG14023-PC 1105..1248 502..640 184 37.9 Plus
Ncoa6-PD 2266 CG14023-PD 1106..1249 502..640 184 37.9 Plus
Ncoa6-PF 2467 CG14023-PF 1106..1249 502..640 184 37.9 Plus
Ptip-PA 2294 CG32133-PA 239..479 394..625 180 30.9 Plus
Ptip-PA 2294 CG32133-PA 864..1170 379..630 179 29 Plus
Ptip-PA 2294 CG32133-PA 1487..1759 378..636 177 28.4 Plus
CG17233-PI 772 CG17233-PI 228..419 377..579 177 30.1 Plus
CG17233-PD 772 CG17233-PD 228..419 377..579 177 30.1 Plus
CG17233-PA 1173 CG17233-PA 228..419 377..579 177 30.1 Plus
Ptip-PA 2294 CG32133-PA 231..468 394..636 176 31.3 Plus
Ptip-PA 2294 CG32133-PA 378..640 391..636 175 29.6 Plus
Ptip-PA 2294 CG32133-PA 228..452 394..632 174 31.2 Plus
Ptip-PA 2294 CG32133-PA 775..1039 377..632 174 27.9 Plus
Ptip-PA 2294 CG32133-PA 194..267 522..603 173 56 Plus
Ptip-PA 2294 CG32133-PA 563..758 400..625 169 31.6 Plus
NUCB1-PA 569 CG32190-PA 387..567 507..687 165 32.4 Plus
Ptip-PA 2294 CG32133-PA 382..663 394..647 165 26.6 Plus
Ncoa6-PC 2265 CG14023-PC 1132..1233 499..601 161 43 Plus
Ncoa6-PD 2266 CG14023-PD 1133..1234 499..601 161 43 Plus
Ncoa6-PF 2467 CG14023-PF 1133..1234 499..601 161 43 Plus
CG44085-PH 756 CG44085-PH 308..715 326..728 161 24.3 Plus
CG44085-PL 833 CG44085-PL 385..792 326..728 161 24.3 Plus
CG44085-PI 833 CG44085-PI 385..792 326..728 161 24.3 Plus
CG44085-PP 2246 CG44085-PP 281..688 326..728 161 24.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:17:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19274-PA 1015 GI19274-PA 33..399 23..388 1439 72.4 Plus
Dmoj\GI24104-PA 1130 GI24104-PA 26..140 20..138 254 36.1 Plus
Dmoj\GI24248-PA 188 GI24248-PA 67..160 41..136 252 48.5 Plus
Dmoj\GI11993-PA 323 GI11993-PA 27..110 53..138 245 50.6 Plus
Dmoj\GI24105-PA 404 GI24105-PA 147..249 32..137 236 41.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:17:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10537-PA 1248 GL10537-PA 3..400 5..388 1578 75.1 Plus
Dper\GL10537-PA 1248 GL10537-PA 1107..1248 602..742 484 77.5 Plus
Dper\GL12429-PA 1215 GL12429-PA 49..163 20..138 257 37 Plus
Dper\GL23171-PA 196 GL23171-PA 75..168 41..136 251 48.5 Plus
Dper\GL12430-PA 403 GL12430-PA 152..249 36..137 237 42.7 Plus
Dper\GL17963-PA 209 GL17963-PA 90..181 49..138 219 44.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:17:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24402-PA 1250 GA24402-PA 3..400 5..388 1583 75.1 Plus
Dpse\GA24402-PA 1250 GA24402-PA 875..1250 389..742 737 58.8 Plus
Dpse\GA13107-PB 1142 GA13107-PB 49..163 20..138 255 37 Plus
Dpse\GA12890-PB 196 GA12890-PA 75..168 41..136 251 48.5 Plus
Dpse\GA13106-PA 403 GA13106-PA 152..249 36..137 237 42.7 Plus
Dpse\GA12452-PA 336 GA12452-PA 81..163 54..138 235 48.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:17:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19928-PA 1226 GM19928-PA 1..388 1..388 2027 96.6 Plus
Dsec\GM19928-PA 1226 GM19928-PA 867..1216 389..732 1057 90.1 Plus
Dsec\GM10942-PA 1121 GM10942-PA 49..163 20..138 260 37.8 Plus
Dsec\GM18694-PA 185 GM18694-PA 64..157 41..136 251 48.5 Plus
Dsec\GM24965-PA 315 GM24965-PA 42..124 54..138 239 50 Plus
Dsec\GM24865-PA 173 GM24865-PA 1..142 1..138 234 36.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:17:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25417-PA 1225 GD25417-PA 1..388 1..388 1982 94.8 Plus
Dsim\GD25417-PA 1225 GD25417-PA 867..1215 389..732 910 78.4 Plus
Dsim\GD20160-PA 185 GD20160-PA 64..157 41..136 250 48.5 Plus
Dsim\GD19923-PA 395 GD19923-PA 150..248 35..137 242 44.2 Plus
Dsim\GD13016-PA 282 GD13016-PA 12..94 54..138 239 50 Plus
Dsim\GD12917-PA 173 GD12917-PA 40..142 37..138 234 42.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:17:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22152-PA 1348 GJ22152-PA 31..398 29..388 1438 71 Plus
Dvir\GJ10927-PA 1173 GJ10927-PA 50..164 20..138 255 36.1 Plus
Dvir\GJ10929-PA 405 GJ10929-PA 139..250 18..137 253 41.3 Plus
Dvir\GJ10822-PA 191 GJ10822-PA 70..163 41..136 252 48.5 Plus
Dvir\GJ12216-PA 213 GJ12216-PA 102..184 54..138 237 51.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:18:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22055-PA 848 GK22055-PA 1..371 1..388 1446 69.8 Plus
Dwil\GK22055-PA 848 GK22055-PA 720..848 607..742 363 68.6 Plus
Dwil\GK10819-PA 1146 GK10819-PA 49..163 20..138 257 37 Plus
Dwil\GK14169-PA 180 GK14169-PA 59..152 41..136 251 48.5 Plus
Dwil\GK10820-PA 391 GK10820-PA 152..248 37..137 242 44.1 Plus
Dwil\GK19836-PA 338 GK19836-PA 41..123 54..138 240 50 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:18:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13937-PA 1226 GE13937-PA 1..387 1..388 1968 90.5 Plus
Dyak\GE13937-PA 1226 GE13937-PA 864..1216 389..732 983 78.2 Plus
Dyak\GE24913-PA 1058 GE24913-PA 48..162 20..138 260 37.8 Plus
Dyak\GE25186-PA 219 GE25186-PA 100..191 43..136 253 49.5 Plus
Dyak\GE20368-PA 282 GE20368-PA 12..94 54..138 242 50 Plus
Dyak\GE21234-PA 174 GE21234-PA 1..143 1..138 238 35.4 Plus

RE19838.hyp Sequence

Translation from 244 to 2472

> RE19838.hyp
MWPPSSCLWLALALLVGVAQAQSGSREHFEDADKSSEYTDQQFDLRHTIP
GEPGLDYPILSSPPRTSFVCKGRHEGYYADVESRCQAFRICAHTARSPQG
FGFLCPNGTLFSQKNFVCDWYRNVNCDDSEKYYEMNEEKTVGSTHEMMER
VRHMMEYPMKTISKALQQTQSQSQNPHHSLSKDLSGASGVLSQPAAIKLN
DPETQVVGRGEDVKSEPLSAVQLGSINPGDSEDEGIYVNSLGELSSDPGI
QFDHTNAHIVAEYPREYHYQKQKNFAERVNAGLDILTDSESNSGEAMAPD
YIKHIRNTKDEAVQLDLVSNINNLLDEVSTDVDPSISGYQSMAPPKVKQP
FRFLSRGFSMQRENGKGSSSSGYGYIKPKQTPSTVRFTNFKSAQSQGSNQ
AQQNQRQQQQQHQVAKQQHHSVSSSYVKPAAAPAISSLTVPQRPQQTSQS
SVPPGIVIARAEGQRIAPNSASSIISSLATQAPVTSNQGNSYVSLNDFLN
NKFGQSPAASSNVHSAATLQQEQQPHYQQQATLSLQQQQQQQRQPVLQQQ
HQLVQQQRQPVQQQLSFISQQYQQPQQQSIYQQYKQPQQQQQQQHFQQQQ
QRTTIHTNQQPYLTPNIFVPYHQQQQQLPQFPPLAPPVSISTGNIAQGPV
IAGRHVDHLNVQLPTLPNGLIPGLQLAQKRSDVSSSQLQLTDTKGKNNFS
GSGKSRERAFYAGRTSYDVPQSSVGRLPNDITQQLRRRLRRF*

RE19838.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:07:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG5756-PB 742 CG5756-PB 1..742 1..742 3861 100 Plus
CG5756-PC 1220 CG5756-PC 1..459 1..481 2064 83.8 Plus
CG5756-PC 1220 CG5756-PC 867..1220 389..742 1805 100 Plus
CG32036-PC 173 CG32036-PC 1..142 1..138 247 36.4 Plus
CG14301-PB 196 CG14301-PB 75..168 41..136 245 48.5 Plus
CG13675-PC 151 CG13675-PC 55..137 54..138 234 48.8 Plus