BDGP Sequence Production Resources |
Search the DGRC for RE19849
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 198 |
Well: | 49 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG31675-RA |
Protein status: | RE19849.pep: gold |
Sequenced Size: | 1166 |
Gene | Date | Evidence |
---|---|---|
CG14401 | 2002-01-01 | Sim4 clustering to Release 2 |
CG31675 | 2002-02-22 | Blastp of sequenced clone |
CG31675 | 2003-01-01 | Sim4 clustering to Release 3 |
CG31675 | 2008-04-29 | Release 5.5 accounting |
CG31675 | 2008-08-15 | Release 5.9 accounting |
CG31675 | 2008-12-18 | 5.12 accounting |
1166 bp (1166 high quality bases) assembled on 2002-02-22
GenBank Submission: AY084120
> RE19849.complete AGTTCGATTTCGTGTGCGGACGTCGACTGACAGACGGCTCCAAGAATTTA GCCGGGAAATCGGGGAAAATCAAAAAACAAAACTGAGGGAAAATTGGCAA CGCGTGTTTACATTTTTATTTCCTACGTGCTGAGACCCAAATAAATATAA AATAAAAGTCATTTATATAGTTGAAAACACACATTTATTTATATTCAAAA TATATACTATATTTGCTTATACAAAACATACAGTTTTGTATGTTCAAACC TCGTGCGGATCGTTTCAATTGCGCCGAGCAGAGCTATAAATAAGCCCGCC ACTTGAATTATTTTCCATAAAACCATCAAATACAACAAATTCCAATCACC AGCGAGAAAGGTGGCAAACCGATTTTCCTCCCATCAACAATGCAGCATTA TTTACTTTTGTTTGGCGCGCTCATCTCGCTACTGGCCTCAGCTTACGCCA TCAAGTGCTATGCCTGCGAATCCGTCTACGAGGCTAGTTGCGGCGACGAC TTCGAAGTCGAGAACCATTTTAAATACGACTGCGCCTTCATTGCTCCTCC GCGATTCCTGGAGAACGATCTGCTCAGCGTGAATGCCACGGCCTGTTTGA AACGGGTATTCAAGGAAAACGGCGTGCGTAAGATCGTCAGAGGCTGCTAC TTCGGCGAGGTAAATGCCACCGATGTGTGGTGCAAAATGGACCCCACCCT GTCGGCGGTGCAGAACTCAAGTTGTCATGTGTGCGACAGCGAGAACTACT GCAACGGATCGGAAAATCATCCAGTGGATAAATGGAAAATCTTCGGCAGT CTGGTCTTGTTTCTCTTGGCAACTCAACTACTCTGAGGCGACAGGAGACG AAGTGGAAATGTGGAAATGTGGAGCGTGAAATGAACATTAAAAGGCACAG TAGCTTAAGTAAACCTAGTTCAATTTAGATGTATTCCCAAGGCCCAGGAC TATCAATTAGTAAAGCCCACATTAGTAGAGCACACCATCCACAAAACCGT TTAGCCAAATCTGCCCGGCCCACTGTATTAATGGCTAATCAACGCCGAAC ATGGCGTATGAGCAACATCAGCACACCGAAATGAGCCGAAAAGCTGGCAA ACAAATTTCGAACGATCCAAATACAAACTAATAAAAACTAATTTTACACG AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 20867650..20868184 | 615..1149 | 2675 | 100 | Plus |
chr2L | 23010047 | chr2L | 20866291..20866731 | 1..441 | 2190 | 99.8 | Plus |
chr2L | 23010047 | chr2L | 20866883..20867058 | 440..615 | 880 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20869116..20869650 | 615..1149 | 2675 | 100 | Plus |
2L | 23513712 | 2L | 20867757..20868197 | 1..441 | 2205 | 100 | Plus |
2L | 23513712 | 2L | 20868349..20868524 | 440..615 | 880 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20869116..20869650 | 615..1149 | 2675 | 100 | Plus |
2L | 23513712 | 2L | 20867757..20868197 | 1..441 | 2205 | 100 | Plus |
2L | 23513712 | 2L | 20868349..20868524 | 440..615 | 880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 20866291..20866731 | 1..441 | 99 | -> | Plus |
chr2L | 20866885..20867058 | 442..615 | 100 | -> | Plus |
chr2L | 20867651..20868184 | 616..1150 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31675-RA | 1..447 | 390..836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31675-RA | 1..447 | 390..836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31675-RA | 1..447 | 390..836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31675-RA | 1..447 | 390..836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31675-RA | 1..447 | 390..836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31675-RA | 1..1149 | 1..1149 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31675-RA | 1..1149 | 1..1149 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31675-RA | 3..1151 | 1..1149 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31675-RA | 1..1149 | 1..1149 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31675-RA | 3..1151 | 1..1149 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20868351..20868524 | 442..615 | 100 | -> | Plus |
2L | 20867757..20868197 | 1..441 | 100 | -> | Plus |
2L | 20869117..20869650 | 616..1150 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20868351..20868524 | 442..615 | 100 | -> | Plus |
2L | 20867757..20868197 | 1..441 | 100 | -> | Plus |
2L | 20869117..20869650 | 616..1150 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20868351..20868524 | 442..615 | 100 | -> | Plus |
2L | 20867757..20868197 | 1..441 | 100 | -> | Plus |
2L | 20869117..20869650 | 616..1150 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 20867757..20868197 | 1..441 | 100 | -> | Plus |
arm_2L | 20868351..20868524 | 442..615 | 100 | -> | Plus |
arm_2L | 20869117..20869650 | 616..1150 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20867757..20868197 | 1..441 | 100 | -> | Plus |
2L | 20868351..20868524 | 442..615 | 100 | -> | Plus |
2L | 20869117..20869650 | 616..1150 | 99 | Plus |
Translation from 389 to 835
> RE19849.pep MQHYLLLFGALISLLASAYAIKCYACESVYEASCGDDFEVENHFKYDCAF IAPPRFLENDLLSVNATACLKRVFKENGVRKIVRGCYFGEVNATDVWCKM DPTLSAVQNSSCHVCDSENYCNGSENHPVDKWKIFGSLVLFLLATQLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20997-PA | 152 | GF20997-PA | 1..151 | 1..147 | 593 | 80.8 | Plus |
Dana\GF20975-PA | 148 | GF20975-PA | 9..147 | 6..148 | 274 | 40.3 | Plus |
Dana\GF20986-PA | 148 | GF20986-PA | 14..127 | 11..124 | 263 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10979-PA | 148 | GG10979-PA | 1..148 | 1..148 | 742 | 93.9 | Plus |
Dere\GG21265-PA | 148 | GG21265-PA | 1..148 | 1..148 | 742 | 93.9 | Plus |
Dere\GG21269-PA | 148 | GG21269-PA | 1..148 | 1..148 | 742 | 93.9 | Plus |
Dere\GG21263-PA | 148 | GG21263-PA | 9..147 | 6..148 | 261 | 39.6 | Plus |
Dere\GG21264-PA | 147 | GG21264-PA | 6..146 | 3..148 | 260 | 37.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10593-PA | 153 | GH10593-PA | 18..132 | 19..133 | 479 | 73 | Plus |
Dgri\GH10592-PA | 148 | GH10592-PA | 7..147 | 4..148 | 277 | 41.1 | Plus |
Dgri\GH10591-PA | 148 | GH10591-PA | 9..147 | 6..148 | 268 | 41 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31675-PA | 148 | CG31675-PA | 1..148 | 1..148 | 801 | 100 | Plus |
CG9336-PA | 148 | CG9336-PA | 9..147 | 6..148 | 267 | 40.3 | Plus |
CG9338-PB | 147 | CG9338-PB | 8..146 | 5..148 | 258 | 38.2 | Plus |
CG9338-PA | 147 | CG9338-PA | 8..146 | 5..148 | 258 | 38.2 | Plus |
CG9336-PB | 115 | CG9336-PB | 4..114 | 34..148 | 195 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23220-PA | 153 | GI23220-PA | 20..146 | 21..148 | 497 | 67.2 | Plus |
Dmoj\GI23209-PA | 148 | GI23209-PA | 20..147 | 17..148 | 270 | 42.9 | Plus |
Dmoj\GI23198-PA | 148 | GI23198-PA | 9..147 | 6..148 | 264 | 41.7 | Plus |
Dmoj\GI23230-PA | 148 | GI23230-PA | 19..125 | 17..124 | 133 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18530-PA | 150 | GL18530-PA | 1..149 | 1..147 | 588 | 80.7 | Plus |
Dper\GL18529-PA | 148 | GL18529-PA | 8..147 | 5..148 | 267 | 39.3 | Plus |
Dper\GL25347-PA | 148 | GL25347-PA | 14..147 | 11..148 | 258 | 41 | Plus |
Dper\GL18528-PA | 115 | GL18528-PA | 4..114 | 34..148 | 195 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16386-PA | 150 | GA16386-PA | 1..149 | 1..147 | 583 | 79.3 | Plus |
Dpse\GA25674-PA | 148 | GA25674-PA | 8..147 | 5..148 | 267 | 39.3 | Plus |
Dpse\GA21711-PA | 146 | GA21711-PA | 16..145 | 15..148 | 246 | 39.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23383-PA | 148 | GM23383-PA | 1..148 | 1..148 | 772 | 97.3 | Plus |
Dsec\GM23380-PA | 148 | GM23380-PA | 9..147 | 6..148 | 270 | 40.3 | Plus |
Dsec\GM23382-PA | 141 | GM23382-PA | 2..140 | 5..148 | 264 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24292-PA | 148 | GD24292-PA | 1..148 | 1..148 | 774 | 98 | Plus |
Dsim\GD24291-PA | 245 | GD24291-PA | 108..244 | 7..148 | 271 | 40.1 | Plus |
Dsim\GD24290-PA | 148 | GD24290-PA | 9..147 | 6..148 | 269 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23718-PA | 265 | GJ23718-PA | 2..141 | 3..143 | 552 | 71.6 | Plus |
Dvir\GJ23708-PA | 148 | GJ23708-PA | 20..147 | 17..148 | 274 | 42.9 | Plus |
Dvir\GJ23697-PA | 148 | GJ23697-PA | 9..147 | 6..148 | 266 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15445-PA | 125 | GK15445-PA | 1..125 | 1..124 | 541 | 79.2 | Plus |
Dwil\GK15443-PA | 148 | GK15443-PA | 8..129 | 5..126 | 257 | 43.1 | Plus |
Dwil\GK15441-PA | 149 | GK15441-PA | 6..148 | 3..148 | 250 | 37.2 | Plus |
Dwil\GK15444-PA | 148 | GK15444-PA | 8..129 | 5..126 | 242 | 39.8 | Plus |
Dwil\GK15446-PA | 151 | GK15446-PA | 3..139 | 1..132 | 140 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12887-PA | 148 | GE12887-PA | 1..148 | 1..148 | 737 | 92.6 | Plus |
Dyak\GE12885-PA | 148 | GE12885-PA | 9..147 | 6..148 | 263 | 38.9 | Plus |
Dyak\GE12886-PA | 147 | GE12886-PA | 6..146 | 3..148 | 261 | 37 | Plus |
Translation from 389 to 835
> RE19849.hyp MQHYLLLFGALISLLASAYAIKCYACESVYEASCGDDFEVENHFKYDCAF IAPPRFLENDLLSVNATACLKRVFKENGVRKIVRGCYFGEVNATDVWCKM DPTLSAVQNSSCHVCDSENYCNGSENHPVDKWKIFGSLVLFLLATQLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31675-PA | 148 | CG31675-PA | 1..148 | 1..148 | 801 | 100 | Plus |
CG9336-PA | 148 | CG9336-PA | 9..147 | 6..148 | 267 | 40.3 | Plus |
CG9338-PB | 147 | CG9338-PB | 8..146 | 5..148 | 258 | 38.2 | Plus |
CG9338-PA | 147 | CG9338-PA | 8..146 | 5..148 | 258 | 38.2 | Plus |
CG9336-PB | 115 | CG9336-PB | 4..114 | 34..148 | 195 | 37.1 | Plus |