BDGP Sequence Production Resources |
Search the DGRC for RE20516
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 205 |
Well: | 16 |
Vector: | pFlc-1 |
Associated Gene/Transcript | isoQC-RA |
Protein status: | RE20516.pep: gold |
Preliminary Size: | 1320 |
Sequenced Size: | 1989 |
Gene | Date | Evidence |
---|---|---|
CG5976 | 2004-10-12 | Blastp of sequenced clone |
CG5976 | 2008-04-29 | Release 5.5 accounting |
CG5976 | 2008-08-15 | Release 5.9 accounting |
CG5976 | 2008-12-18 | 5.12 accounting |
1989 bp (1989 high quality bases) assembled on 2004-10-12
GenBank Submission: BT016015
> RE20516.complete AAATAATACGCGTAAACAAAACGATTTTGGTTGAATTAGTAAACAAGGAA ATTAAATGATTTTTGAGAGGAGTGCAATAAATTACTGATGGGAAACAAAT AGACACCCACAACGAGCGTTACCTATAGACAGTGTTATTTTCGTTAGCAT TTTGACCCCCTTTGCGACGCCCATTTTTGTTATTTTGTGCCTTACAAGTC GGCCGTAAAAACTGGCCAAAATGATAATTTAATAGACTCGCCAAAGGGTC TTAAGTACAAGCCGGAGTGTGCCGCAAAATAGTTGCGCAGCCGGATGACC AATCTTTAAACTTCTTACGAACCTGCCGCTATTGATTGCAACCACCTGTT GGGACACAACACTCCCACCGCCGAACAAAAACACTCAGCCACGTAGTCTT AAGTCAGTCGGTTAAATATGCTACATCGAACAGCTAGAATGTGGACGCTG TGCGTGCAGACAGCTTTGATAGCCACCTTGGTGAGGGGATCCACTTCCCA GAAGGATAATCTCGTAGGAAGAACACAGATATCCTACAATCCCAGCGAGC TCTCCGAGCCCCGATTCCTGGAGTACAGCAATCTATCCGATAAGCTACAC CTAAGGGAAGCCATTGACAAAATCCTTATACCTCGAGTTGTGGGCACAAC AAATCATAGCATCGTTCGCGAATACATCGTCCAGAGTTTGAGGGATCTAG ACTGGGATGTGGAAGTAAACAGCTTTCATGATCACGCTCCCATCAAAGGC AAATTGCATTTCCACAACATCATCGCCACCCTGAATCCAAATGCTGAGAG ATATCTGGTGCTGTCCTGCCATTATGATAGCAAATACATGCCTGGAGTGG AATTCCTGGGGGCCACCGACTCGGCAGTGCCCTGTGCCATGCTCCTCAAC CTGGCCCAGGTGCTTCAGGAGCAGTTGAAACCCCTCAAGAAGAGCAAACT GAGTTTGATGCTCTTGTTCTTCGATGGCGAGGAGGCTTTTGAGGAGTGGG GACCCAAGGACTCCATCTATGGAGCACGACACCTGGCCAAAAAGTGGCAC CATGAAGGAAAACTTGATAGAATAGATATGCTGGTGCTCCTGGATCTGTT GGGAGCCCCCGATCCGGCATTCTACAGCTTCTTCGAAAACACCGAGTCCT GGTACATGCGTATCCAGTCCGTGGAGACACGTCTTGCCAAGTTGCAGCTC CTGGAGCGCTATGCCAGCAGTGGAGTTGCCCAGCGCGACCCCACCCGCTA CTTCCAGTCGCAGGCCATGCGATCCTCTTTCATCGAGGACGATCACATAC CCTTCCTGCGGCGAAATGTGCCGATCTTGCACCTCATTCCGGTGCCCTTT CCCAGTGTATGGCATACGCCCGACGATAACGCCAGCGTGATCGATTATGC GACGACGGACAACCTGGCACTGATTATACGGCTCTTCGCTTTGGAGTATC TGCTGGCCGGAACCGAGGCCAAGTAGTCAAGTGGGCTTCCGTGTGAATCA CAAATGACAAATGTTGTATCTACTTCAGGCCTTATCTAATTGACCTGTTC CAGTATCGGAGCATTGTTGGAAGTTCTTATGCCCGCCGGAAGATCCCTAG AAAACCTTGTTGTAACCGACTGCGTGCTTTAAAACTAATAAGGGAAGATC TGCAACACGCGTACTCCAAATATTTTTATACACATGTATTTATAGAAAAT GCTTAGCTAATGACACGTCAGGTTTATATATTTTTTGTAATCTTTCGGTT GTAAATTGTTTCACTTATGTAAGTTAACTAAGTTAACCGGACTGATTGTC CGCACACCAGCACCGGTCAAATTGCTGACCAAGCATTTGGCCGGAAGCTC ATGCATAGCCGGCAGAAGCTCTGCGCATTGGCAGAGGCCGCTATGATGTT TTTCCCTTTGTTAGCTTATAGTCAGTTTGATTTTGTATTCAATAAAGAGC GCATCGCGCCTTCAATCAACTCCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 20464573..20466021 | 525..1973 | 7230 | 99.9 | Plus |
chr3L | 24539361 | chr3L | 20463982..20464509 | 1..528 | 2595 | 99.4 | Plus |
chrU | 10048995 | chrU | 9264542..9264747 | 1973..1768 | 1015 | 99.5 | Minus |
chr3L | 24539361 | chr3L | 20472958..20473159 | 1772..1973 | 1010 | 100 | Plus |
chrX | 22417052 | chrX | 10240343..10240550 | 1766..1973 | 1010 | 99 | Plus |
chr2L | 23010047 | chr2L | 3251125..3251328 | 1770..1973 | 1005 | 99.5 | Plus |
chrX | 22417052 | chrX | 4996371..4996573 | 1973..1771 | 1000 | 99.5 | Minus |
chrX | 22417052 | chrX | 4989267..4989468 | 1973..1772 | 995 | 99.5 | Minus |
chrX | 22417052 | chrX | 10247453..10247654 | 1772..1973 | 995 | 99.5 | Plus |
chr2L | 23010047 | chr2L | 3258231..3258432 | 1772..1973 | 995 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 26904020..26904227 | 1973..1766 | 995 | 98.6 | Minus |
chr3R | 27901430 | chr3R | 26896883..26897084 | 1973..1772 | 980 | 99 | Minus |
chrX | 22417052 | chrX | 21596595..21596760 | 1927..1762 | 785 | 98.2 | Minus |
chr2RHet | 3288813 | chr2RHet | 2930126..2930285 | 1768..1927 | 785 | 99.4 | Plus |
chrU | 10048995 | chrU | 1040809..1040965 | 1771..1927 | 770 | 99.4 | Plus |
chrU | 10048995 | chrU | 8814465..8814621 | 1927..1771 | 770 | 99.4 | Minus |
chrU | 10048995 | chrU | 8644616..8644771 | 1927..1772 | 765 | 99.4 | Minus |
chrX | 22417052 | chrX | 21589370..21589525 | 1927..1772 | 765 | 99.4 | Minus |
chr3R | 27901430 | chr3R | 3521765..3521925 | 1767..1927 | 760 | 98.1 | Plus |
chr3R | 27901430 | chr3R | 3528995..3529150 | 1772..1927 | 750 | 98.7 | Plus |
chrX | 22417052 | chrX | 21614156..21614356 | 1973..1772 | 525 | 85.1 | Minus |
chrU | 10048995 | chrU | 1006639..1006785 | 1770..1917 | 510 | 91.2 | Plus |
chrU | 10048995 | chrU | 4331344..4331490 | 1917..1770 | 510 | 91.2 | Minus |
chrU | 10048995 | chrU | 9715961..9716161 | 1973..1772 | 510 | 84.7 | Minus |
chrX | 22417052 | chrX | 21572586..21572786 | 1973..1772 | 510 | 84.7 | Minus |
chrX | 22417052 | chrX | 21664611..21664757 | 1917..1770 | 510 | 91.2 | Minus |
chrXHet | 204175 | chrXHet | 180716..180853 | 1766..1903 | 480 | 89.9 | Plus |
chrU | 10048995 | chrU | 5677054..5677184 | 1765..1896 | 475 | 92.4 | Plus |
chr2RHet | 3288813 | chr2RHet | 947395..947540 | 1917..1771 | 475 | 89.8 | Minus |
chr2RHet | 3288813 | chr2RHet | 939412..939556 | 1917..1772 | 470 | 89.7 | Minus |
chr3LHet | 2555433 | chr3LHet | 7781..7914 | 1772..1903 | 455 | 91 | Plus |
chr2R | 21145070 | chr2R | 907637..907769 | 1896..1765 | 450 | 91 | Minus |
chr2R | 21145070 | chr2R | 1505210..1505335 | 1896..1770 | 450 | 92.1 | Minus |
chr3LHet | 2555433 | chr3LHet | 583750..583890 | 1903..1765 | 445 | 89.4 | Minus |
chrU | 10048995 | chrU | 2986490..2986613 | 1772..1896 | 440 | 92 | Plus |
chr3LHet | 2555433 | chr3LHet | 5200..5333 | 1772..1903 | 440 | 90.3 | Plus |
chr2LHet | 368865 | chr2LHet | 311243..311366 | 1896..1772 | 440 | 92 | Minus |
chr3L | 24539361 | chr3L | 23831339..23831472 | 1770..1903 | 430 | 88.1 | Plus |
chrU | 10048995 | chrU | 122608..122747 | 1903..1764 | 430 | 87.1 | Minus |
chrU | 10048995 | chrU | 1945410..1945531 | 1772..1894 | 430 | 91.9 | Plus |
chr2RHet | 3288813 | chr2RHet | 1483149..1483270 | 1772..1894 | 430 | 91.9 | Plus |
chr2RHet | 3288813 | chr2RHet | 1490151..1490272 | 1772..1894 | 430 | 91.9 | Plus |
chr2RHet | 3288813 | chr2RHet | 1496375..1496496 | 1772..1894 | 430 | 91.9 | Plus |
chr2LHet | 368865 | chr2LHet | 317732..317853 | 1892..1770 | 430 | 91.9 | Minus |
chr3LHet | 2555433 | chr3LHet | 11734..11867 | 1772..1903 | 425 | 89.6 | Plus |
chrU | 10048995 | chrU | 9092986..9093113 | 1769..1896 | 415 | 88.3 | Plus |
chrU | 10048995 | chrU | 1029067..1029166 | 1871..1772 | 410 | 94 | Minus |
chr3L | 24539361 | chr3L | 23183199..23183327 | 1766..1894 | 390 | 86.8 | Plus |
chr3L | 24539361 | chr3L | 23535370..23535498 | 1766..1894 | 390 | 86.8 | Plus |
chrU | 10048995 | chrU | 5918568..5918658 | 1862..1772 | 380 | 94.5 | Minus |
chrX | 22417052 | chrX | 21630100..21630220 | 1903..1783 | 380 | 87.6 | Minus |
chr2R | 21145070 | chr2R | 1477497..1477587 | 1772..1862 | 380 | 94.5 | Plus |
chr2RHet | 3288813 | chr2RHet | 1476936..1477046 | 1783..1894 | 375 | 91.1 | Plus |
chr3LHet | 2555433 | chr3LHet | 888426..888515 | 1898..1809 | 375 | 94.4 | Minus |
chr2R | 21145070 | chr2R | 1484056..1484146 | 1772..1862 | 365 | 93.4 | Plus |
chrU | 10048995 | chrU | 2888756..2888844 | 1808..1896 | 340 | 92.1 | Plus |
chr2R | 21145070 | chr2R | 776526..776656 | 1903..1773 | 340 | 84 | Minus |
chr2L | 23010047 | chr2L | 21576507..21576586 | 1849..1770 | 325 | 93.8 | Minus |
chr3LHet | 2555433 | chr3LHet | 26095..26222 | 1896..1766 | 260 | 81.7 | Minus |
chr3LHet | 2555433 | chr3LHet | 2500925..2501105 | 1973..1790 | 260 | 81.1 | Minus |
chr3LHet | 2555433 | chr3LHet | 2493678..2493835 | 1973..1813 | 250 | 82.7 | Minus |
chrU | 10048995 | chrU | 3119107..3119287 | 1973..1790 | 245 | 80.5 | Minus |
chr2R | 21145070 | chr2R | 1470956..1471040 | 1832..1917 | 245 | 88.4 | Plus |
chr3L | 24539361 | chr3L | 23834719..23834787 | 1835..1903 | 240 | 89.9 | Plus |
chrU | 10048995 | chrU | 5776080..5776237 | 1813..1973 | 235 | 82.1 | Plus |
chr2L | 23010047 | chr2L | 22680789..22680862 | 1903..1830 | 235 | 87.8 | Minus |
chr3L | 24539361 | chr3L | 24463088..24463268 | 1790..1973 | 230 | 80 | Plus |
chrU | 10048995 | chrU | 6182656..6182722 | 1772..1838 | 230 | 89.6 | Plus |
chr3LHet | 2555433 | chr3LHet | 1237736..1237916 | 1790..1973 | 230 | 80 | Plus |
chr2R | 21145070 | chr2R | 1204686..1204748 | 1834..1772 | 225 | 90.5 | Minus |
chrU | 10048995 | chrU | 1061598..1061778 | 1973..1790 | 220 | 77.2 | Minus |
chr2RHet | 3288813 | chr2RHet | 1007742..1007806 | 1834..1770 | 205 | 87.7 | Minus |
chr2RHet | 3288813 | chr2RHet | 1084845..1084897 | 1824..1772 | 205 | 92.5 | Minus |
chr2RHet | 3288813 | chr2RHet | 958774..958838 | 1770..1834 | 205 | 87.7 | Plus |
chr2R | 21145070 | chr2R | 1470912..1470959 | 1765..1812 | 195 | 93.8 | Plus |
chr3LHet | 2555433 | chr3LHet | 2474286..2474365 | 1771..1850 | 190 | 82.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 20475561..20477010 | 525..1974 | 7250 | 100 | Plus |
3L | 28110227 | 3L | 20474970..20475497 | 1..528 | 2640 | 100 | Plus |
3L | 28110227 | 3L | 27224886..27225092 | 1768..1974 | 1020 | 99.5 | Plus |
3L | 28110227 | 3L | 20483946..20484148 | 1772..1974 | 1015 | 100 | Plus |
X | 23542271 | X | 10348848..10349056 | 1766..1974 | 1015 | 99 | Plus |
2L | 23513712 | 2L | 3251547..3251751 | 1770..1974 | 1010 | 99.5 | Plus |
X | 23542271 | X | 5103635..5103838 | 1974..1771 | 1005 | 99.5 | Minus |
3L | 28110227 | 3L | 27232029..27232231 | 1772..1974 | 1000 | 99.5 | Plus |
X | 23542271 | X | 5096531..5096733 | 1974..1772 | 1000 | 99.5 | Minus |
X | 23542271 | X | 10355958..10356160 | 1772..1974 | 1000 | 99.5 | Plus |
2L | 23513712 | 2L | 3258653..3258855 | 1772..1974 | 1000 | 99.5 | Plus |
3R | 32079331 | 3R | 31081624..31081832 | 1974..1766 | 1000 | 98.6 | Minus |
3R | 32079331 | 3R | 31074487..31074689 | 1974..1772 | 985 | 99 | Minus |
3L | 28110227 | 3L | 27520719..27520878 | 1927..1768 | 785 | 99.4 | Minus |
3L | 28110227 | 3L | 27829808..27829967 | 1927..1768 | 785 | 99.4 | Minus |
X | 23542271 | X | 21731437..21731602 | 1927..1762 | 785 | 98.2 | Minus |
X | 23542271 | X | 21908124..21908280 | 1927..1771 | 770 | 99.4 | Minus |
3L | 28110227 | 3L | 27813523..27813678 | 1927..1772 | 765 | 99.4 | Minus |
X | 23542271 | X | 21724212..21724367 | 1927..1772 | 765 | 99.4 | Minus |
3CEN | 744266 | 3CEN | 284869..285024 | 1927..1772 | 765 | 99.4 | Minus |
3R | 32079331 | 3R | 7695705..7695865 | 1767..1927 | 760 | 98.1 | Plus |
3R | 32079331 | 3R | 7702935..7703090 | 1772..1927 | 750 | 98.7 | Plus |
X | 23542271 | X | 21748997..21749198 | 1974..1772 | 530 | 85.2 | Minus |
X | 23542271 | X | 21707427..21707628 | 1974..1772 | 515 | 84.7 | Minus |
X | 23542271 | X | 21799453..21799599 | 1917..1770 | 510 | 91.2 | Minus |
X | 23542271 | X | 21869840..21869986 | 1917..1770 | 510 | 91.2 | Minus |
X | 23542271 | X | 21942769..21942915 | 1917..1770 | 510 | 91.2 | Minus |
Xmm | 1049845 | Xmm | 900015..900161 | 1917..1770 | 510 | 91.2 | Minus |
X | 23542271 | X | 23201838..23201975 | 1766..1903 | 480 | 89.9 | Plus |
2R | 25286936 | 2R | 5020086..5020217 | 1896..1765 | 480 | 90.9 | Minus |
3R | 32079331 | 3R | 364641..364771 | 1765..1896 | 475 | 92.4 | Plus |
2R | 25286936 | 2R | 2204261..2204406 | 1917..1771 | 475 | 89.8 | Minus |
2R | 25286936 | 2R | 2196279..2196423 | 1917..1772 | 470 | 89.7 | Minus |
3L | 28110227 | 3L | 24559992..24560125 | 1772..1903 | 455 | 91 | Plus |
2R | 25286936 | 2R | 5617837..5617962 | 1896..1770 | 450 | 92.1 | Minus |
3L | 28110227 | 3L | 23842439..23842572 | 1770..1903 | 445 | 88.8 | Plus |
3L | 28110227 | 3L | 25098295..25098435 | 1903..1765 | 445 | 89.4 | Minus |
3L | 28110227 | 3L | 24557411..24557544 | 1772..1903 | 440 | 90.3 | Plus |
2L | 23513712 | 2L | 23456064..23456187 | 1896..1772 | 440 | 92 | Minus |
3R | 32079331 | 3R | 376056..376179 | 1772..1896 | 440 | 92 | Plus |
2L | 23513712 | 2L | 23462561..23462682 | 1892..1770 | 430 | 91.9 | Minus |
2R | 25286936 | 2R | 545492..545631 | 1903..1764 | 430 | 87.1 | Minus |
2R | 25286936 | 2R | 2713193..2713314 | 1772..1894 | 430 | 91.9 | Plus |
2R | 25286936 | 2R | 2719417..2719538 | 1772..1894 | 430 | 91.9 | Plus |
3L | 28110227 | 3L | 24563945..24564078 | 1772..1903 | 425 | 89.6 | Plus |
Y | 3667352 | Y | 677608..677735 | 1769..1896 | 415 | 88.3 | Plus |
X | 23542271 | X | 21919923..21920022 | 1772..1871 | 410 | 94 | Plus |
3L | 28110227 | 3L | 23194267..23194395 | 1766..1894 | 390 | 86.8 | Plus |
3L | 28110227 | 3L | 23546450..23546578 | 1766..1894 | 390 | 86.8 | Plus |
X | 23542271 | X | 21764942..21765062 | 1903..1783 | 380 | 87.6 | Minus |
2R | 25286936 | 2R | 5590140..5590230 | 1772..1862 | 380 | 94.5 | Plus |
U | 3151297 | U | 2647128..2647218 | 1862..1772 | 380 | 94.5 | Minus |
3L | 28110227 | 3L | 25457759..25457848 | 1898..1809 | 375 | 94.4 | Minus |
2R | 25286936 | 2R | 2706196..2706306 | 1783..1894 | 375 | 91.1 | Plus |
2R | 25286936 | 2R | 5596699..5596789 | 1772..1862 | 365 | 93.4 | Plus |
2R | 25286936 | 2R | 4888955..4889085 | 1903..1773 | 340 | 84 | Minus |
Y | 3667352 | Y | 2611463..2611551 | 1896..1808 | 340 | 92.1 | Minus |
2L | 23513712 | 2L | 21578012..21578091 | 1849..1770 | 325 | 93.8 | Minus |
3L | 28110227 | 3L | 27377999..27378180 | 1974..1790 | 265 | 81.2 | Minus |
Y | 3667352 | Y | 684726..684853 | 1896..1766 | 260 | 81.7 | Minus |
3L | 28110227 | 3L | 27370752..27370910 | 1974..1813 | 255 | 82.8 | Minus |
X | 23542271 | X | 22125810..22125991 | 1974..1790 | 250 | 80.6 | Minus |
2R | 25286936 | 2R | 5583599..5583683 | 1832..1917 | 245 | 88.4 | Plus |
3L | 28110227 | 3L | 23845819..23845887 | 1835..1903 | 240 | 89.9 | Plus |
2L | 23513712 | 2L | 22524896..22525054 | 1813..1974 | 240 | 82.2 | Plus |
3R | 32079331 | 3R | 884605..884679 | 1874..1800 | 240 | 88 | Minus |
2R | 25286936 | 2R | 3822361..3822519 | 1813..1974 | 240 | 82.2 | Plus |
3L | 28110227 | 3L | 24474187..24474368 | 1790..1974 | 235 | 80.1 | Plus |
3L | 28110227 | 3L | 25855078..25855259 | 1790..1974 | 235 | 80.1 | Plus |
X | 23542271 | X | 23438329..23438510 | 1790..1974 | 235 | 80.1 | Plus |
2L | 23513712 | 2L | 22789563..22789636 | 1903..1830 | 235 | 87.8 | Minus |
3R | 32079331 | 3R | 871502..871566 | 1836..1772 | 235 | 90.8 | Minus |
2R | 25286936 | 2R | 863454..863527 | 1830..1903 | 235 | 87.8 | Plus |
U | 3151297 | U | 1068341..1068407 | 1772..1838 | 230 | 89.6 | Plus |
2R | 25286936 | 2R | 1485269..1485450 | 1974..1790 | 225 | 77.3 | Minus |
2R | 25286936 | 2R | 5317291..5317353 | 1834..1772 | 225 | 90.5 | Minus |
2R | 25286936 | 2R | 2215640..2215704 | 1770..1834 | 205 | 87.7 | Plus |
2R | 25286936 | 2R | 2264565..2264629 | 1834..1770 | 205 | 87.7 | Minus |
2R | 25286936 | 2R | 2312049..2312101 | 1824..1772 | 205 | 92.5 | Minus |
2R | 25286936 | 2R | 5583555..5583602 | 1765..1812 | 195 | 93.8 | Plus |
3L | 28110227 | 3L | 27351359..27351438 | 1771..1850 | 190 | 82.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 20468661..20470110 | 525..1974 | 7250 | 100 | Plus |
3L | 28103327 | 3L | 20468070..20468597 | 1..528 | 2640 | 100 | Plus |
3L | 28103327 | 3L | 27217986..27218192 | 1768..1974 | 1020 | 99.5 | Plus |
3L | 28103327 | 3L | 20477046..20477248 | 1772..1974 | 1015 | 100 | Plus |
X | 23527363 | X | 10356946..10357154 | 1766..1974 | 1015 | 99 | Plus |
2L | 23513712 | 2L | 3251547..3251751 | 1770..1974 | 1010 | 99.5 | Plus |
X | 23527363 | X | 5111733..5111936 | 1974..1771 | 1005 | 99.5 | Minus |
3L | 28103327 | 3L | 27225129..27225331 | 1772..1974 | 1000 | 99.5 | Plus |
X | 23527363 | X | 10364056..10364258 | 1772..1974 | 1000 | 99.5 | Plus |
X | 23527363 | X | 5104629..5104831 | 1974..1772 | 1000 | 99.5 | Minus |
3R | 31820162 | 3R | 30822455..30822663 | 1974..1766 | 1000 | 98.5 | Minus |
2L | 23513712 | 2L | 3258653..3258855 | 1772..1974 | 1000 | 99.5 | Plus |
3R | 31820162 | 3R | 30815318..30815520 | 1974..1772 | 985 | 99 | Minus |
3L | 28103327 | 3L | 27822908..27823067 | 1927..1768 | 785 | 99.3 | Minus |
3L | 28103327 | 3L | 27513819..27513978 | 1927..1768 | 785 | 99.3 | Minus |
X | 23527363 | X | 21716529..21716694 | 1927..1762 | 785 | 98.1 | Minus |
X | 23527363 | X | 21893216..21893372 | 1927..1771 | 770 | 99.3 | Minus |
Unimproved_211000022218732_156_860 | 704 | Unimproved_211000022218732_156_860 | 363..519 | 1927..1771 | 770 | 99.3 | Minus |
3L | 28103327 | 3L | 27806623..27806778 | 1927..1772 | 765 | 99.3 | Minus |
X | 23527363 | X | 21709304..21709459 | 1927..1772 | 765 | 99.3 | Minus |
3R | 31820162 | 3R | 7436536..7436696 | 1767..1927 | 760 | 98.1 | Plus |
3R | 31820162 | 3R | 7443766..7443921 | 1772..1927 | 750 | 98.7 | Plus |
X | 23527363 | X | 21734089..21734290 | 1974..1772 | 555 | 87.2 | Minus |
X | 23527363 | X | 21692519..21692720 | 1974..1772 | 540 | 86.7 | Minus |
X | 23527363 | X | 21927861..21928007 | 1917..1770 | 520 | 91.2 | Minus |
X | 23527363 | X | 21854932..21855078 | 1917..1770 | 520 | 91.2 | Minus |
X | 23527363 | X | 21784545..21784691 | 1917..1770 | 520 | 91.2 | Minus |
3R | 31820162 | 3R | 162219..162392 | 1765..1939 | 490 | 88 | Plus |
2R | 25260384 | 2R | 2204261..2204406 | 1917..1771 | 485 | 89.7 | Minus |
X | 23527363 | X | 23186930..23187067 | 1766..1903 | 480 | 89.8 | Plus |
2R | 25260384 | 2R | 5021285..5021416 | 1896..1765 | 480 | 90.9 | Minus |
2R | 25260384 | 2R | 2196279..2196423 | 1917..1772 | 480 | 89.7 | Minus |
3L | 28103327 | 3L | 24553092..24553225 | 1772..1903 | 465 | 91 | Plus |
2R | 25260384 | 2R | 5618993..5619161 | 1939..1770 | 465 | 87.7 | Minus |
3L | 28103327 | 3L | 25091395..25091535 | 1903..1765 | 455 | 89.3 | Minus |
2L | 23513712 | 2L | 23456021..23456187 | 1939..1772 | 455 | 87.5 | Minus |
3L | 28103327 | 3L | 24550511..24550644 | 1772..1903 | 450 | 90.2 | Plus |
3R | 31820162 | 3R | 173634..173757 | 1772..1896 | 450 | 92 | Plus |
3L | 28103327 | 3L | 23835539..23835672 | 1770..1903 | 445 | 88.8 | Plus |
2R | 25260384 | 2R | 2719417..2719538 | 1772..1894 | 440 | 91.8 | Plus |
2R | 25260384 | 2R | 2713193..2713314 | 1772..1894 | 440 | 91.8 | Plus |
2L | 23513712 | 2L | 23462561..23462682 | 1892..1770 | 440 | 91.8 | Minus |
3L | 28103327 | 3L | 24557045..24557178 | 1772..1903 | 435 | 89.5 | Plus |
2R | 25260384 | 2R | 545492..545631 | 1903..1764 | 430 | 87.1 | Minus |
Y | 3410481 | Y | 952755..952882 | 1769..1896 | 415 | 88.2 | Plus |
X | 23527363 | X | 21905015..21905114 | 1772..1871 | 410 | 94 | Plus |
3L | 28103327 | 3L | 23539550..23539711 | 1766..1928 | 400 | 84 | Plus |
3L | 28103327 | 3L | 23187367..23187528 | 1766..1928 | 400 | 84 | Plus |
2R | 25260384 | 2R | 2706196..2706306 | 1783..1894 | 385 | 91 | Plus |
X | 23527363 | X | 21750034..21750154 | 1903..1783 | 380 | 87.6 | Minus |
2R | 25260384 | 2R | 5591339..5591429 | 1772..1862 | 380 | 94.5 | Plus |
3L | 28103327 | 3L | 25450859..25450948 | 1898..1809 | 375 | 94.4 | Minus |
2R | 25260384 | 2R | 5597898..5597988 | 1772..1862 | 365 | 93.4 | Plus |
2R | 25260384 | 2R | 4890154..4890284 | 1903..1773 | 340 | 83.9 | Minus |
Unmapped_scaffold_03 | 170808 | Unmapped_scaffold_03 | 115243..115331 | 1896..1808 | 340 | 92.1 | Minus |
2L | 23513712 | 2L | 21578012..21578091 | 1849..1770 | 325 | 93.7 | Minus |
2R | 25260384 | 2R | 5584798..5584882 | 1832..1917 | 255 | 88.3 | Plus |
3L | 28103327 | 3L | 23838919..23838987 | 1835..1903 | 240 | 89.8 | Plus |
3R | 31820162 | 3R | 682183..682257 | 1874..1800 | 240 | 88 | Minus |
2R | 25260384 | 2R | 863454..863527 | 1830..1903 | 235 | 87.8 | Plus |
3R | 31820162 | 3R | 669080..669144 | 1836..1772 | 235 | 90.7 | Minus |
2L | 23513712 | 2L | 22789563..22789636 | 1903..1830 | 235 | 87.8 | Minus |
2R | 25260384 | 2R | 5318490..5318552 | 1834..1772 | 225 | 90.4 | Minus |
3L | 28103327 | 3L | 27363852..27363904 | 1974..1922 | 220 | 94.3 | Minus |
3L | 28103327 | 3L | 25848307..25848359 | 1922..1974 | 220 | 94.3 | Plus |
3L | 28103327 | 3L | 27371099..27371151 | 1974..1922 | 220 | 94.3 | Minus |
X | 23527363 | X | 22110902..22110954 | 1974..1922 | 220 | 94.3 | Minus |
2R | 25260384 | 2R | 3823666..3823718 | 1922..1974 | 220 | 94.3 | Plus |
2L | 23513712 | 2L | 22525002..22525054 | 1922..1974 | 220 | 94.3 | Plus |
Y | 3410481 | Y | 959932..960000 | 1834..1766 | 210 | 86.9 | Minus |
X | 23527363 | X | 23423550..23423602 | 1922..1974 | 205 | 92.4 | Plus |
2R | 25260384 | 2R | 2215640..2215704 | 1770..1834 | 205 | 87.6 | Plus |
2R | 25260384 | 2R | 1485269..1485321 | 1974..1922 | 205 | 92.4 | Minus |
2R | 25260384 | 2R | 2312049..2312101 | 1824..1772 | 205 | 92.4 | Minus |
2R | 25260384 | 2R | 2264565..2264629 | 1834..1770 | 205 | 87.6 | Minus |
2R | 25260384 | 2R | 5584754..5584801 | 1765..1812 | 195 | 93.7 | Plus |
3L | 28103327 | 3L | 27344459..27344538 | 1771..1850 | 190 | 82.5 | Plus |
3L | 28103327 | 3L | 24467416..24467468 | 1922..1974 | 190 | 90.5 | Plus |
2R | 25260384 | 2R | 1485719..1485802 | 1893..1809 | 190 | 83.5 | Minus |
3L | 28103327 | 3L | 24467287..24467390 | 1790..1896 | 170 | 80.3 | Plus |
3L | 28103327 | 3L | 25848178..25848252 | 1790..1864 | 165 | 81.3 | Plus |
3L | 28103327 | 3L | 27371206..27371280 | 1864..1790 | 165 | 81.3 | Minus |
X | 23527363 | X | 23423421..23423495 | 1790..1864 | 165 | 81.3 | Plus |
2R | 25260384 | 2R | 1485376..1485450 | 1864..1790 | 165 | 81.3 | Minus |
Y | 3410481 | Y | 959873..959923 | 1896..1846 | 165 | 88.2 | Minus |
3L | 28103327 | 3L | 27363959..27364010 | 1864..1813 | 155 | 86.5 | Minus |
2R | 25260384 | 2R | 3823560..3823611 | 1813..1864 | 155 | 86.5 | Plus |
2L | 23513712 | 2L | 22524896..22524947 | 1813..1864 | 155 | 86.5 | Plus |
X | 23527363 | X | 22111009..22111083 | 1864..1790 | 150 | 80 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
springer | 7546 | springer SPRINGER 7546bp Derived from BACR06P08 by Sue Celniker, 29 March 2001. | 1..202 | 1772..1973 | 992 | 99 | Plus |
springer | 7546 | springer SPRINGER 7546bp Derived from BACR06P08 by Sue Celniker, 29 March 2001. | 7138..7339 | 1772..1973 | 992 | 99 | Plus |
gypsy6 | 7826 | gypsy6 GYPSY6 7826bp | 7417..7630 | 1769..1973 | 574 | 78 | Plus |
gypsy6 | 7826 | gypsy6 GYPSY6 7826bp | 1..211 | 1772..1973 | 568 | 78.1 | Plus |
gypsy3 | 6973 | gypsy3 GYPSY3 6973bp | 31..183 | 1824..1973 | 415 | 79.6 | Plus |
gypsy3 | 6973 | gypsy3 GYPSY3 6973bp | 6606..6758 | 1824..1973 | 415 | 79.6 | Plus |
gypsy2 | 6841 | gypsy2 GYPSY2 6841bp | 42..130 | 1804..1896 | 166 | 68.8 | Plus |
gypsy2 | 6841 | gypsy2 GYPSY2 6841bp | 6530..6618 | 1804..1896 | 166 | 68.8 | Plus |
gypsy3 | 6973 | gypsy3 GYPSY3 6973bp | 1..32 | 1772..1803 | 151 | 96.9 | Plus |
gypsy3 | 6973 | gypsy3 GYPSY3 6973bp | 6576..6607 | 1772..1803 | 151 | 96.9 | Plus |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6858..6958 | 1678..1774 | 118 | 59.4 | Plus |
Dyak\HeT-A | 5691 | Dyak\HeT-A YAKHETA 5691bp | 4995..5074 | 1432..1512 | 114 | 61.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 20463982..20464509 | 1..528 | 99 | -> | Plus |
chr3L | 20464577..20465819 | 529..1771 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5976-RA | 1..1059 | 418..1476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5976-RA | 1..1059 | 418..1476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
isoQC-RA | 1..1059 | 418..1476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5976-RA | 1..1059 | 418..1476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
isoQC-RA | 1..1059 | 418..1476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5976-RA | 1..1476 | 1..1476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5976-RA | 1..1967 | 1..1967 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
isoQC-RA | 9..1975 | 1..1967 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5976-RA | 1..1476 | 1..1476 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
isoQC-RA | 9..1975 | 1..1967 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20474970..20475497 | 1..528 | 100 | -> | Plus |
3L | 20475565..20477009 | 529..1973 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20474970..20475497 | 1..528 | 100 | -> | Plus |
3L | 20475565..20477009 | 529..1973 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20474970..20475497 | 1..528 | 100 | -> | Plus |
3L | 20475565..20477009 | 529..1973 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 20468070..20468597 | 1..528 | 100 | -> | Plus |
arm_3L | 20468665..20470109 | 529..1973 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20468070..20468597 | 1..528 | 100 | -> | Plus |
3L | 20468665..20470109 | 529..1973 | 100 | Plus |
Translation from 417 to 1475
> RE20516.hyp MLHRTARMWTLCVQTALIATLVRGSTSQKDNLVGRTQISYNPSELSEPRF LEYSNLSDKLHLREAIDKILIPRVVGTTNHSIVREYIVQSLRDLDWDVEV NSFHDHAPIKGKLHFHNIIATLNPNAERYLVLSCHYDSKYMPGVEFLGAT DSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKDSI YGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQ SVETRLAKLQLLERYASSGVAQRDPTRYFQSQAMRSSFIEDDHIPFLRRN VPILHLIPVPFPSVWHTPDDNASVIDYATTDNLALIIRLFALEYLLAGTE AK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
isoQC-PA | 352 | CG5976-PA | 1..352 | 1..352 | 1835 | 100 | Plus |
isoQC-PB | 354 | CG5976-PB | 34..354 | 32..352 | 1651 | 98.8 | Plus |
CG6168-PC | 342 | CG6168-PC | 11..331 | 11..345 | 690 | 41.4 | Plus |
CG6168-PB | 342 | CG6168-PB | 11..331 | 11..345 | 690 | 41.4 | Plus |
QC-PA | 340 | CG32412-PA | 37..326 | 58..345 | 646 | 43.5 | Plus |
Translation from 417 to 1475
> RE20516.pep MLHRTARMWTLCVQTALIATLVRGSTSQKDNLVGRTQISYNPSELSEPRF LEYSNLSDKLHLREAIDKILIPRVVGTTNHSIVREYIVQSLRDLDWDVEV NSFHDHAPIKGKLHFHNIIATLNPNAERYLVLSCHYDSKYMPGVEFLGAT DSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKDSI YGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQ SVETRLAKLQLLERYASSGVAQRDPTRYFQSQAMRSSFIEDDHIPFLRRN VPILHLIPVPFPSVWHTPDDNASVIDYATTDNLALIIRLFALEYLLAGTE AK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10348-PA | 357 | GF10348-PA | 1..352 | 1..351 | 1544 | 83.2 | Plus |
Dana\GF24557-PA | 349 | GF24557-PA | 12..317 | 33..352 | 646 | 44.6 | Plus |
Dana\GF10438-PA | 356 | GF10438-PA | 45..320 | 58..329 | 625 | 43.9 | Plus |
Dana\GF10436-PA | 317 | GF10436-PA | 16..290 | 58..345 | 320 | 30.3 | Plus |
Dana\GF10437-PA | 327 | GF10437-PA | 34..306 | 57..341 | 282 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16120-PA | 390 | GG16120-PA | 40..384 | 1..345 | 1769 | 95.4 | Plus |
Dere\GG13925-PA | 341 | GG13925-PA | 11..331 | 11..345 | 751 | 45.6 | Plus |
Dere\GG14104-PA | 344 | GG14104-PA | 37..330 | 58..345 | 667 | 43.6 | Plus |
Dere\GG14103-PA | 268 | GG14103-PA | 17..204 | 58..296 | 207 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14553-PA | 362 | GH14553-PA | 10..355 | 8..352 | 1337 | 72.3 | Plus |
Dgri\GH16891-PA | 314 | GH16891-PA | 7..300 | 58..345 | 644 | 44.9 | Plus |
Dgri\GH16890-PA | 267 | GH16890-PA | 36..266 | 56..300 | 311 | 32.9 | Plus |
Dgri\GH16886-PA | 175 | GH16886-PA | 1..143 | 122..262 | 213 | 36.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
isoQC-PA | 352 | CG5976-PA | 1..352 | 1..352 | 1835 | 100 | Plus |
isoQC-PB | 354 | CG5976-PB | 34..354 | 32..352 | 1651 | 98.8 | Plus |
CG6168-PC | 342 | CG6168-PC | 11..331 | 11..345 | 690 | 41.4 | Plus |
CG6168-PB | 342 | CG6168-PB | 11..331 | 11..345 | 690 | 41.4 | Plus |
QC-PA | 340 | CG32412-PA | 37..326 | 58..345 | 646 | 43.5 | Plus |
CG32413-PB | 332 | CG32413-PB | 35..309 | 58..344 | 348 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13400-PA | 378 | GI13400-PA | 44..374 | 19..349 | 1358 | 73.7 | Plus |
Dmoj\GI12035-PA | 205 | GI12035-PA | 1..191 | 158..345 | 383 | 41.1 | Plus |
Dmoj\GI12033-PA | 273 | GI12033-PA | 36..273 | 58..309 | 308 | 33.5 | Plus |
Dmoj\GI12029-PA | 234 | GI12029-PA | 7..233 | 58..299 | 272 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12792-PA | 357 | GL12792-PA | 13..357 | 8..352 | 1631 | 86.7 | Plus |
Dper\GL22833-PA | 368 | GL22833-PA | 8..334 | 13..348 | 731 | 44 | Plus |
Dper\GL21387-PA | 265 | GL21387-PA | 33..258 | 56..297 | 300 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19273-PA | 357 | GA19273-PA | 13..357 | 8..352 | 1624 | 86.4 | Plus |
Dpse\GA19404-PA | 364 | GA19404-PA | 8..334 | 13..348 | 729 | 43.7 | Plus |
Dpse\GA16884-PA | 357 | GA16884-PA | 50..347 | 58..349 | 656 | 42.7 | Plus |
Dpse\GA16885-PA | 321 | GA16885-PA | 33..308 | 56..345 | 407 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22298-PA | 354 | GM22298-PA | 34..354 | 32..352 | 1665 | 97.2 | Plus |
Dsec\GM13888-PA | 340 | GM13888-PA | 37..326 | 58..345 | 666 | 44.2 | Plus |
Dsec\GM24759-PA | 225 | GM24759-PA | 6..209 | 115..333 | 516 | 46.1 | Plus |
Dsec\GM13887-PA | 269 | GM13887-PA | 17..204 | 58..296 | 211 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14891-PA | 391 | GD14891-PA | 40..391 | 1..352 | 1850 | 97.7 | Plus |
Dsim\GD12810-PA | 343 | GD12810-PA | 11..331 | 11..345 | 703 | 42 | Plus |
Dsim\GD13170-PA | 340 | GD13170-PA | 37..326 | 58..345 | 667 | 44.2 | Plus |
Dsim\GD13169-PA | 275 | GD13169-PA | 16..252 | 57..344 | 299 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11525-PA | 359 | GJ11525-PA | 11..358 | 8..351 | 1456 | 79.3 | Plus |
Dvir\GJ13305-PA | 342 | GJ13305-PA | 35..328 | 58..345 | 636 | 43.3 | Plus |
Dvir\GJ13304-PA | 330 | GJ13304-PA | 48..329 | 56..351 | 436 | 34.3 | Plus |
Dvir\GJ13298-PA | 278 | GJ13298-PA | 4..277 | 57..345 | 390 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12295-PA | 357 | GK12295-PA | 12..354 | 8..346 | 1471 | 80.5 | Plus |
Dwil\GK17529-PA | 343 | GK17529-PA | 44..341 | 56..350 | 659 | 43 | Plus |
Dwil\GK19272-PA | 228 | GK19272-PA | 1..199 | 131..352 | 294 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19688-PA | 351 | GE19688-PA | 1..351 | 1..352 | 1763 | 93.8 | Plus |
Dyak\GE20526-PA | 344 | GE20526-PA | 37..330 | 58..345 | 667 | 44.3 | Plus |
Dyak\GE20221-PA | 344 | GE20221-PA | 11..332 | 11..345 | 654 | 43.2 | Plus |
Dyak\GE20525-PA | 214 | GE20525-PA | 17..205 | 58..296 | 233 | 31.4 | Plus |