Clone RE20520 Report

Gene	Date	Evidence
CG17562	2002-01-01	Sim4 clustering to Release 2
CG17562	2003-01-01	Sim4 clustering to Release 3
CG17562	2003-08-05	Blastp of sequenced clone
CG17562	2008-04-29	Release 5.5 accounting
CG17562	2008-08-15	Release 5.9 accounting
CG17562	2008-12-18	5.12 accounting

Clone Sequence Records

RE20520.complete Sequence

1687 bp (1687 high quality bases) assembled on 2003-08-05

GenBank Submission: BT010010

> RE20520.complete
ATTAAAGCCGTTCTTTGTTAAAAACGACTGCAACTTTTGCTTCTATCGGA
TAGACTTTTTTTCGCCGCCAATTCAAGCGTAAACCATACTTCTAAAAATG
GATACGGATATTCAAAGATGCTTCCGGAGCAAAACGGTGTTCCTAACTGG
AGCCACCGGCTTTTTGGGTAAAGTCGTTATTGAGAAACTTTTGCGGACCA
CAGAGGTGAAACGCATCTATGTGCTAATTAGACCAAAGCGCGGAGTTGAG
ATTAAGGATCGGATTATCACCTGGTCAAAAGATGCGGTATTTGAACTGCT
GCTGAAGTCCAAGCCGGAGGCACTTCAAAGAGTATGTCCCATCGCTGGGG
ATTGCCTCGACTTTGATTTGGGAATCAGCGAGAATGATCGAAGACTTCTG
GCCTCCGAGGTGCAGATTGTCATCCATGGAGCTGCCACCGTGCGATTCAA
TGAGCCGCTTCACGTGGCCCTGGCCATCAACACAAGGGCCACCAAGCTGA
TGATTCAACTGGCCAAGGAAATGAGGCAGCTGGAGGCCTTCGTTCATGTA
TCGACCGCCTTCTCCAACTGCGTTATCTACAACATCAAGGAAAATTTCTA
CCCCGAGCATCTCAACTGCAGTTCCGATAAGGTGCTTGCAATGGCAGAGC
TGATGAGTGACGAGCTACTGGACAACATGGAGCAAGCGCTCCTTGGCTCG
TTTCCCAACACGTACACGTACACCAAAGCACTGGCGGAGGATGTGATCCT
GAAGGAAGCGGGTGGCTTGCCACTTTGCATCTTCCGACCGGCAGTCATTA
TTGCGGCCCACAAGGAACCCATCTCCGGCTGGATAGACAACATGTACGGA
CCAATGGCAATTCTTTTCGGGGTGGCCCGTGGAGTACTGCGCATTGCCAC
CATCGATCACCATGCCGAGGCAAGCCTGGTGCCCGTGGATTATTGTGCCA
ATTTGACTCTGGCCTGTACCTGGAAGACCATTGTGGAAGGTAACGAGATG
GGAACACAAGAAACTCCTCTCATCTACCAACTGGCGCCCATTGAGCAGAA
CAAGATCACCCACGGGGAGTTCATTCGACATGCTCTCGATGGACGCACCA
ACTGCCCGCTGACAAAGATGATATGGTATCCCTTCATCCACTGCATCACA
GTGCCGTGGCTCTTCCCCCTGGCAGCTTTCTTCTATCACACCCTGCCAGC
CTACTTTTTTGACCTGGCTCTCTGGCTGAGTGGCCGGAAGCCCAGACTAG
TAAAGGTTTACCAAAAGATCCACAAGACTCTCGGCATCCTGGGCCCATTC
GCCTGCAAAAGCTGGCGCTTTGACATGCGGAATACGGATCACTTGAGGCA
GCAGATGTCGGAGGAGGATCGAAGGATATACTACTTTGATATGGTCAGCC
TCAACTGGAAGGAATACTTCGTTCAAGCTCTGCGTGGCATGAGACAGTTC
TTGGGAAACGAGGCACCCACCCCAGAGTCCATTGCACAGGGCAAGAAGCT
CATTAAGCGTTTAAAGCTGCTCCATCATATCCTGCAAGGTGTCCTTTGCT
TTGTGGCACTACTAGCACTGTGGTCGTTGGTAAGGATCCTAGTCTGATTC
AGCAGTACATAGGCAACCCACCGACTCACTTTCGTAATTGCGTCATGGAA
TTAAATAAATATATACAACACAAAAAAAAAAAAAAAA

RE20520.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:49:50

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
CG17562-RA	1900	CG17562-RA	230..1900	1..1671	8355	100	Plus
CG14893-RB	1842	CG14893-RB	463..675	407..619	390	78.8	Plus
CG17560-RA	1732	CG17560-RA	647..746	693..792	290	86	Plus
CG17560-RA	1732	CG17560-RA	451..527	497..573	220	85.7	Plus
CG17560-RA	1732	CG17560-RA	352..434	398..480	205	83.1	Plus
CG17560-RA	1732	CG17560-RA	49..200	95..246	190	75	Plus
CG14893-RB	1842	CG14893-RB	192..275	136..219	180	80.9	Plus
CG14893-RB	1842	CG14893-RB	757..800	701..744	160	90.9	Plus

Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:47:54

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chr3R	27901430	chr3R	12440775..12441486	798..1509	3560	100	Plus
chr3R	27901430	chr3R	12440206..12440717	286..797	2530	99.6	Plus
chr3R	27901430	chr3R	12439865..12440153	1..289	1445	100	Plus
chr3R	27901430	chr3R	12441545..12441707	1509..1671	815	100	Plus
chr3R	27901430	chr3R	12442873..12443335	330..792	575	74.9	Plus
chr3R	27901430	chr3R	12445842..12446179	407..744	400	74.6	Plus
chr3R	27901430	chr3R	8217458..8217624	573..407	250	76.6	Minus

Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:40:50 has no hits.

Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:47:53

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
3R	32079331	3R	16616222..16616933	798..1509	3560	100	Plus
3R	32079331	3R	16615653..16616164	286..797	2560	100	Plus
3R	32079331	3R	16615312..16615600	1..289	1445	100	Plus
3R	32079331	3R	16616992..16617155	1509..1672	820	100	Plus
3R	32079331	3R	16618320..16618782	330..792	575	74.9	Plus
3R	32079331	3R	16621289..16621626	407..744	400	74.6	Plus
3R	32079331	3R	12392072..12392238	573..407	250	76.6	Minus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:15:52

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
3R	31820162	3R	16357053..16357764	798..1509	3560	100	Plus
3R	31820162	3R	16356484..16356995	286..797	2560	100	Plus
3R	31820162	3R	16356143..16356431	1..289	1445	100	Plus
3R	31820162	3R	16357823..16357986	1509..1672	820	100	Plus
3R	31820162	3R	16362120..16362332	407..619	390	78.8	Plus
3R	31820162	3R	16359514..16359613	693..792	290	86	Plus
3R	31820162	3R	12132903..12133069	573..407	250	76.6	Minus
3R	31820162	3R	16359318..16359394	497..573	220	85.7	Plus
3R	31820162	3R	16359219..16359301	398..480	205	83.1	Plus
3R	31820162	3R	16362414..16362457	701..744	160	90.9	Plus

Blast to na_te.dros performed on 2019-03-16 04:47:53 has no hits.

RE20520.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:48:35 Download gff for RE20520.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chr3R	12439865..12440150	1..286	100	->	Plus
chr3R	12440207..12440717	287..797	99	->	Plus
chr3R	12440775..12441486	798..1509	100	->	Plus
chr3R	12441546..12441707	1510..1671	100		Plus

Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:01:02 Download gff for RE20520.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG17562-RA	1..1500	98..1597	100		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:18:47 Download gff for RE20520.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG17562-RA	1..1500	98..1597	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:42:25 Download gff for RE20520.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG17562-RA	1..1500	98..1597	100		Plus

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:44:55 Download gff for RE20520.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG17562-RA	1..1500	98..1597	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:51:11 Download gff for RE20520.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG17562-RA	1..1500	98..1597	100		Plus

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:51:56 Download gff for RE20520.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG17562-RA	2..1672	1..1671	100		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:18:47 Download gff for RE20520.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG17562-RA	2..1672	1..1671	100		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:42:25 Download gff for RE20520.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG17562-RA	4..1674	1..1671	100		Plus

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:44:56 Download gff for RE20520.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG17562-RA	2..1672	1..1671	100		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:51:11 Download gff for RE20520.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG17562-RA	4..1674	1..1671	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:48:35 Download gff for RE20520.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	16615312..16615597	1..286	100	->	Plus
3R	16615654..16616164	287..797	100	->	Plus
3R	16616222..16616933	798..1509	100	->	Plus
3R	16616993..16617154	1510..1671	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:48:35 Download gff for RE20520.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	16615312..16615597	1..286	100	->	Plus
3R	16615654..16616164	287..797	100	->	Plus
3R	16616222..16616933	798..1509	100	->	Plus
3R	16616993..16617154	1510..1671	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:48:35 Download gff for RE20520.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	16615312..16615597	1..286	100	->	Plus
3R	16615654..16616164	287..797	100	->	Plus
3R	16616222..16616933	798..1509	100	->	Plus
3R	16616993..16617154	1510..1671	100		Plus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:42:25 Download gff for RE20520.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_3R	12441034..12441319	1..286	100	->	Plus
arm_3R	12441376..12441886	287..797	100	->	Plus
arm_3R	12441944..12442655	798..1509	100	->	Plus
arm_3R	12442715..12442876	1510..1671	100		Plus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:21:14 Download gff for RE20520.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	16356143..16356428	1..286	100	->	Plus
3R	16356485..16356995	287..797	100	->	Plus
3R	16357053..16357764	798..1509	100	->	Plus
3R	16357824..16357985	1510..1671	100		Plus

RE20520.pep Sequence

Translation from 97 to 1596

> RE20520.pep
MDTDIQRCFRSKTVFLTGATGFLGKVVIEKLLRTTEVKRIYVLIRPKRGV
EIKDRIITWSKDAVFELLLKSKPEALQRVCPIAGDCLDFDLGISENDRRL
LASEVQIVIHGAATVRFNEPLHVALAINTRATKLMIQLAKEMRQLEAFVH
VSTAFSNCVIYNIKENFYPEHLNCSSDKVLAMAELMSDELLDNMEQALLG
SFPNTYTYTKALAEDVILKEAGGLPLCIFRPAVIIAAHKEPISGWIDNMY
GPMAILFGVARGVLRIATIDHHAEASLVPVDYCANLTLACTWKTIVEGNE
MGTQETPLIYQLAPIEQNKITHGEFIRHALDGRTNCPLTKMIWYPFIHCI
TVPWLFPLAAFFYHTLPAYFFDLALWLSGRKPRLVKVYQKIHKTLGILGP
FACKSWRFDMRNTDHLRQQMSEEDRRIYYFDMVSLNWKEYFVQALRGMRQ
FLGNEAPTPESIAQGKKLIKRLKLLHHILQGVLCFVALLALWSLVRILV*

RE20520.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:13:36

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF17059-PA	501	GF17059-PA	1..499	1..499	1884	67.5	Plus
Dana\GF17064-PA	502	GF17064-PA	1..498	1..498	1600	59.4	Plus
Dana\GF17049-PA	499	GF17049-PA	1..497	1..499	1527	55.1	Plus
Dana\GF17061-PA	502	GF17061-PA	1..501	1..499	1493	54.6	Plus
Dana\GF17060-PA	502	GF17060-PA	1..500	1..498	1463	54.7	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:13:37

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG21720-PA	499	GG21720-PA	1..499	1..499	2365	86.4	Plus
Dere\GG21731-PA	499	GG21731-PA	1..499	1..499	1732	61.9	Plus
Dere\GG21742-PA	499	GG21742-PA	1..499	1..499	1679	60.7	Plus
Dere\GG17133-PA	502	GG17133-PA	1..498	1..499	1498	56.5	Plus
Dere\GG17132-PA	501	GG17132-PA	1..495	1..496	1347	50.2	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:13:38

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH20933-PA	500	GH20933-PA	1..496	1..494	1345	50	Plus
Dgri\GH20164-PA	515	GH20164-PA	8..514	2..498	1341	48.7	Plus
Dgri\GH23697-PA	519	GH23697-PA	30..517	2..498	1020	40.5	Plus
Dgri\GH23076-PA	673	GH23076-PA	166..641	4..487	892	37.5	Plus
Dgri\GH17190-PA	511	GH17190-PA	7..501	2..491	862	36.7	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:32

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
CG17562-PA	499	CG17562-PA	1..499	1..499	2611	100	Plus
CG17560-PA	499	CG17560-PA	1..499	1..499	1690	62.9	Plus
CG14893-PB	510	CG14893-PB	12..510	1..499	1673	62.1	Plus
CG10096-PD	502	CG10096-PD	1..498	1..499	1481	56.5	Plus
CG10096-PB	502	CG10096-PB	1..498	1..499	1481	56.5	Plus
CG13091-PB	523	CG13091-PB	1..501	1..498	1344	50.7	Plus
CG13091-PA	523	CG13091-PA	1..501	1..498	1344	50.7	Plus
CG10096-PC	451	CG10096-PC	1..447	52..499	1304	54.9	Plus
CG10096-PA	451	CG10096-PA	1..447	52..499	1304	54.9	Plus
CG10097-PC	501	CG10097-PC	1..498	1..499	1276	48.9	Plus
CG10097-PD	501	CG10097-PD	1..498	1..499	1276	48.9	Plus
CG10097-PB	501	CG10097-PB	1..498	1..499	1276	48.9	Plus
wat-PA	517	CG1443-PA	29..517	2..499	973	39.4	Plus
CG5065-PE	625	CG5065-PE	119..594	5..492	871	37.8	Plus
CG5065-PD	625	CG5065-PD	119..594	5..492	871	37.8	Plus
CG5065-PC	625	CG5065-PC	119..594	5..492	871	37.8	Plus
CG5065-PB	625	CG5065-PB	119..594	5..492	871	37.8	Plus
CG5065-PA	625	CG5065-PA	119..594	5..492	871	37.8	Plus
CG34342-PD	572	CG34342-PD	68..545	3..480	782	34	Plus
CG12268-PC	531	CG12268-PC	12..501	2..493	740	33.6	Plus
CG12268-PB	531	CG12268-PB	12..501	2..493	740	33.6	Plus
CG12268-PA	531	CG12268-PA	12..501	2..493	740	33.6	Plus
CG1441-PB	517	CG1441-PB	28..511	5..492	736	34	Plus
CG1441-PA	517	CG1441-PA	28..511	5..492	736	34	Plus
CG8306-PA	516	CG8306-PA	10..497	9..488	665	30.8	Plus
CG30427-PF	499	CG30427-PF	8..455	5..455	655	32.7	Plus
CG30427-PE	499	CG30427-PE	8..455	5..455	655	32.7	Plus
CG30427-PB	499	CG30427-PB	8..455	5..455	655	32.7	Plus
CG4020-PB	494	CG4020-PB	3..494	5..492	651	33	Plus
CG4020-PA	494	CG4020-PA	3..494	5..492	651	33	Plus
CG30427-PD	499	CG30427-PD	8..487	5..485	621	31.1	Plus
CG30427-PA	499	CG30427-PA	8..487	5..485	621	31.1	Plus
CG30427-PG	506	CG30427-PG	8..457	5..458	597	31.4	Plus
CG30427-PC	506	CG30427-PC	8..457	5..458	597	31.4	Plus
CG4770-PA	490	CG4770-PA	13..462	3..461	562	29.5	Plus
CG8303-PD	543	CG8303-PD	39..487	5..456	528	30	Plus
CG8303-PC	543	CG8303-PC	39..487	5..456	528	30	Plus
FarO-PA	504	CG18031-PA	8..496	4..492	501	26.8	Plus
CG34342-PE	322	CG34342-PE	68..312	3..252	437	37.2	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:13:38

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI24376-PA	508	GI24376-PA	1..507	1..498	1444	52.8	Plus
Dmoj\GI21289-PA	503	GI21289-PA	1..502	1..498	1399	51.8	Plus
Dmoj\GI24527-PA	521	GI24527-PA	30..517	2..498	1021	40.7	Plus
Dmoj\GI21145-PA	683	GI21145-PA	177..652	5..492	884	37.3	Plus
Dmoj\GI13956-PA	506	GI13956-PA	15..505	3..496	872	36.8	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:13:39

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL27190-PA	496	GL27190-PA	1..496	1..499	2038	74.5	Plus
Dper\GL27192-PA	502	GL27192-PA	1..499	1..499	1726	63.5	Plus
Dper\GL27193-PA	499	GL27193-PA	1..496	1..498	1709	63.5	Plus
Dper\GL27191-PA	500	GL27191-PA	1..499	1..499	1619	60.1	Plus
Dper\GL27181-PA	483	GL27181-PA	1..480	14..498	1517	56.7	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:13:40

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA26764-PA	498	GA26764-PA	1..498	1..499	2021	74.1	Plus
Dpse\GA13330-PA	502	GA13330-PA	1..487	1..487	1729	63.9	Plus
Dpse\GA26766-PA	499	GA26766-PA	1..496	1..498	1702	63.1	Plus
Dpse\GA26765-PA	500	GA26765-PA	1..499	1..499	1624	60.3	Plus
Dpse\GA26761-PA	921	GA26761-PA	451..918	26..498	1487	56.9	Plus
Dpse\GA26761-PA	921	GA26761-PA	1..445	1..441	1333	56	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:13:40

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM15172-PA	499	GM15172-PA	1..499	1..499	2618	97.8	Plus
Dsec\GM15173-PA	499	GM15173-PA	1..499	1..499	1751	62.3	Plus
Dsec\GM15174-PA	415	GM15174-PA	1..411	1..411	1447	63	Plus
Dsec\GM11053-PA	700	GM11053-PA	224..696	26..499	1379	55.9	Plus
Dsec\GM12273-PA	517	GM12273-PA	29..501	2..483	979	39.9	Plus
Dsec\GM11053-PA	700	GM11053-PA	1..227	1..237	715	57.8	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:13:41

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD19114-PA	499	GD19114-PA	1..499	1..499	2627	98	Plus
Dsim\GD19115-PA	499	GD19115-PA	1..499	1..499	1758	62.7	Plus
Dsim\GD19116-PA	499	GD19116-PA	1..499	1..499	1735	62.1	Plus
Dsim\GD20574-PA	502	GD20574-PA	1..498	1..499	1498	56.1	Plus
Dsim\GD23553-PA	523	GD23553-PA	1..497	1..498	1383	51.7	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:13:42

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ24383-PA	508	GJ24383-PA	1..506	5..499	1565	57.4	Plus
Dvir\GJ20375-PA	502	GJ20375-PA	1..496	1..492	1437	53.4	Plus
Dvir\GJ21444-PA	504	GJ21444-PA	1..500	1..494	1412	53.4	Plus
Dvir\GJ22672-PA	499	GJ22672-PA	1..493	1..492	1333	50.5	Plus
Dvir\GJ21443-PA	538	GJ21443-PA	1..482	1..480	1326	53.3	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:13:43

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK22328-PA	505	GK22328-PA	1..501	1..498	1554	57.5	Plus
Dwil\GK11197-PA	505	GK11197-PA	6..500	2..499	1459	53	Plus
Dwil\GK11196-PA	468	GK11196-PA	1..468	1..471	1411	54.1	Plus
Dwil\GK12983-PA	495	GK12983-PA	1..474	1..477	1327	51.9	Plus
Dwil\GK10887-PA	517	GK10887-PA	29..495	2..477	976	40	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:13:43

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE24581-PA	499	GE24581-PA	1..499	1..499	2556	95	Plus
Dyak\GE24582-PA	499	GE24582-PA	1..499	1..499	1748	61.7	Plus
Dyak\GE24583-PA	510	GE24583-PA	12..510	1..499	1723	61.1	Plus
Dyak\GE24525-PA	502	GE24525-PA	1..498	1..499	1514	55.9	Plus
Dyak\GE18784-PA	523	GE18784-PA	1..501	1..498	1401	52.3	Plus

RE20520.hyp Sequence

Translation from 97 to 1596

> RE20520.hyp
MDTDIQRCFRSKTVFLTGATGFLGKVVIEKLLRTTEVKRIYVLIRPKRGV
EIKDRIITWSKDAVFELLLKSKPEALQRVCPIAGDCLDFDLGISENDRRL
LASEVQIVIHGAATVRFNEPLHVALAINTRATKLMIQLAKEMRQLEAFVH
VSTAFSNCVIYNIKENFYPEHLNCSSDKVLAMAELMSDELLDNMEQALLG
SFPNTYTYTKALAEDVILKEAGGLPLCIFRPAVIIAAHKEPISGWIDNMY
GPMAILFGVARGVLRIATIDHHAEASLVPVDYCANLTLACTWKTIVEGNE
MGTQETPLIYQLAPIEQNKITHGEFIRHALDGRTNCPLTKMIWYPFIHCI
TVPWLFPLAAFFYHTLPAYFFDLALWLSGRKPRLVKVYQKIHKTLGILGP
FACKSWRFDMRNTDHLRQQMSEEDRRIYYFDMVSLNWKEYFVQALRGMRQ
FLGNEAPTPESIAQGKKLIKRLKLLHHILQGVLCFVALLALWSLVRILV*

RE20520.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:16:46

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
CG17562-PA	499	CG17562-PA	1..499	1..499	2611	100	Plus
CG17560-PA	499	CG17560-PA	1..499	1..499	1690	62.9	Plus
CG14893-PB	510	CG14893-PB	12..510	1..499	1673	62.1	Plus
CG10096-PD	502	CG10096-PD	1..498	1..499	1481	56.5	Plus
CG10096-PB	502	CG10096-PB	1..498	1..499	1481	56.5	Plus

Library:	RE
Tissue Source:	Drosophila melanogaster embryo
Created by:	Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:	2000-10-23
Comments:	Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:	205
Well:	20
Vector:	pFlc-1
Associated Gene/Transcript	CG17562-RA
Protein status:	RE20520.pep: gold
Preliminary Size:	1416
Sequenced Size:	1687

Clone RE20520 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

RE20520.complete Sequence

RE20520.complete Blast Records

RE20520.complete Sim4 Records

RE20520.pep Sequence

RE20520.pep Blast Records

RE20520.hyp Sequence

RE20520.hyp Blast Records