BDGP Sequence Production Resources |
Search the DGRC for RE20784
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 207 |
Well: | 84 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG15743-RA |
Protein status: | RE20784.pep: gold |
Preliminary Size: | 1068 |
Sequenced Size: | 1653 |
Gene | Date | Evidence |
---|---|---|
CG15743 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15743 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15743 | 2003-02-20 | Blastp of sequenced clone |
CG15743 | 2008-04-29 | Release 5.5 accounting |
CG15743 | 2008-08-15 | Release 5.9 accounting |
CG15743 | 2008-12-18 | 5.12 accounting |
1653 bp (1653 high quality bases) assembled on 2003-02-20
GenBank Submission: BT004861
> RE20784.complete GTTTTGGTTTTGTTTGGGGCTGTTTTTGGGGGAAAAAACGCGCAACGTGG ACGTGAAATTGAATAGATCGGCACCGAGCATAGCTCACCTGTGCTCCCCC CTCGCCACAAAGAGCAGAAAGAAACACCTGTGCCCCCGCCCCCGCCGTCC ACACCCACCGACGCGCCATCATCAAGTGTTTTTCGTTTCAGTTCTTGCGA GGGTTTTTTCAAGACAGCATCTGGGTTGATCTCAATGTGGTGATCTGGCA AATACGACAGCACACTGATACACGCATAGATAGAATAGAATAGAATATAG TATATAGTCTAGCATATAATAGATGAGCGAAGACAAGATGAACGGACGCT CCATTCGCATCAACCGGCTGCCGGCCACCATTGTGGCCATCCTGCTGACC TTTGTCCTGGTCTACTTCCTCAATTTCCATCAGGAGGAGCGGCCAGCGAT CTACGGCATGCTGCGCAGTGAGAATCCCAGCCGCGTCAATCTACGCAAGA TGCTAATAGCCGCCATACAGGCCGCCCAGCGTGGCGGTCTCGAGGTACTG GACGTGGCCCGGAGTCGCCAGCTGAAGGAGCGCAGCAAGGGCAAGACGGA CGAGGGCGTCAATGATCCCTTCACGGATGCCGACGGCCGGTCACATTGTG TGATGAAGCAGGGCCTGCAGCGAATCTTTCCCCGCGTACAAATCTTCTCC GAGGAGGACAAGGAGCACTGCAAGCAGGCACACGGCTATGATCTAGATCC AACGGTCCTCCACGAGACCGCACAGATACCGGATGTGACCGTAAATGCCC AGGATGTCACTGTTTGGGTAGATCCGTTGGATGCCACCAAGGAGTTCACC GAGGAGCTATACGAGTACGTGACCACCATGGTGTGCGTGGCAGTGGCCGG AAGGCCCATCATTGGCGTGATCCACAGCCCGTTCAATGGACAAACCGCGT GGGCGTGGGTGGGCAACTCGATGTCTGAGTACCTATCCAATCTGCATCCG CAGCATTCGCCAAACAATCAGGCGCCCATCATTACAGTCTCGCGATCCCA CACGGCAGGTGCCAAGGATCTGGCGAGGGGCATCTTTGGCGAGAATGTCA GCCTGCTGACGGCGGCGGGAGCTGGCTACAAGGTGCTCCAGGTGGTGGCC AACAATGCCACCGCCTATTTGCACACGTCGAAGATCAAGAAGTGGGACAT TTGCGCCGGCGATGCTATTCTGCACGCATTGGGCGGCACAATGACCACGC TGAACGATCAGTTGATTAACTACGGACCAGAGGAATCGCCAGTCAATACG GAGGGCCTGCTGGCCACCTTGGAGCAGCATGACGAGTACATGGACAAGCT GTCCAAATATCGCGAGGCGCACAATGGCAAGCTGGCGTAGGGTCTGGTCA GCTCCCCTACATTCTAACCCTTCCCGAGGAAATCCCCTCGCCCACATCGT TTAGGCAGCATTCAAAAATAGCTTTAAGTTAAAAGAAGGAAACCTGTTTT TCGTAATCTCAATGTTTGTTTGTGCGTGTGCTTCTTTTTTTTTGCATAAT TACGTTGGTTGTGCGGCGGCGCGGCGGGGTCATGAACCCGGACCAAACCA AACCGCCCAGTTGGCTCAAAATAAACTTATTTTAAACAAAAAAAAAAAAA AAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 13176844..13177691 | 1..851 | 99 | -> | Plus |
chrX | 13177768..13178554 | 852..1637 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15743-RA | 1..1068 | 323..1390 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15743-RA | 1..1068 | 323..1390 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15743-RA | 1..1068 | 323..1390 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15743-RA | 1..1068 | 323..1390 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15743-RA | 1..1068 | 323..1390 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15743-RA | 2..1636 | 3..1637 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15743-RA | 2..1636 | 3..1637 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15743-RA | 15..1650 | 1..1637 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15743-RA | 2..1636 | 3..1637 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15743-RA | 15..1650 | 1..1637 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13286030..13286879 | 1..851 | 99 | -> | Plus |
X | 13286956..13287741 | 852..1637 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13286030..13286879 | 1..851 | 99 | -> | Plus |
X | 13286956..13287741 | 852..1637 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13286030..13286879 | 1..851 | 99 | -> | Plus |
X | 13286956..13287741 | 852..1637 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 13180063..13180912 | 1..851 | 99 | -> | Plus |
arm_X | 13180989..13181774 | 852..1637 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13294128..13294977 | 1..851 | 99 | -> | Plus |
X | 13295054..13295839 | 852..1637 | 100 | Plus |
Translation from 322 to 1389
> RE20784.pep MSEDKMNGRSIRINRLPATIVAILLTFVLVYFLNFHQEERPAIYGMLRSE NPSRVNLRKMLIAAIQAAQRGGLEVLDVARSRQLKERSKGKTDEGVNDPF TDADGRSHCVMKQGLQRIFPRVQIFSEEDKEHCKQAHGYDLDPTVLHETA QIPDVTVNAQDVTVWVDPLDATKEFTEELYEYVTTMVCVAVAGRPIIGVI HSPFNGQTAWAWVGNSMSEYLSNLHPQHSPNNQAPIITVSRSHTAGAKDL ARGIFGENVSLLTAAGAGYKVLQVVANNATAYLHTSKIKKWDICAGDAIL HALGGTMTTLNDQLINYGPEESPVNTEGLLATLEQHDEYMDKLSKYREAH NGKLA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20869-PA | 352 | GF20869-PA | 1..352 | 6..355 | 1741 | 90.9 | Plus |
Dana\GF18667-PA | 304 | GF18667-PA | 6..304 | 57..353 | 371 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17765-PA | 355 | GG17765-PA | 1..355 | 1..355 | 1852 | 96.6 | Plus |
Dere\GG11697-PA | 306 | GG11697-PA | 8..295 | 57..343 | 357 | 33.1 | Plus |
Dere\GG19895-PA | 374 | GG19895-PA | 141..318 | 146..305 | 153 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12318-PA | 348 | GH12318-PA | 1..348 | 6..355 | 1515 | 79.7 | Plus |
Dgri\GH19967-PA | 306 | GH19967-PA | 8..295 | 57..343 | 364 | 32.4 | Plus |
Dgri\GH14420-PA | 374 | GH14420-PA | 141..324 | 152..314 | 170 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15743-PB | 355 | CG15743-PB | 1..355 | 1..355 | 1846 | 100 | Plus |
CG15743-PC | 355 | CG15743-PC | 1..355 | 1..355 | 1846 | 100 | Plus |
CG15743-PA | 355 | CG15743-PA | 1..355 | 1..355 | 1846 | 100 | Plus |
CG7789-PA | 306 | CG7789-PA | 8..295 | 57..343 | 360 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21462-PA | 348 | GI21462-PA | 1..347 | 6..354 | 1497 | 78.8 | Plus |
Dmoj\GI22044-PA | 308 | GI22044-PA | 8..295 | 57..343 | 372 | 32.8 | Plus |
Dmoj\GI10045-PA | 372 | GI10045-PA | 141..371 | 152..345 | 163 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13412-PA | 210 | GL13412-PA | 8..210 | 2..204 | 992 | 89.2 | Plus |
Dper\GL13413-PA | 139 | GL13413-PA | 1..138 | 217..354 | 641 | 87 | Plus |
Dper\GL23516-PA | 305 | GL23516-PA | 8..302 | 57..349 | 371 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13929-PA | 350 | GA13929-PA | 1..349 | 6..354 | 1727 | 90.3 | Plus |
Dpse\GA20589-PA | 305 | GA20589-PA | 8..302 | 57..349 | 374 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11612-PA | 355 | GM11612-PA | 1..355 | 1..355 | 1895 | 98.6 | Plus |
Dsec\GM12826-PA | 306 | GM12826-PA | 8..295 | 57..343 | 358 | 33.1 | Plus |
Dsec\GM24144-PA | 373 | GM24144-PA | 103..317 | 126..305 | 155 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17111-PA | 569 | GD17111-PA | 1..177 | 1..177 | 931 | 97.2 | Plus |
Dsim\GD21468-PA | 167 | GD21468-PA | 8..167 | 57..211 | 204 | 32.1 | Plus |
Dsim\GD21469-PA | 138 | GD21469-PA | 19..127 | 236..343 | 174 | 39.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16483-PA | 348 | GJ16483-PA | 1..347 | 6..354 | 1573 | 81.9 | Plus |
Dvir\GJ24097-PA | 306 | GJ24097-PA | 8..295 | 57..343 | 360 | 31.8 | Plus |
Dvir\GJ22570-PA | 376 | GJ22570-PA | 148..341 | 157..322 | 156 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25305-PA | 349 | GK25305-PA | 1..347 | 6..353 | 1628 | 86 | Plus |
Dwil\GK11929-PA | 313 | GK11929-PA | 10..302 | 57..343 | 333 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17055-PA | 355 | GE17055-PA | 1..355 | 1..355 | 1896 | 98.9 | Plus |
Dyak\GE23887-PA | 306 | GE23887-PA | 8..295 | 57..343 | 361 | 33.4 | Plus |
Dyak\GE26306-PA | 488 | GE26306-PA | 255..432 | 146..305 | 152 | 29.9 | Plus |
Translation from 322 to 1389
> RE20784.hyp MSEDKMNGRSIRINRLPATIVAILLTFVLVYFLNFHQEERPAIYGMLRSE NPSRVNLRKMLIAAIQAAQRGGLEVLDVARSRQLKERSKGKTDEGVNDPF TDADGRSHCVMKQGLQRIFPRVQIFSEEDKEHCKQAHGYDLDPTVLHETA QIPDVTVNAQDVTVWVDPLDATKEFTEELYEYVTTMVCVAVAGRPIIGVI HSPFNGQTAWAWVGNSMSEYLSNLHPQHSPNNQAPIITVSRSHTAGAKDL ARGIFGENVSLLTAAGAGYKVLQVVANNATAYLHTSKIKKWDICAGDAIL HALGGTMTTLNDQLINYGPEESPVNTEGLLATLEQHDEYMDKLSKYREAH NGKLA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15743-PB | 355 | CG15743-PB | 1..355 | 1..355 | 1846 | 100 | Plus |
CG15743-PC | 355 | CG15743-PC | 1..355 | 1..355 | 1846 | 100 | Plus |
CG15743-PA | 355 | CG15743-PA | 1..355 | 1..355 | 1846 | 100 | Plus |
CG7789-PA | 306 | CG7789-PA | 8..295 | 57..343 | 360 | 33.1 | Plus |