BDGP Sequence Production Resources |
Search the DGRC for RE20991
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 209 |
Well: | 91 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14879-RB |
Protein status: | RE20991.pep: gold |
Preliminary Size: | 540 |
Sequenced Size: | 1762 |
Gene | Date | Evidence |
---|---|---|
CG14879 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14879 | 2002-01-03 | Blastp of sequenced clone |
CG14879 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14879 | 2008-04-29 | Release 5.5 accounting |
CG14879 | 2008-08-15 | Release 5.9 accounting |
CG14879 | 2008-12-18 | 5.12 accounting |
1762 bp (1762 high quality bases) assembled on 2002-01-03
GenBank Submission: AY084129
> RE20991.complete AGTTTTCAATCACGCGCGAATGCGAACGGAACTGCGCGTCGTGGAATTAT TTAAATTAGTTAAAGCTAAGCAAATATGCTCGACTGCACGTTGCCCGTGA CGTAGTCTTGGACTTAATCCTCTTCCAGTCCCTTAATATAGCACCGTATC TGTGTAATCGCCAACAGTATTGACCAAGTCGTCCAAGTGCTCACTACTCC CTCGGCTATTTGGAGTTATTGTAACCGTTGGCAACTGCCACAGCAAACGT ATTTACAATTATCCGGATAAAATTTGCAATTACACACCTTGCTAAAAATA AAACGGAAAAGAAGCAGCCCATTATAATAAATCGTTTAAAATGCCTGATG TGAAGTTCTTTGCCGTGCTGCCCACCAATGCCAGTACCTCGGATCGAGTA ACCCGGCTGTCCATCAGCGGCAACCTGCTCCAGGATCCCCAGCAATTCTC GGTGAACTTTGTCAACAGTCCGGACTGCACGGACAACATCACATACCACT TCAAGGTGGTGATTCCCACACAGACGATTATCGAGAATTATAAGCGGAAC GGCGAGTGGAGCAGCCTGCACCAGGAGAAGTACCTGAACATCTTCGACGA GTCCTCCTTTTGCCTTGAGTTCGCCTTCGACTACGCAAATTCAATGATGC GGGTGTACCAGGGTAGGGATTCGGGCCACAATTTCATAACCGAGTACGAG ACTCTCTTCTCCCTGTCCGACATCCAGGCTGTACAGGTGTGGGGCGATGT ACAGAAGGTCAACCAGTTTGCCCTAAGCTACAACTGATCGGGAGAAGAAT CCCAAAGATCCCATGATCCCCAAGGTAGCCCGCAATGTTCTCTTATTTAA TGCATTCTTTCTTCAATCGCATAGATTCAAGTTCGGTGGCGGGCGTCCTT AGTCCTAACACCGCACGACCTTAATCCCCTCACCTGTAGTTTTAATTAGT TTGTTGGATTCCGCACCCATCTAAATCACTTCGCTGCAGTAGCAACACGC TTTCACTCCTTCGCTTGTTAATGCGTTGAGTATCATTATAATTTGACTAC AAGTTCTTGTTGATCGTGGGCTTAAGAAACATTTTCCCATCAAGATGATT GTGGTTTTTTAACAGTATTAAACCAATATTTATTTATTTGCAAAAATCTC AAAAATTTAATTGAAACACCTGTTTTCTTTACGTTCTATGTTAAATTGTT TAAAATTTTAAAAGTACTCAAAATTTTAATTGGCATTTGAATAGGTTTTA TGCCCCATTTCTTGCAACATAAGGCAATATCATTTTCAATAGTATTGCTG GATTGCAGCGTTTTCCACTTATATCTTTATGATGCCGTAAGAGTTTGATA ATATTCCATTGTTTGATAAACCAAATCAGCATTAACAAACACACATTCAC GGACTACATACATACATATATATGTCAGTCACATATCACTCACCTCGGTG CTATCTGTCTTATGACGTCACTTTAGCTCTGCTATGTCCTATTGCTATCC TTTGCAGTTGCTAATTGTTTCTTTGTTTGTAGTTGATAGCAAACGTATTT GTAAGGCCAAAGAATTTTATGTATAATACACCTTGAGTTTCTGTTTCGCG CTTGCTAAAGTCTTCCATTCAGATTGTAAACCTACAATGTAAGTGTTAGC TTTACCTGTAATACCTACATACATATGTATACAGACCACGCCAAGTATTA AAAATCGCATGACAAGTGCGTTTTCCACAAATTAAATGCGTAAACACAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 12170828..12171976 | 1747..599 | 5730 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 12173476..12173920 | 444..1 | 2160 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 12172069..12172223 | 599..445 | 775 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 16346130..16347281 | 1750..599 | 5760 | 100 | Minus |
3R | 32079331 | 3R | 16348781..16349224 | 444..1 | 2220 | 100 | Minus |
3R | 32079331 | 3R | 16347374..16347528 | 599..445 | 775 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 16086961..16088112 | 1750..599 | 5760 | 100 | Minus |
3R | 31820162 | 3R | 16089612..16090055 | 444..1 | 2220 | 100 | Minus |
3R | 31820162 | 3R | 16088205..16088359 | 599..445 | 775 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
blood | 7410 | blood BLOOD 7410bp | 6835..6999 | 1030..1195 | 133 | 57.4 | Plus |
Dhet\Uhu | 1658 | Dhet\Uhu DHUHUH3 1658bp AKA(S51651) Derived from X63028 (Rel. 36, Last updated, Version 7). | 1574..1626 | 1508..1557 | 114 | 74.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 12170828..12171975 | 600..1747 | 99 | <- | Minus |
chr3R | 12172069..12172223 | 445..599 | 100 | <- | Minus |
chr3R | 12173476..12173920 | 1..444 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14879-RB | 1..447 | 341..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14879-RB | 1..447 | 341..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14879-RB | 1..447 | 341..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14879-RB | 1..447 | 341..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14879-RB | 1..447 | 341..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14879-RB | 1..1747 | 1..1747 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14879-RB | 1..1747 | 1..1747 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14879-RB | 3..1749 | 1..1747 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14879-RB | 1..1747 | 1..1747 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14879-RB | 3..1749 | 1..1747 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16346133..16347280 | 600..1747 | 100 | <- | Minus |
3R | 16347374..16347528 | 445..599 | 100 | <- | Minus |
3R | 16348781..16349224 | 1..444 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16346133..16347280 | 600..1747 | 100 | <- | Minus |
3R | 16347374..16347528 | 445..599 | 100 | <- | Minus |
3R | 16348781..16349224 | 1..444 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16346133..16347280 | 600..1747 | 100 | <- | Minus |
3R | 16347374..16347528 | 445..599 | 100 | <- | Minus |
3R | 16348781..16349224 | 1..444 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 12171855..12173002 | 600..1747 | 100 | <- | Minus |
arm_3R | 12173096..12173250 | 445..599 | 100 | <- | Minus |
arm_3R | 12174503..12174946 | 1..444 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16089612..16090055 | 1..444 | 100 | Minus | |
3R | 16086964..16088111 | 600..1747 | 100 | <- | Minus |
3R | 16088205..16088359 | 445..599 | 100 | <- | Minus |
Translation from 340 to 786
> RE20991.pep MPDVKFFAVLPTNASTSDRVTRLSISGNLLQDPQQFSVNFVNSPDCTDNI TYHFKVVIPTQTIIENYKRNGEWSSLHQEKYLNIFDESSFCLEFAFDYAN SMMRVYQGRDSGHNFITEYETLFSLSDIQAVQVWGDVQKVNQFALSYN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16524-PA | 148 | GF16524-PA | 1..148 | 1..148 | 657 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20048-PA | 148 | GG20048-PA | 1..148 | 1..148 | 752 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18076-PA | 146 | GH18076-PA | 1..146 | 1..148 | 558 | 68.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14879-PB | 148 | CG14879-PB | 1..148 | 1..148 | 781 | 100 | Plus |
CG14879-PD | 179 | CG14879-PD | 1..179 | 1..148 | 739 | 82.7 | Plus |
CG14879-PC | 179 | CG14879-PC | 1..179 | 1..148 | 739 | 82.7 | Plus |
CG14879-PA | 179 | CG14879-PA | 1..179 | 1..148 | 739 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24649-PA | 148 | GI24649-PA | 1..148 | 1..148 | 582 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22248-PA | 146 | GL22248-PA | 1..146 | 1..148 | 627 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13315-PA | 146 | GA13315-PA | 1..146 | 1..148 | 627 | 80.4 | Plus |
Dpse\GA13315-PB | 175 | GA13315-PB | 1..175 | 1..148 | 591 | 67.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15443-PA | 148 | GM15443-PA | 1..148 | 1..148 | 791 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20298-PA | 148 | GD20298-PA | 1..148 | 1..148 | 791 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23503-PA | 148 | GJ23503-PA | 1..148 | 1..148 | 586 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13510-PA | 148 | GK13510-PA | 1..148 | 1..148 | 544 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26322-PA | 148 | GE26322-PA | 1..148 | 1..148 | 781 | 98 | Plus |
Translation from 340 to 786
> RE20991.hyp MPDVKFFAVLPTNASTSDRVTRLSISGNLLQDPQQFSVNFVNSPDCTDNI TYHFKVVIPTQTIIENYKRNGEWSSLHQEKYLNIFDESSFCLEFAFDYAN SMMRVYQGRDSGHNFITEYETLFSLSDIQAVQVWGDVQKVNQFALSYN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14879-PB | 148 | CG14879-PB | 1..148 | 1..148 | 781 | 100 | Plus |
CG14879-PD | 179 | CG14879-PD | 1..179 | 1..148 | 739 | 82.7 | Plus |
CG14879-PC | 179 | CG14879-PC | 1..179 | 1..148 | 739 | 82.7 | Plus |
CG14879-PA | 179 | CG14879-PA | 1..179 | 1..148 | 739 | 82.7 | Plus |