Clone RE21078 Report

Search the DGRC for RE21078

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:210
Well:78
Vector:pFlc-1
Associated Gene/Transcriptpes-RC
Protein status:RE21078.pep: gold
Preliminary Size:1660
Sequenced Size:2929

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7228 2002-01-01 Sim4 clustering to Release 2
CG7228 2002-02-22 Blastp of sequenced clone
CG7228 2003-01-01 Sim4 clustering to Release 3
pes 2008-04-29 Release 5.5 accounting
pes 2008-08-15 Release 5.9 accounting
pes 2008-12-18 5.12 accounting

Clone Sequence Records

RE21078.complete Sequence

2929 bp (2929 high quality bases) assembled on 2002-02-22

GenBank Submission: AY084131

> RE21078.complete
AGTGGCAGGCGCAGCGCCGCTCTGACACGTTCGCTCTTGATCGCGCGCGT
AAGTTCGAGATCAACAATTAACGGTGCGTAGCCGCCTCCTGAAACCCTGC
AAGTGGAAGCGAGACGGCCAATGGCAAGAAATAGACGCGTGCTGTGGAAG
CAAAAACAACACAAAAGCAGCGGAGAAACGATCACAGATTTAAACAATAT
TTATACTGTCGCGTCGCTGCAATTGAAATTGATTTCAATTTAAAAGTATT
TGAAGAAAAATTAGACACGTGCCGTGAAGTGCAAATGGAAAAAGTGTTAG
AAAAGCGAATGAATTAGTAAACAACGTCAACTGCAAGGAAAAACGCCAAT
AACGGGAACGCAGTCGATGCGAGGGTTCCATGCTCAGTGCGCAACAAGAG
ATCGATCGAGGAAGACGCCCTGCAAACAAAGAACATCAATTTACAGCACC
GCCACCAAGACTCAGGCGCAGCTCCACCAAGATGACATCACGGACGCGCC
ACTGTGCCCGACTGGGGATCGTTCTCCTTGGGATCTGTTGCATCGCCAGC
GGAATTTACCTCTTCCGCAACTGGATCGATATGTTTACACGCATGCGCGG
CCAGGAAATGGCCCTGAGCCCCAATTCACGATCATTCGAGGGCTGGAAGG
TGTCGCCGCTGCCTTTAGACTTCGATATATATCTATTTAACTGGACCAAT
CCAGATGACTTCTATGTGGGATCGAACAAGAAGCCACACTTTGAGCAACT
GGGACCCTATCGGTTTCGAGAGAAACCCGATAAGGTGGACATCGAATGGC
ACAATCATAACGCCTCCGTATCATTTCACAAAAAGTCCTGGTTCTACTTT
GATGCTGCCGGCAGCAACGGAAGTTTATGGGATAAAGTGACTACGGTCAA
CAGCGTAGCGCACTCTGCTGCTAGACGTGCGGCCGTCGACTGGTTTGCCA
GAACTGGCGTTAACATTGCCAATAAATTATATAGACAGGGAGTGACCATT
ACGAAAACAGTTGATGAAATGCTTTTCAAGGGCTACGAGCATCCATTCAT
AAGCGTGGGCAAGCTGTTGAGACCTCAGGATGTTCCCTACAAACGTATAG
GCTACCATTACCCACGAAATGGCAGTTCCGAGTTCGATGGTGATATCAAC
ATGTTTACAGGAGCTGATGATATCGCTAAAATGGGTCAGATTCATACGTG
GAATAATTTGACGCATACTGGAGCCTTTGAGGGCACCTGCGGGCAGGTGC
ACGGCTCGATGGGCGAATTCTTTCCGCCCAATCTTGGCACCAAAGACACC
GTCTACATGTACATGCCCAAGATGTGTCGTGCTATACCATTGGACTACGT
GGAAACTGTGACCGTGCACGGCGTGACCGCCTACAAATTCAGTGGCACCC
GGCACGCTGTGGACAATGGCACTCTATATCCGGATACCCGTTGCTATTGT
GTCGGAGGAAAGTGTATGCCCAGCGGTGTGATCAATATCGGACCCTGCTC
CTTTAACGCATCCGTCTACATGTCCTTTCCGCACTTTTACATGGCGGATC
CAAGCTATCTGGAGGCCATCGAGGGTTTGCGACCAGAACGCGAGAAGCAC
GAGTTCTTCATGGCCCTGGAGCCCAATGCGGGCGTGCCAATGGACGTGGG
TGGTGGCTTTCAGGCCAACTACTACATGGAGCCAATTCCGGGTATTACCT
TGTATGAGAATGTCCCGACGGTCATGATACCCATGATGTGGTGCGAGGAG
CGCGTACGCGTATCAGAGGAAATTGCCGCAGACATTGCGCTTGTTCCGCT
AATTGTCCTGCTGGGGCAGATAGTAACCGGCATCCTTTTGGCGGGCGGTC
TTATATGCACCTGCTGGTACCCGACGCGACAAGTGACGCACTTTTGTCAC
AGCGATCCAAAGGCGAAGGCCAGTGTCCTGCGACCACTGAACGCCTTTGG
TGTAAATTCGTCGGCAGCCACAGCGCCGGTGGCCCAACTATTCCGGAACA
ACATTAGTTCATCGGGCAACGAGCGTGTGGGAGTGCGCCTACTGGATTAT
AATCGCGATTCTGGCATAAGACTGGAGAGTGGTACCATGGAAAGCTCGCA
CAGGGAGCGTCTGATCAGCGAGGACTCGCCCGATGTTGTAGTTAGATAAT
ACATGCGTTGGCATCAAGCCATTCTGACGGTGCCGCCAACGATCATCTGC
CTGAGACTCATTTACGTCGCCGTAGCTTAGAATAGCTTAGAACAACGTGA
TGAAACCATTCTGCCTTAGCCAGGCTCTAAGAGGCTGGACCAAGTTGCTC
ATCGAGGATGTCGTTCCAATTCACGTCACATACCACCACATTACCTACCA
CGCATGCCCCAATCGCATTAGGAGTTCCCTCAACACATCTGCACGCTTTG
CGGACAGCGAGAGAGATTTATAAGATTATTTATTTTAGTGCCAAATAACA
GCAGAAAACGCAAGCAAAAAGTCATTAACTATTTTAGTAGGATAAACTAA
ATTGTATATAGAGCGACTCGCTTAGAGTGCCCCATTACTCATTTTCCTTA
ATTCTTGAAGTTTAAACTGCGCATGCCCAAAGTATTTATATTTATATAAT
AATGCATAACATTTGTAGAGCGATATTTAAGATTTTAATGCAGATTGATC
TGAAGTTATATAGAAATAATATTGAACAGAGAACATAGGTAGCGAGAATT
GTTGCTCATTTACATAGGTAGGCCGAAAAACTAAAAATTATAGTTGTTGT
TTTAAGTCTTGTACAAATAACGCTAGCACTGCAAAGATTACGCATATCCT
ATGTACAAATGTCGATCAGTGTAAGATCTAAATACCTAGATTATAAAGCA
CAGCTGTGAACCCCGGAAATATTTCCAAAAATTCCTTAAGATAAATGAAT
AGAAAAAATTATTAAAAAAAAAAAAAAAA

RE21078.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:56:20
Subject Length Description Subject Range Query Range Score Percent Strand
pes-RC 3368 pes-RC 127..3043 1..2917 14525 99.8 Plus
pes.f 3076 pes.f 177..2751 343..2917 12845 99.9 Plus
pes-RD 2824 pes-RD 177..2751 343..2917 12845 99.9 Plus
pes.f 3076 pes.f 104..176 1..73 350 98.6 Plus
pes-RD 2824 pes-RD 104..176 1..73 350 98.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:56:21
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 7986159..7987373 2913..1699 6030 99.8 Minus
chr2L 23010047 chr2L 7987439..7988223 1698..914 3880 99.6 Minus
chr2L 23010047 chr2L 7992887..7993228 342..1 1680 99.4 Minus
chr2L 23010047 chr2L 7988287..7988597 913..603 1555 100 Minus
chr2L 23010047 chr2L 7990412..7990674 605..343 1315 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:41:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:56:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7987109..7988327 2917..1699 6080 99.9 Minus
2L 23513712 2L 7988393..7989177 1698..914 3910 99.9 Minus
2L 23513712 2L 7993841..7994182 342..1 1680 99.4 Minus
2L 23513712 2L 7989243..7989553 913..603 1555 100 Minus
2L 23513712 2L 7991357..7991619 605..343 1315 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:15:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7987109..7988327 2917..1699 6080 99.9 Minus
2L 23513712 2L 7988393..7989177 1698..914 3910 99.8 Minus
2L 23513712 2L 7993841..7994182 342..1 1680 99.4 Minus
2L 23513712 2L 7989243..7989553 913..603 1555 100 Minus
2L 23513712 2L 7991357..7991619 605..343 1315 100 Minus
Blast to na_te.dros performed 2019-03-16 18:56:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsil\Loa 7779 Dsil\Loa DSV28T24 7779bp AKA(S39346) Derived from X60177 (Rel. 37, Last updated, Version 8). 324..390 2581..2647 119 64.2 Plus

RE21078.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:57:07 Download gff for RE21078.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 7986159..7987373 1699..2913 98 <- Minus
chr2L 7987439..7988223 914..1698 99 <- Minus
chr2L 7988287..7988595 605..913 100 <- Minus
chr2L 7990413..7990674 343..604 100 <- Minus
chr2L 7992887..7993228 1..342 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:01:26 Download gff for RE21078.complete
Subject Subject Range Query Range Percent Splice Strand
pes-RD 1..1668 482..2149 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:54:25 Download gff for RE21078.complete
Subject Subject Range Query Range Percent Splice Strand
pes-RD 1..1668 482..2149 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:19:46 Download gff for RE21078.complete
Subject Subject Range Query Range Percent Splice Strand
pes-RC 1..1668 482..2149 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:36:56 Download gff for RE21078.complete
Subject Subject Range Query Range Percent Splice Strand
pes-RB 1..1770 380..2149 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:55:52 Download gff for RE21078.complete
Subject Subject Range Query Range Percent Splice Strand
pes-RG 1..1668 482..2149 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:07:15 Download gff for RE21078.complete
Subject Subject Range Query Range Percent Splice Strand
pes-RC 1..2913 1..2913 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:54:25 Download gff for RE21078.complete
Subject Subject Range Query Range Percent Splice Strand
pes-RC 1..2913 1..2913 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:19:46 Download gff for RE21078.complete
Subject Subject Range Query Range Percent Splice Strand
pes-RC 3..2915 1..2913 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:36:56 Download gff for RE21078.complete
Subject Subject Range Query Range Percent Splice Strand
pes-RA 1..2913 1..2913 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:55:52 Download gff for RE21078.complete
Subject Subject Range Query Range Percent Splice Strand
pes-RC 3..2915 1..2913 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:57:07 Download gff for RE21078.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7987113..7988327 1699..2913 99 <- Minus
2L 7988393..7989177 914..1698 99 <- Minus
2L 7989243..7989551 605..913 100 <- Minus
2L 7991358..7991619 343..604 100 <- Minus
2L 7993841..7994182 1..342 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:57:07 Download gff for RE21078.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7987113..7988327 1699..2913 99 <- Minus
2L 7988393..7989177 914..1698 99 <- Minus
2L 7989243..7989551 605..913 100 <- Minus
2L 7991358..7991619 343..604 100 <- Minus
2L 7993841..7994182 1..342 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:57:07 Download gff for RE21078.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7987113..7988327 1699..2913 99 <- Minus
2L 7988393..7989177 914..1698 99 <- Minus
2L 7989243..7989551 605..913 100 <- Minus
2L 7991358..7991619 343..604 100 <- Minus
2L 7993841..7994182 1..342 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:19:46 Download gff for RE21078.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7991358..7991619 343..604 100 <- Minus
arm_2L 7987113..7988327 1699..2913 99 <- Minus
arm_2L 7988393..7989177 914..1698 99 <- Minus
arm_2L 7989243..7989551 605..913 100 <- Minus
arm_2L 7993841..7994182 1..342 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:19:40 Download gff for RE21078.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7993841..7994182 1..342 99   Minus
2L 7987113..7988327 1699..2913 99 <- Minus
2L 7988393..7989177 914..1698 99 <- Minus
2L 7989243..7989551 605..913 100 <- Minus
2L 7991358..7991619 343..604 100 <- Minus

RE21078.pep Sequence

Translation from 379 to 2148

> RE21078.pep
MLSAQQEIDRGRRPANKEHQFTAPPPRLRRSSTKMTSRTRHCARLGIVLL
GICCIASGIYLFRNWIDMFTRMRGQEMALSPNSRSFEGWKVSPLPLDFDI
YLFNWTNPDDFYVGSNKKPHFEQLGPYRFREKPDKVDIEWHNHNASVSFH
KKSWFYFDAAGSNGSLWDKVTTVNSVAHSAARRAAVDWFARTGVNIANKL
YRQGVTITKTVDEMLFKGYEHPFISVGKLLRPQDVPYKRIGYHYPRNGSS
EFDGDINMFTGADDIAKMGQIHTWNNLTHTGAFEGTCGQVHGSMGEFFPP
NLGTKDTVYMYMPKMCRAIPLDYVETVTVHGVTAYKFSGTRHAVDNGTLY
PDTRCYCVGGKCMPSGVINIGPCSFNASVYMSFPHFYMADPSYLEAIEGL
RPEREKHEFFMALEPNAGVPMDVGGGFQANYYMEPIPGITLYENVPTVMI
PMMWCEERVRVSEEIAADIALVPLIVLLGQIVTGILLAGGLICTCWYPTR
QVTHFCHSDPKAKASVLRPLNAFGVNSSAATAPVAQLFRNNISSSGNERV
GVRLLDYNRDSGIRLESGTMESSHRERLISEDSPDVVVR*

RE21078.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:06:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23406-PA 557 GF23406-PA 1..553 35..587 2486 81.2 Plus
Dana\GF14024-PA 529 GF14024-PA 3..449 65..508 1199 47.6 Plus
Dana\GF24773-PA 494 GF24773-PA 12..474 44..494 731 33.5 Plus
Dana\GF23403-PA 519 GF23403-PA 15..446 48..480 711 34.5 Plus
Dana\GF14812-PA 513 GF14812-PA 19..465 51..493 596 31 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:06:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23490-PA 555 GG23490-PA 1..555 35..589 2732 89.4 Plus
Dere\GG23532-PA 556 GG23532-PA 9..474 44..506 1166 46.3 Plus
Dere\GG24648-PA 491 GG24648-PA 45..460 77..488 726 35.1 Plus
Dere\GG23489-PA 518 GG23489-PA 40..468 77..502 719 33.9 Plus
Dere\GG21104-PA 513 GG21104-PA 12..494 44..509 601 29 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:06:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13076-PA 559 GH13076-PA 1..557 35..587 2125 69.4 Plus
Dgri\GH13144-PA 532 GH13144-PA 3..449 65..508 1159 46.8 Plus
Dgri\GH13075-PA 522 GH13075-PA 12..473 49..505 752 33.5 Plus
Dgri\GH10516-PA 499 GH10516-PA 26..442 58..471 730 35.1 Plus
Dgri\GH11638-PA 499 GH11638-PA 12..498 44..527 614 31.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:20
Subject Length Description Subject Range Query Range Score Percent Strand
pes-PF 555 CG7228-PF 1..555 35..589 3004 100 Plus
pes-PH 555 CG7228-PH 1..555 35..589 3004 100 Plus
pes-PG 555 CG7228-PG 1..555 35..589 3004 100 Plus
pes-PD 555 CG7228-PD 1..555 35..589 3004 100 Plus
pes-PC 555 CG7228-PC 1..555 35..589 3004 100 Plus
santa-maria-PC 563 CG12789-PC 16..483 44..508 1177 45.9 Plus
santa-maria-PA 563 CG12789-PA 16..483 44..508 1177 45.9 Plus
crq-PC 491 CG4280-PC 18..443 50..471 731 35.1 Plus
crq-PE 491 CG4280-PE 18..443 50..471 731 35.1 Plus
crq-PD 491 CG4280-PD 18..443 50..471 731 35.1 Plus
crq-PB 491 CG4280-PB 18..443 50..471 731 35.1 Plus
crq-PA 491 CG4280-PA 18..443 50..471 731 35.1 Plus
CG7227-PC 518 CG7227-PC 40..468 77..502 700 32.9 Plus
CG7227-PB 518 CG7227-PB 40..468 77..502 700 32.9 Plus
CG7227-PA 518 CG7227-PA 40..468 77..502 700 32.9 Plus
ninaD-PA 513 CG31783-PA 18..482 50..497 585 29.6 Plus
CG31741-PA 491 CG31741-PA 12..470 44..487 580 30.9 Plus
ninaD-PB 415 CG31783-PB 18..410 50..435 541 30.8 Plus
emp-PE 508 CG2727-PE 12..462 48..487 484 27.5 Plus
emp-PD 520 CG2727-PD 24..474 48..487 484 27.5 Plus
emp-PA 520 CG2727-PA 24..474 48..487 484 27.5 Plus
emp-PC 520 CG2727-PC 24..474 48..487 484 27.5 Plus
emp-PB 551 CG2727-PB 55..505 48..487 484 27.5 Plus
dsb-PD 615 CG1887-PD 79..603 44..587 477 26.4 Plus
dsb-PF 517 CG1887-PF 3..505 65..587 455 26.2 Plus
Snmp1-PB 551 CG7000-PB 34..461 72..486 373 24.5 Plus
Snmp1-PA 551 CG7000-PA 34..461 72..486 373 24.5 Plus
CG3829-PB 597 CG3829-PB 87..498 45..456 363 26.9 Plus
CG3829-PA 597 CG3829-PA 87..498 45..456 363 26.9 Plus
Snmp2-PB 510 CG7422-PB 11..462 50..467 354 24.2 Plus
CG10345-PA 552 CG10345-PA 44..494 76..499 354 21.7 Plus
CG40006-PA 689 CG40006-PA 121..541 76..492 318 23 Plus
Snmp2-PD 556 CG7422-PD 295..508 264..467 272 26.9 Plus
Snmp2-PC 556 CG7422-PC 295..508 264..467 272 26.9 Plus
pes-PE 87 CG7228-PE 1..50 35..84 232 90 Plus
CG2736-PA 507 CG2736-PA 10..421 47..456 197 21.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:06:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17695-PA 559 GI17695-PA 1..558 35..588 2118 68.7 Plus
Dmoj\GI17783-PA 566 GI17783-PA 10..483 38..508 1183 47.8 Plus
Dmoj\GI17694-PA 520 GI17694-PA 12..467 49..502 746 34.5 Plus
Dmoj\GI18033-PA 490 GI18033-PA 26..442 58..471 721 35.1 Plus
Dmoj\GI17938-PA 508 GI17938-PA 18..482 50..497 637 31 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:06:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18893-PA 558 GL18893-PA 1..558 35..589 2444 78.5 Plus
Dper\GL25933-PA 372 GL25933-PA 17..287 235..506 786 47.8 Plus
Dper\GL18892-PA 515 GL18892-PA 15..468 48..502 711 33 Plus
Dper\GL19261-PA 473 GL19261-PA 18..443 50..489 641 33 Plus
Dper\GL14664-PA 509 GL14664-PA 43..468 75..492 591 30.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:06:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20196-PA 558 GA20196-PA 1..558 35..589 2448 78.7 Plus
Dpse\GA25196-PA 566 GA25196-PA 4..481 30..506 1195 45.6 Plus
Dpse\GA20195-PA 515 GA20195-PA 15..468 48..502 705 33 Plus
Dpse\GA18078-PA 489 GA18078-PA 18..459 50..489 700 34.4 Plus
Dpse\GA16473-PA 509 GA16473-PA 43..468 75..492 583 30.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:06:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13246-PA 555 GM13246-PA 1..555 35..589 2821 92.8 Plus
Dsec\GM13558-PA 556 GM13558-PA 9..476 44..508 1141 45 Plus
Dsec\GM13235-PA 509 GM13235-PA 34..459 71..502 673 32.4 Plus
Dsec\GM17262-PA 513 GM17262-PA 12..468 44..492 574 29.1 Plus
Dsec\GM16668-PA 357 GM16668-PA 40..326 207..488 537 36.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:06:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11979-PA 227 GD11979-PA 1..227 363..589 1159 95.6 Plus
Dsim\GD22494-PA 556 GD22494-PA 9..476 44..508 1146 45.2 Plus
Dsim\crq-PA 491 GD22957-PA 12..460 44..488 728 34.2 Plus
Dsim\GD22452-PA 518 GD22452-PA 40..468 77..502 600 31.8 Plus
Dsim\GD24127-PA 513 GD24127-PA 12..468 44..492 583 29.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:06:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17482-PA 559 GJ17482-PA 1..558 35..588 2160 69.8 Plus
Dvir\GJ17608-PA 568 GJ17608-PA 3..483 33..508 1155 46.1 Plus
Dvir\GJ17481-PA 520 GJ17481-PA 12..467 49..502 727 33.3 Plus
Dvir\GJ19730-PA 490 GJ19730-PA 18..472 50..494 722 33.3 Plus
Dvir\GJ17710-PA 508 GJ17710-PA 12..482 44..497 597 30.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14976-PA 566 GK14976-PA 1..566 35..589 2274 73.1 Plus
Dwil\GK24723-PA 532 GK24723-PA 3..448 65..507 1155 47.9 Plus
Dwil\GK14659-PA 491 GK14659-PA 12..463 44..492 679 32.4 Plus
Dwil\GK14975-PA 517 GK14975-PA 40..467 77..502 650 33.6 Plus
Dwil\GK18172-PA 515 GK18172-PA 22..459 47..485 595 31.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11255-PA 555 GE11255-PA 1..555 35..589 2708 87.6 Plus
Dyak\GE18358-PA 529 GE18358-PA 3..448 65..507 1164 47.4 Plus
Dyak\crq-PA 491 GE16106-PA 12..460 44..488 726 33.7 Plus
Dyak\GE11250-PA 518 GE11250-PA 40..468 77..502 723 33.7 Plus
Dyak\GE12810-PA 513 GE12810-PA 43..494 75..509 597 30 Plus

RE21078.hyp Sequence

Translation from 379 to 2148

> RE21078.hyp
MLSAQQEIDRGRRPANKEHQFTAPPPRLRRSSTKMTSRTRHCARLGIVLL
GICCIASGIYLFRNWIDMFTRMRGQEMALSPNSRSFEGWKVSPLPLDFDI
YLFNWTNPDDFYVGSNKKPHFEQLGPYRFREKPDKVDIEWHNHNASVSFH
KKSWFYFDAAGSNGSLWDKVTTVNSVAHSAARRAAVDWFARTGVNIANKL
YRQGVTITKTVDEMLFKGYEHPFISVGKLLRPQDVPYKRIGYHYPRNGSS
EFDGDINMFTGADDIAKMGQIHTWNNLTHTGAFEGTCGQVHGSMGEFFPP
NLGTKDTVYMYMPKMCRAIPLDYVETVTVHGVTAYKFSGTRHAVDNGTLY
PDTRCYCVGGKCMPSGVINIGPCSFNASVYMSFPHFYMADPSYLEAIEGL
RPEREKHEFFMALEPNAGVPMDVGGGFQANYYMEPIPGITLYENVPTVMI
PMMWCEERVRVSEEIAADIALVPLIVLLGQIVTGILLAGGLICTCWYPTR
QVTHFCHSDPKAKASVLRPLNAFGVNSSAATAPVAQLFRNNISSSGNERV
GVRLLDYNRDSGIRLESGTMESSHRERLISEDSPDVVVR*

RE21078.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:01:19
Subject Length Description Subject Range Query Range Score Percent Strand
pes-PF 555 CG7228-PF 1..555 35..589 3004 100 Plus
pes-PH 555 CG7228-PH 1..555 35..589 3004 100 Plus
pes-PG 555 CG7228-PG 1..555 35..589 3004 100 Plus
pes-PD 555 CG7228-PD 1..555 35..589 3004 100 Plus
pes-PC 555 CG7228-PC 1..555 35..589 3004 100 Plus