BDGP Sequence Production Resources |
Search the DGRC for RE21692
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 216 |
Well: | 92 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG5642-RA |
Protein status: | RE21692.pep: gold |
Preliminary Size: | 1857 |
Sequenced Size: | 1861 |
Gene | Date | Evidence |
---|---|---|
CG5642 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5642 | 2002-02-22 | Blastp of sequenced clone |
CG5642 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5642 | 2008-04-29 | Release 5.5 accounting |
CG5642 | 2008-08-15 | Release 5.9 accounting |
CG5642 | 2008-12-18 | 5.12 accounting |
1861 bp (1861 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089607
> RE21692.complete GGTTGGTCACACTGTTTATCCCTCTTTTCGCCAAAAATTTGTTGGCGTGT TGTCAATTTCCTAAGCATTTGATCGGTTTTTTCGTTTTGTGTGTAACCCG GAGAGGATAAAACAGCGACAATGTACGGTGGAGACGAATACGCAACCAAC TCGGATTACTACGATGACTACGCTCATACCGGAGACCCGCAACTGGACAT GGAGTACGAGAGGAACTACTACGCCGCCCGGATGCCGGACAACGTCAAGT ACTTCCTCATAAACTTCTGCCAGGCGATCAAAGAGGGCAACTTGTACGAC ATCCAAAACATGTACGAGAACACGTTCCCGCAGATCAGCGACCACCACTT CGACAAGACTGCTTGGCCCGAGGAGCAGGAGGTGGCTGCTATTGTAGACA ACGACAAGGTCTTCCTGATCTTATACAAGGAGTTGTACTATCGCCACATC CACGCCCGCATCCCCGGTGGTCCCAAGTTGGAGCAGAGGATCAACTCGTT CTTCAACTACTGCGACTTCTTCAACCTGATCATCTCGGCCCAGAACCCAG TGATGCTGGAGCTGCCCGACATCTGGCTGTGGGAGTTGGTGGATGAGTTC GTGTATCAGTTCCAGAACTTCGCGCAGTATCGCGCCCGCCTTACGGAGAA ATCGCAGGATGAGATCCAGCAGCTGTGCGTGAACCACAGCAACGAGTGGA GCATTCTCTGCATCCTCAACGTTCTGCATTCCCTTGTGGACATCTCGAAC ATCAAGAAGCAGCTGGAGGCCATCTCTCAAGGTGTTGATCCCCAAACCGT GGCCGGTGACTTCGGCAAACTGTCCTTCTACAAGATGCTGGGATACTTCT CCCTTGTCGGACTGCTGCGCGTTCATTCGCTGCTGGGTGACTACTACCAG GCCATCAAGGTGCTGGAGCCCATTGAGATCCACAAGAAGTCCGCCTATTC GCACATCCCCGCCTGCCAAATCTCGACGTCGTACTACGTGGGCTTCGCCT ACATGATGATGCGCCGCTACGCTGATGCCATCCGCACCTTTTCTGATATC CTCCTGTACATTCAGCGTACCAAGCAGCTGTACAGCACGCGTTCATACCA AAACGATCAAATCAACAAGCAGGCCGAGCAGATGTACCATCTTTTGGCCA TCTGCCTGGTACTCCATCCCCAGTGCATCGACGAGTCCATCCAGCAGGTG CTCAGGGAAAAGAACTACCACGACGCCATGTTTAAGATGCAGTGCGGTGA TCTGGAGGTCTTCAAGTCCTTCTTTGTCTTCGCCTGCCCACGTTTCGTGA GCCCCTGCCCGCCAGCTGTAGACGCACCCATGGACGACTACGTCAAGGAC CCCATGGAACACCAGTTGCAGGTTTTCATGGATGAGGTGCGCCAGCAGAA GGATCTGCCCACAACGCGCTCGTATCTAAAGCTGTACACCACCCTGCCGC TGACCAAACTGGCATCTTTCATCGATCCCAACGCCAGCGAGGATGACGTG TCGAAGCTGCTGATTCGCCTGCTTTGCTTCAAGCACAAAATGCGCAACCT AGTGTGGAGCAAGGGACCCAGCGGCCTGGAAGGCACATTCAAGTCTGGCT CCGAGTTGGACTTCTACATCGACGACGACATGATCCACATAGCCGACACC AAGGTTTCACATCGGTATGGCGACTTCTTTGTGCGTAAAATTCTTAAGTT CAACGATCTGAATCGCAAATTGAAGAACATCAACATTTAAGCCGACTCCT TGTGACCCTTAATGATAAATTTAATATTCCATACTGGACCGATTTGTTTC GATATCAATAAAAATCGCTTGCGATCTTGCGCAAGTTTGGTCCTCAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5642-RA | 2013 | CG5642-RA | 127..1974 | 2..1849 | 9225 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 12134494..12135467 | 1605..632 | 4855 | 99.9 | Minus |
chr3L | 24539361 | chr3L | 12135521..12136000 | 632..153 | 2385 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 12134195..12134436 | 1845..1604 | 1210 | 100 | Minus |
chr3L | 24539361 | chr3L | 12136704..12136856 | 154..2 | 750 | 99.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 12143745..12144718 | 1605..632 | 4855 | 99.9 | Minus |
3L | 28110227 | 3L | 12144772..12145251 | 632..153 | 2400 | 100 | Minus |
3L | 28110227 | 3L | 12143442..12143687 | 1849..1604 | 1230 | 100 | Minus |
3L | 28110227 | 3L | 12145955..12146107 | 154..2 | 765 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 12136845..12137818 | 1605..632 | 4855 | 99.8 | Minus |
3L | 28103327 | 3L | 12137872..12138351 | 632..153 | 2400 | 100 | Minus |
3L | 28103327 | 3L | 12136542..12136787 | 1849..1604 | 1230 | 100 | Minus |
3L | 28103327 | 3L | 12139055..12139207 | 154..2 | 765 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 12134195..12134434 | 1606..1845 | 100 | <- | Minus |
chr3L | 12134494..12135466 | 633..1605 | 99 | <- | Minus |
chr3L | 12135521..12135999 | 154..632 | 99 | <- | Minus |
chr3L | 12136705..12136856 | 1..153 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5642-RA | 1..1620 | 121..1740 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5642-RA | 1..1620 | 121..1740 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5642-RA | 1..1620 | 121..1740 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5642-RA | 1..1620 | 121..1740 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5642-RA | 1..1620 | 121..1740 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5642-RA | 8..1852 | 1..1845 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5642-RA | 8..1852 | 1..1845 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5642-RA | 1..1834 | 12..1845 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5642-RA | 8..1852 | 1..1845 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5642-RA | 1..1834 | 12..1845 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12143446..12143685 | 1606..1845 | 100 | <- | Minus |
3L | 12143745..12144717 | 633..1605 | 99 | <- | Minus |
3L | 12144772..12145250 | 154..632 | 100 | <- | Minus |
3L | 12145956..12146107 | 1..153 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12143446..12143685 | 1606..1845 | 100 | <- | Minus |
3L | 12143745..12144717 | 633..1605 | 99 | <- | Minus |
3L | 12144772..12145250 | 154..632 | 100 | <- | Minus |
3L | 12145956..12146107 | 1..153 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12143446..12143685 | 1606..1845 | 100 | <- | Minus |
3L | 12143745..12144717 | 633..1605 | 99 | <- | Minus |
3L | 12144772..12145250 | 154..632 | 100 | <- | Minus |
3L | 12145956..12146107 | 1..153 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 12136546..12136785 | 1606..1845 | 100 | <- | Minus |
arm_3L | 12136845..12137817 | 633..1605 | 99 | <- | Minus |
arm_3L | 12137872..12138350 | 154..632 | 100 | <- | Minus |
arm_3L | 12139056..12139207 | 1..153 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12136546..12136785 | 1606..1845 | 100 | <- | Minus |
3L | 12136845..12137817 | 633..1605 | 99 | <- | Minus |
3L | 12137872..12138350 | 154..632 | 100 | <- | Minus |
3L | 12139056..12139207 | 1..153 | 99 | Minus |
Translation from 120 to 1739
> RE21692.pep MYGGDEYATNSDYYDDYAHTGDPQLDMEYERNYYAARMPDNVKYFLINFC QAIKEGNLYDIQNMYENTFPQISDHHFDKTAWPEEQEVAAIVDNDKVFLI LYKELYYRHIHARIPGGPKLEQRINSFFNYCDFFNLIISAQNPVMLELPD IWLWELVDEFVYQFQNFAQYRARLTEKSQDEIQQLCVNHSNEWSILCILN VLHSLVDISNIKKQLEAISQGVDPQTVAGDFGKLSFYKMLGYFSLVGLLR VHSLLGDYYQAIKVLEPIEIHKKSAYSHIPACQISTSYYVGFAYMMMRRY ADAIRTFSDILLYIQRTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHP QCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSFFVFACPRFVSPCPPAV DAPMDDYVKDPMEHQLQVFMDEVRQQKDLPTTRSYLKLYTTLPLTKLASF IDPNASEDDVSKLLIRLLCFKHKMRNLVWSKGPSGLEGTFKSGSELDFYI DDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKNINI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25000-PA | 539 | GF25000-PA | 1..539 | 1..539 | 2791 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13851-PA | 539 | GG13851-PA | 1..539 | 1..539 | 2877 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15308-PA | 540 | GH15308-PA | 1..540 | 1..539 | 2786 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
eIF3l-PA | 539 | CG5642-PA | 1..539 | 1..539 | 2873 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12903-PA | 538 | GI12903-PA | 1..538 | 1..539 | 2811 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25016-PA | 541 | GL25016-PA | 4..541 | 2..539 | 2762 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19025-PA | 541 | GA19025-PA | 4..541 | 2..539 | 2768 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24677-PA | 539 | GM24677-PA | 1..539 | 1..539 | 2903 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12745-PA | 539 | GD12745-PA | 1..539 | 1..539 | 2903 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13043-PA | 538 | GJ13043-PA | 1..538 | 1..539 | 2813 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20774-PA | 539 | GK20774-PA | 1..539 | 1..539 | 2802 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20146-PA | 539 | GE20146-PA | 1..539 | 1..539 | 2873 | 98.5 | Plus |
Translation from 120 to 1739
> RE21692.hyp MYGGDEYATNSDYYDDYAHTGDPQLDMEYERNYYAARMPDNVKYFLINFC QAIKEGNLYDIQNMYENTFPQISDHHFDKTAWPEEQEVAAIVDNDKVFLI LYKELYYRHIHARIPGGPKLEQRINSFFNYCDFFNLIISAQNPVMLELPD IWLWELVDEFVYQFQNFAQYRARLTEKSQDEIQQLCVNHSNEWSILCILN VLHSLVDISNIKKQLEAISQGVDPQTVAGDFGKLSFYKMLGYFSLVGLLR VHSLLGDYYQAIKVLEPIEIHKKSAYSHIPACQISTSYYVGFAYMMMRRY ADAIRTFSDILLYIQRTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHP QCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSFFVFACPRFVSPCPPAV DAPMDDYVKDPMEHQLQVFMDEVRQQKDLPTTRSYLKLYTTLPLTKLASF IDPNASEDDVSKLLIRLLCFKHKMRNLVWSKGPSGLEGTFKSGSELDFYI DDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKNINI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5642-PA | 539 | CG5642-PA | 1..539 | 1..539 | 2873 | 100 | Plus |