BDGP Sequence Production Resources |
Search the DGRC for RE21802
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 218 |
Well: | 2 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG1354-RA |
Protein status: | RE21802.pep: gold |
Preliminary Size: | 1200 |
Sequenced Size: | 1509 |
Gene | Date | Evidence |
---|---|---|
CG1354 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1354 | 2002-04-04 | Blastp of sequenced clone |
CG1354 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1354 | 2008-04-29 | Release 5.5 accounting |
CG1354 | 2008-08-15 | Release 5.9 accounting |
CG1354 | 2008-12-18 | 5.12 accounting |
1509 bp (1509 high quality bases) assembled on 2002-04-04
GenBank Submission: AY095074
> RE21802.complete CTTTTTTCCTTCCACGCCGTCAGCCGCAAAAAACAGCGGACGCTTAAATT TTCCTGGAGCTGAGTTCAGTGGGCAGCATCCACGCGTTTAGTGAGCTAGA TCAACGAAGATGCCGCCCAAGAAGCACGACGAACCGGAGCGCAAGCCGCT GATCGGCAGAATTGGAACGAATCTGAGAATCGGTATCGTTGGCGTTCCCA ACGTGGGCAAGTCCACTTTTTTCAACGTTCTGACCCAAAGTGCCGCCCCC GCGGAGAACTTCCCCTTCTGCACCATCAAGCCGAATGAGAGTCGTGTTCC GGTGCCCGATGAGCGTTTCGATTACCTGGTGGAGTACCACAAGCCGGCCA GTGTGGTTCCTGCCTATTTGAACGTCGTGGACATTGCTGGCTTGGTGAAG GGAGCCGCCGAGGGTCAGGGACTTGGCAACGACTTCCTCTCGCACATCAG CGCCTGCGATGCCATTTTCCACTTGTGCCGCGCCTTCGAGGATCCGGATG TGACCCACGTGGAGGGCGAGGTGGATCCGGTGCGCGATCTGGAGATCATC TCCGAGGAGCTGCGCCTCAAGGACGAGGAGAATCTGCTCAAGAACTTGGA CAAACTGGAGAAGGTGGTGGCCCGCGGCGGCGACAAGAAGCTCAAGCCCG AATACGATTCGATGCTTAAGATTAAGGATATCCTTATCGATCAGAAGCGT CATCTGCGCTTCGAGGACTGGAATGCCCATGATATTGAGGCCTTGAACAA GTATCTGTTCCTGACCTCCAAACCGGTCATCTACCTGGTGAACCTTTCGG ACAAGGACTTCATCCGCAAGAAGAACAAGTGGCTGCCGAAGATCAAGGAA TGGATCGACAAGAACGATCCCGGAGCACTGCTCATTCCCTTCTCCGGCGC CTTCGAGCACCAGCTGACCGAAAAGGACGAACTGGAGCGCAAGGCCTACG AGACGGAGACCAAGTGCAAAAGTATGCTGGAGAAGATCGTTGTGACCGGC TACAAGGGACTGCAGCTGGAGTACTTCTTCACCGCCGGGCCGGATGAAGT GAAGGCCTGGACCATCCAGAAGGGCACCAAGGCTCCCCAGGCTGCCGGAC GCATTCACACCGACTTCGAGAAGGGCTTCATTATGGCCGAGGTGATGCAC TTCGAGGACTTCAAGGCGGAGGGCAGTGAGGCGAATGCCAAGGCCGCTGG CAAATATCGCCAACAGGGACGCAACTACACCGTCGAGGATGGCGACATCA TATTCTTTAAGTTCAACGCCGGCGCTGGCCTCAAGGATGCCAAGAAGAAA TGATACCGTTTGGCCATGATCATCGCCATGTCCACCGTTTTGTACATTAA CTTGATCTTGTACTCCCAGATGTTTCGCTTCGCCAGAGGCTAGCTCCTCA TTATCACATCCCTCACTCTCATGTTCGAGGCCTGAAAATGCATTTTGAAT TTCCTTTTTTTTTGTACGCTATGTAAACACGCTTATGACACACAAAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1354-RA | 1877 | CG1354-RA | 105..1595 | 5..1495 | 7440 | 99.9 | Plus |
CG1354-RD | 1887 | CG1354-RD | 155..1605 | 45..1495 | 7210 | 99.7 | Plus |
CG1354-RC | 1524 | CG1354-RC | 131..1524 | 100..1493 | 6970 | 100 | Plus |
CG1354-RD | 1887 | CG1354-RD | 105..153 | 5..53 | 245 | 100 | Plus |
CG1354-RC | 1524 | CG1354-RC | 6..54 | 5..53 | 245 | 100 | Plus |
CG1354-RC | 1524 | CG1354-RC | 56..110 | 45..99 | 230 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 9672919..9673678 | 734..1493 | 3740 | 99.5 | Plus |
chrX | 22417052 | chrX | 9672269..9672652 | 350..733 | 1890 | 99.5 | Plus |
chrX | 22417052 | chrX | 9670811..9671003 | 98..290 | 965 | 100 | Plus |
chrX | 22417052 | chrX | 9672002..9672062 | 291..351 | 305 | 100 | Plus |
chrX | 22417052 | chrX | 9670512..9670560 | 5..53 | 245 | 100 | Plus |
chrX | 22417052 | chrX | 9670629..9670674 | 54..99 | 215 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 9781159..9781920 | 734..1495 | 3810 | 100 | Plus |
X | 23542271 | X | 9780509..9780892 | 350..733 | 1920 | 100 | Plus |
X | 23542271 | X | 9779050..9779242 | 98..290 | 965 | 100 | Plus |
X | 23542271 | X | 9780241..9780301 | 291..351 | 305 | 100 | Plus |
X | 23542271 | X | 9778751..9778799 | 5..53 | 245 | 100 | Plus |
X | 23542271 | X | 9778868..9778913 | 54..99 | 215 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 9789257..9790018 | 734..1495 | 3810 | 100 | Plus |
X | 23527363 | X | 9788607..9788990 | 350..733 | 1920 | 100 | Plus |
X | 23527363 | X | 9787148..9787340 | 98..290 | 965 | 100 | Plus |
X | 23527363 | X | 9788339..9788399 | 291..351 | 305 | 100 | Plus |
X | 23527363 | X | 9786849..9786897 | 5..53 | 245 | 100 | Plus |
X | 23527363 | X | 9786966..9787011 | 54..99 | 215 | 97.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9670507..9670560 | 1..53 | 96 | -> | Plus |
chrX | 9670629..9670674 | 54..99 | 97 | -> | Plus |
chrX | 9670813..9671007 | 100..294 | 98 | -> | Plus |
chrX | 9672006..9672062 | 295..351 | 100 | -> | Plus |
chrX | 9672271..9672652 | 352..733 | 99 | -> | Plus |
chrX | 9672919..9673678 | 734..1493 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1354-RA | 1..1194 | 110..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1354-RA | 1..1194 | 110..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1354-RD | 1..1194 | 110..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1354-RA | 1..1194 | 110..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1354-RD | 1..1194 | 110..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1354-RA | 1..1494 | 1..1493 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1354-RA | 1..1494 | 1..1493 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1354-RA | 5..1498 | 1..1493 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1354-RA | 1..1494 | 1..1493 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1354-RA | 5..1498 | 1..1493 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9779052..9779246 | 100..294 | 98 | -> | Plus |
X | 9780245..9780301 | 295..351 | 100 | -> | Plus |
X | 9778746..9778799 | 1..53 | 96 | -> | Plus |
X | 9778868..9778913 | 54..99 | 97 | -> | Plus |
X | 9780511..9780892 | 352..733 | 100 | -> | Plus |
X | 9781159..9781918 | 734..1493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9779052..9779246 | 100..294 | 98 | -> | Plus |
X | 9780245..9780301 | 295..351 | 100 | -> | Plus |
X | 9778746..9778799 | 1..53 | 96 | -> | Plus |
X | 9778868..9778913 | 54..99 | 97 | -> | Plus |
X | 9780511..9780892 | 352..733 | 100 | -> | Plus |
X | 9781159..9781918 | 734..1493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9779052..9779246 | 100..294 | 98 | -> | Plus |
X | 9780245..9780301 | 295..351 | 100 | -> | Plus |
X | 9778746..9778799 | 1..53 | 96 | -> | Plus |
X | 9778868..9778913 | 54..99 | 97 | -> | Plus |
X | 9780511..9780892 | 352..733 | 100 | -> | Plus |
X | 9781159..9781918 | 734..1493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9672779..9672832 | 1..53 | 96 | -> | Plus |
arm_X | 9672901..9672946 | 54..99 | 97 | -> | Plus |
arm_X | 9673085..9673279 | 100..294 | 98 | -> | Plus |
arm_X | 9674278..9674334 | 295..351 | 100 | -> | Plus |
arm_X | 9674544..9674925 | 352..733 | 100 | -> | Plus |
arm_X | 9675192..9675951 | 734..1493 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9788609..9788990 | 352..733 | 100 | -> | Plus |
X | 9789257..9790016 | 734..1493 | 100 | Plus | |
X | 9786844..9786897 | 1..53 | 96 | -> | Plus |
X | 9786966..9787011 | 54..99 | 97 | -> | Plus |
X | 9787150..9787344 | 100..294 | 98 | -> | Plus |
X | 9788343..9788399 | 295..351 | 100 | -> | Plus |
Translation from 109 to 1302
> RE21802.pep MPPKKHDEPERKPLIGRIGTNLRIGIVGVPNVGKSTFFNVLTQSAAPAEN FPFCTIKPNESRVPVPDERFDYLVEYHKPASVVPAYLNVVDIAGLVKGAA EGQGLGNDFLSHISACDAIFHLCRAFEDPDVTHVEGEVDPVRDLEIISEE LRLKDEENLLKNLDKLEKVVARGGDKKLKPEYDSMLKIKDILIDQKRHLR FEDWNAHDIEALNKYLFLTSKPVIYLVNLSDKDFIRKKNKWLPKIKEWID KNDPGALLIPFSGAFEHQLTEKDELERKAYETETKCKSMLEKIVVTGYKG LQLEYFFTAGPDEVKAWTIQKGTKAPQAAGRIHTDFEKGFIMAEVMHFED FKAEGSEANAKAAGKYRQQGRNYTVEDGDIIFFKFNAGAGLKDAKKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25119-PA | 397 | GF25119-PA | 1..397 | 1..397 | 2001 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18324-PA | 397 | GG18324-PA | 1..397 | 1..397 | 2098 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11803-PA | 397 | GH11803-PA | 1..397 | 1..397 | 1988 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1354-PE | 397 | CG1354-PE | 1..397 | 1..397 | 2086 | 100 | Plus |
CG1354-PA | 397 | CG1354-PA | 1..397 | 1..397 | 2086 | 100 | Plus |
CG1354-PD | 397 | CG1354-PD | 1..397 | 1..397 | 2086 | 100 | Plus |
CG1354-PC | 397 | CG1354-PC | 1..397 | 1..397 | 2086 | 100 | Plus |
CG1354-PB | 348 | CG1354-PB | 13..348 | 62..397 | 1761 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15984-PA | 397 | GI15984-PA | 1..397 | 1..397 | 2023 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16374-PA | 397 | GL16374-PA | 1..397 | 1..397 | 2011 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12352-PA | 397 | GA12352-PA | 1..397 | 1..397 | 2031 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11387-PA | 397 | GM11387-PA | 1..397 | 1..397 | 2099 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24779-PA | 383 | GD24779-PA | 1..378 | 1..378 | 2005 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18714-PA | 397 | GJ18714-PA | 1..397 | 1..397 | 2011 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25358-PA | 397 | GK25358-PA | 1..397 | 1..397 | 2011 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17809-PA | 432 | GE17809-PA | 1..432 | 1..397 | 2051 | 91.2 | Plus |
Translation from 109 to 1302
> RE21802.hyp MPPKKHDEPERKPLIGRIGTNLRIGIVGVPNVGKSTFFNVLTQSAAPAEN FPFCTIKPNENNVPVPDERFDYLVEYHKPASVVPAYLNVVDIAGLVKGAA EGQGLGNDFLSHISACDAIFHLCRAFEDPDVTHVEGEVDPVRDLEIISEE LRLKDEENLLKNLDKLEKVVARGGDKKLKPEYDSMLKIKDILIDQKRHLR FEDWNAHDIEALNKYLFLTSKPVIYLVNLSDKDFIRKKNKWLPKIKEWID KNDPGALLIPFSGAFEHQLTEKDELERKAYETETKCKSMLEKIVVTGYKG LQLEYFFTAGPDEVKAWTIQKGTKAPQAAGRIHTDFEKGFIMAEVMHFED FKAEGSEANAKAAGKYRQQGRNYTVEDGDIIFFKFNAGAGLKDAKKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1354-PE | 397 | CG1354-PE | 1..397 | 1..397 | 2078 | 99.5 | Plus |
CG1354-PA | 397 | CG1354-PA | 1..397 | 1..397 | 2078 | 99.5 | Plus |
CG1354-PD | 397 | CG1354-PD | 1..397 | 1..397 | 2078 | 99.5 | Plus |
CG1354-PC | 397 | CG1354-PC | 1..397 | 1..397 | 2078 | 99.5 | Plus |
CG1354-PB | 348 | CG1354-PB | 14..348 | 63..397 | 1756 | 100 | Plus |