BDGP Sequence Production Resources |
Search the DGRC for RE21944
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 219 |
Well: | 44 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14568-RA |
Protein status: | RE21944.pep: gold |
Preliminary Size: | 453 |
Sequenced Size: | 695 |
Gene | Date | Evidence |
---|---|---|
CG14568 | 2001-12-14 | Blastp of sequenced clone |
CG14568 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14568 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14568 | 2008-04-29 | Release 5.5 accounting |
CG14568 | 2008-08-15 | Release 5.9 accounting |
CG14568 | 2008-12-18 | 5.12 accounting |
695 bp (695 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071171
> RE21944.complete AACATTCTAAGACAACTCAGCAGCAGCTCAACATGGCCCACAAGTTCATC TGCTCCCTGCTCCTGATCGCAGCCATGGCTGCCGTTTCTGTTGCAGAGCC TACCAGATTCCGGGGACGATTTTCCCGCCTGCAGTTTGCCCGTCAGGAGC AGGCTCCAGGGGATCAGGCAGTTCCGGCCGACCCCGCCGTGGATATTGCA CCTACGCCGGCCTCAGCCCCTTATCCGCCAGCAGGAGTGACACCGGAGGT GCCCTTCGACCTGCCCACGGAGACTGAAGCGCAACCTGATCTTACCTACG GACCCCCAGATGAGCCCGACAACACCTACGGCCCTCCCGATAACACTTAC GGACCACCTGCTGAGCCGGAAAACACCTATGGACCGCCGGCTGATGGCCC AGTGGACCAGGCCCCTGCTGCCGATCCCGTGCCCGCCGGCTTGATCCAGC CTCGTAACGAACGCCTCCTCAGTCGTCGTCCGACCCCAGAGAAGCTTCGA TCCGCTCAGATTATCCGCTCTGGATCAGTTCTGGTGTACACCATCTGAAA TGGGTCAACCCTAATTTGCTAGAAATCAAATGGAATCGACTCATTAGGAT ATGCATTTATTACTTTGTCGCTAAATAAATTGTTGTTGAATATTTTAATT TAAATAATAAAATAATTGCGTTAATATCCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14568-RA | 679 | CG14568-RA | 1..677 | 1..677 | 3385 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 21721743..21722419 | 677..1 | 3385 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 21732804..21733484 | 681..1 | 3390 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 21725904..21726584 | 681..1 | 3390 | 99.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 21721786..21722419 | 1..634 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14568-RA | 1..516 | 33..548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14568-RA | 1..516 | 33..548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14568-RA | 1..516 | 33..548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14568-RA | 1..516 | 33..548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14568-RA | 1..516 | 33..548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14568-RA | 1..676 | 1..676 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14568-RA | 1..679 | 1..679 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14568-RA | 4..682 | 1..679 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14568-RA | 1..676 | 1..676 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14568-RA | 4..682 | 1..679 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21732806..21733484 | 1..679 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21732806..21733484 | 1..679 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21732806..21733484 | 1..679 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 21725906..21726584 | 1..679 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21725906..21726584 | 1..679 | 99 | Minus |
Translation from 2 to 547
> RE21944.hyp HSKTTQQQLNMAHKFICSLLLIAAMAAVSVAEPTRFRGRFSRLQFARQEQ APGDQAVPADPAVDIAPTPASAPYPPAGVTPEVPFDLPTETEAQPDLTYG PPDEPDNTYGPPDNTYGPPAEPENTYGPPADGPVDQAPAADPVPAGLIQP RNERLLSRRPTPEKLRSAQIIRSGSVLVYTI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14568-PA | 171 | CG14568-PA | 1..171 | 11..181 | 905 | 100 | Plus |
CG14569-PA | 195 | CG14569-PA | 11..114 | 20..149 | 217 | 42.5 | Plus |
CG14570-PA | 228 | CG14570-PA | 14..166 | 16..169 | 199 | 33.7 | Plus |
CG14566-PB | 166 | CG14566-PB | 6..121 | 19..136 | 163 | 40.6 | Plus |
CG14566-PA | 166 | CG14566-PA | 6..121 | 19..136 | 163 | 40.6 | Plus |
Translation from 32 to 547
> RE21944.pep MAHKFICSLLLIAAMAAVSVAEPTRFRGRFSRLQFARQEQAPGDQAVPAD PAVDIAPTPASAPYPPAGVTPEVPFDLPTETEAQPDLTYGPPDEPDNTYG PPDNTYGPPAEPENTYGPPADGPVDQAPAADPVPAGLIQPRNERLLSRRP TPEKLRSAQIIRSGSVLVYTI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24639-PA | 179 | GF24639-PA | 1..179 | 1..171 | 696 | 82.7 | Plus |
Dana\GF24641-PA | 239 | GF24641-PA | 49..128 | 62..114 | 138 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13205-PA | 171 | GG13205-PA | 1..171 | 1..171 | 710 | 89.5 | Plus |
Dere\GG13206-PA | 195 | GG13206-PA | 34..114 | 53..139 | 182 | 56.8 | Plus |
Dere\GG13207-PA | 228 | GG13207-PA | 44..157 | 61..150 | 144 | 40.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15094-PA | 180 | GH15094-PA | 39..180 | 38..171 | 371 | 69.4 | Plus |
Dgri\GH15095-PA | 174 | GH15095-PA | 5..115 | 7..131 | 138 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14568-PA | 171 | CG14568-PA | 1..171 | 1..171 | 905 | 100 | Plus |
CG14569-PA | 195 | CG14569-PA | 11..114 | 10..139 | 217 | 42.5 | Plus |
CG14570-PA | 228 | CG14570-PA | 14..166 | 6..159 | 199 | 33.7 | Plus |
CG14566-PB | 166 | CG14566-PB | 6..121 | 9..126 | 163 | 40.6 | Plus |
CG14566-PA | 166 | CG14566-PA | 6..121 | 9..126 | 163 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13743-PA | 209 | GI13743-PA | 25..208 | 1..171 | 392 | 65.3 | Plus |
Dmoj\GI13744-PA | 188 | GI13744-PA | 5..88 | 7..109 | 191 | 50 | Plus |
Dmoj\GI13745-PA | 265 | GI13745-PA | 37..120 | 61..119 | 177 | 53.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25274-PA | 184 | GL25274-PA | 1..184 | 1..171 | 460 | 59.1 | Plus |
Dper\GL25275-PA | 196 | GL25275-PA | 8..96 | 7..110 | 206 | 51.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13087-PA | 181 | GA13087-PA | 1..181 | 1..171 | 598 | 73.5 | Plus |
Dpse\GA13088-PA | 196 | GA13088-PA | 8..96 | 7..110 | 210 | 50.9 | Plus |
Dpse\GA13089-PA | 225 | GA13089-PA | 2..129 | 1..139 | 167 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22114-PA | 171 | GM22114-PA | 1..171 | 1..171 | 808 | 95.3 | Plus |
Dsec\GM22115-PA | 195 | GM22115-PA | 11..114 | 10..139 | 179 | 42.5 | Plus |
Dsec\GM22116-PA | 228 | GM22116-PA | 9..132 | 1..139 | 161 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12091-PA | 171 | GD12091-PA | 1..171 | 1..171 | 818 | 96.5 | Plus |
Dsim\GD12092-PA | 195 | GD12092-PA | 11..114 | 10..139 | 194 | 45.8 | Plus |
Dsim\GD12093-PA | 228 | GD12093-PA | 9..117 | 1..114 | 160 | 36.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14088-PA | 177 | GJ14088-PA | 1..177 | 1..171 | 452 | 60.4 | Plus |
Dvir\GJ14090-PA | 189 | GJ14090-PA | 5..105 | 7..132 | 189 | 43.3 | Plus |
Dvir\GJ14091-PA | 261 | GJ14091-PA | 37..109 | 61..128 | 177 | 57.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17124-PA | 178 | GK17124-PA | 21..178 | 20..171 | 361 | 65.5 | Plus |
Dwil\GK17127-PA | 230 | GK17127-PA | 33..106 | 62..121 | 180 | 59.5 | Plus |
Dwil\GK17126-PA | 185 | GK17126-PA | 1..95 | 1..114 | 150 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22985-PA | 171 | GE22985-PA | 1..171 | 1..171 | 778 | 89.5 | Plus |
Dyak\GE22299-PA | 171 | GE22299-PA | 1..171 | 1..171 | 778 | 89.5 | Plus |
Dyak\GE22986-PA | 195 | GE22986-PA | 34..114 | 53..139 | 172 | 54.5 | Plus |
Dyak\GE22300-PA | 195 | GE22300-PA | 34..114 | 53..139 | 172 | 54.5 | Plus |
Dyak\GE22987-PA | 220 | GE22987-PA | 9..125 | 1..134 | 171 | 37.4 | Plus |