BDGP Sequence Production Resources |
Search the DGRC for RE22146
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 221 |
Well: | 46 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG10903-RA |
Protein status: | RE22146.pep: gold |
Preliminary Size: | 831 |
Sequenced Size: | 1138 |
Gene | Date | Evidence |
---|---|---|
CG10903 | 2001-12-14 | Blastp of sequenced clone |
CG10903 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10903 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10903 | 2008-04-29 | Release 5.5 accounting |
CG10903 | 2008-08-15 | Release 5.9 accounting |
CG10903 | 2008-12-18 | 5.12 accounting |
1138 bp (1138 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071172
> RE22146.complete GTGAATGAGAAACAGCTGCTTGTTGATTGCACATGTGCTTATTTTTTTGT TTACCTAAACGCTCCAGAATTTCTGTGCACAACTTTGTAAATTACAGATA AATAATATAGGAAGAATGGCCAGAAGACCAGAGCATTCGGCGCCGCCAGA AATTTTCTACAACGATGATGAGGCCAAGAAATATTCCACAAACACCCGCA TCATTGAGATCCAAGTAGAAATGGCCGAACGTGCCTTGGAACTATTGGCG CTCCCGGATGATGATGAGTCTCGGTTGATTTTGGACATCGGCTGTGGTTC TGGACTCTCAGGTAGCGTTCTTGAGGACAGCGAGCACATGTGGATCGGCA TAGATATTTCCAAGTCTATGCTCGATATCGCCGTGGAACGCGAGGTTGCT GGGGATGTCATTCTGGGAGACATGGGCGAGGGAATGCCCTTTAAGCCGGG CACTTTCGACGGCGCCATCTCGATCTCTGCCCTCCAATGGCTCTGCAATG CGGACAAGTCGTATCACAATCCCCACAAGCGCCTGCTGAAGTTCTTTACC ACCTTGTTTTCCTGTCTGACACGCACCGCGCGAGCTGTCTTTCAATTTTA TCCGGAGAACTCCGATCAGATCGAGATGGTAACCTCGCAAGCCATGAAGG CGGGATTCTACGGAGGATTGGTTGTCGACTATCCAAACTCTGCCAAGGCT AAGAAGTACTACCTGGTGCTCATGACTGGAGGATCTGCTGAGCTGCCGCA GGCTTTGGGCTCACCTGAAGAGGAACGTCGTGTAAACTATATAAAGAAAC GTGATGCTTGCCGTGAGGCTCGGGGAAAAGCGCCAAAGAAATCCCGCGAT TGGATCCTAGCCAAGAAAGAGCGTCGACGTCGCCAGGGGTTGGAAACCCG TCCTGACACAAAGTACACTGCACGCAAGCGCAGCGGCAAATTTTGAATAA AGTTGTTACATTTAAAATTAGTGACAGACCTAATCTCTAATTGCGGCTTT GTCTATATGTTTTAGATCTTGAGTCAGATTAAGGATATTACAATGCCGTT GGATGTTTATATACATATGTATAAGTCCCGCTGCTATTCATCTTAAGTAA AACGGACACATCTTTAATTCACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10903-RA | 1122 | CG10903-RA | 1..1122 | 1..1122 | 5610 | 100 | Plus |
CG10903.b | 999 | CG10903.b | 32..999 | 155..1122 | 4840 | 100 | Plus |
CG10903.a | 1009 | CG10903.a | 80..1009 | 193..1122 | 4650 | 100 | Plus |
CG10903.a | 1009 | CG10903.a | 32..69 | 155..192 | 190 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 3857218..3857784 | 193..759 | 2835 | 100 | Plus |
chr3R | 27901430 | chr3R | 3857853..3858218 | 758..1122 | 1765 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 3856901..3857054 | 1..154 | 770 | 100 | Plus |
chr3L | 24539361 | chr3L | 5920400..5920444 | 994..1038 | 195 | 95.6 | Plus |
chr3R | 27901430 | chr3R | 3857118..3857155 | 155..192 | 190 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 8031146..8031712 | 193..759 | 2835 | 100 | Plus |
3R | 32079331 | 3R | 8031781..8032149 | 758..1126 | 1845 | 100 | Plus |
3R | 32079331 | 3R | 8030829..8030982 | 1..154 | 770 | 100 | Plus |
3L | 28110227 | 3L | 5927804..5927848 | 994..1038 | 195 | 95.6 | Plus |
3R | 32079331 | 3R | 8031046..8031083 | 155..192 | 190 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 7771977..7772543 | 193..759 | 2835 | 100 | Plus |
3R | 31820162 | 3R | 7772612..7772980 | 758..1126 | 1845 | 100 | Plus |
3R | 31820162 | 3R | 7771660..7771813 | 1..154 | 770 | 100 | Plus |
3L | 28103327 | 3L | 5920904..5920948 | 994..1038 | 195 | 95.5 | Plus |
3R | 31820162 | 3R | 7771877..7771914 | 155..192 | 190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 3856901..3857054 | 1..154 | 100 | -> | Plus |
chr3R | 3857118..3857155 | 155..192 | 100 | -> | Plus |
chr3R | 3857218..3857783 | 193..758 | 100 | -> | Plus |
chr3R | 3857854..3858218 | 759..1122 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10903-RA | 1..831 | 116..946 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10903-RA | 1..831 | 116..946 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10903-RA | 1..831 | 116..946 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10903-RA | 1..831 | 116..946 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10903-RA | 1..831 | 116..946 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10903-RA | 1..1122 | 1..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10903-RA | 1..1122 | 1..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10903-RA | 3..1124 | 1..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10903-RA | 1..1122 | 1..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10903-RA | 3..1124 | 1..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8030829..8030982 | 1..154 | 100 | -> | Plus |
3R | 8031046..8031083 | 155..192 | 100 | -> | Plus |
3R | 8031146..8031711 | 193..758 | 100 | -> | Plus |
3R | 8031782..8032145 | 759..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8030829..8030982 | 1..154 | 100 | -> | Plus |
3R | 8031046..8031083 | 155..192 | 100 | -> | Plus |
3R | 8031146..8031711 | 193..758 | 100 | -> | Plus |
3R | 8031782..8032145 | 759..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8030829..8030982 | 1..154 | 100 | -> | Plus |
3R | 8031046..8031083 | 155..192 | 100 | -> | Plus |
3R | 8031146..8031711 | 193..758 | 100 | -> | Plus |
3R | 8031782..8032145 | 759..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 3856551..3856704 | 1..154 | 100 | -> | Plus |
arm_3R | 3856768..3856805 | 155..192 | 100 | -> | Plus |
arm_3R | 3856868..3857433 | 193..758 | 100 | -> | Plus |
arm_3R | 3857504..3857867 | 759..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7771977..7772542 | 193..758 | 100 | -> | Plus |
3R | 7772613..7772976 | 759..1122 | 100 | Plus | |
3R | 7771660..7771813 | 1..154 | 100 | -> | Plus |
3R | 7771877..7771914 | 155..192 | 100 | -> | Plus |
Translation from 115 to 945
> RE22146.hyp MARRPEHSAPPEIFYNDDEAKKYSTNTRIIEIQVEMAERALELLALPDDD ESRLILDIGCGSGLSGSVLEDSEHMWIGIDISKSMLDIAVEREVAGDVIL GDMGEGMPFKPGTFDGAISISALQWLCNADKSYHNPHKRLLKFFTTLFSC LTRTARAVFQFYPENSDQIEMVTSQAMKAGFYGGLVVDYPNSAKAKKYYL VLMTGGSAELPQALGSPEEERRVNYIKKRDACREARGKAPKKSRDWILAK KERRRRQGLETRPDTKYTARKRSGKF*
Translation from 115 to 945
> RE22146.pep MARRPEHSAPPEIFYNDDEAKKYSTNTRIIEIQVEMAERALELLALPDDD ESRLILDIGCGSGLSGSVLEDSEHMWIGIDISKSMLDIAVEREVAGDVIL GDMGEGMPFKPGTFDGAISISALQWLCNADKSYHNPHKRLLKFFTTLFSC LTRTARAVFQFYPENSDQIEMVTSQAMKAGFYGGLVVDYPNSAKAKKYYL VLMTGGSAELPQALGSPEEERRVNYIKKRDACREARGKAPKKSRDWILAK KERRRRQGLETRPDTKYTARKRSGKF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18155-PA | 276 | GF18155-PA | 1..276 | 1..276 | 1464 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14363-PA | 276 | GG14363-PA | 1..276 | 1..276 | 1468 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17335-PA | 276 | GH17335-PA | 1..276 | 1..276 | 1435 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10903-PB | 276 | CG10903-PB | 1..276 | 1..276 | 1433 | 100 | Plus |
CG10903-PA | 276 | CG10903-PA | 1..276 | 1..276 | 1433 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10260-PA | 276 | GI10260-PA | 1..276 | 1..276 | 1426 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21481-PA | 277 | GL21481-PA | 1..277 | 1..276 | 1425 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10628-PA | 277 | GA10628-PA | 1..277 | 1..276 | 1432 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10995-PA | 276 | GM10995-PA | 1..276 | 1..276 | 1466 | 99.3 | Plus |
Dsec\GM19349-PA | 166 | GM19349-PA | 1..164 | 1..164 | 822 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19965-PA | 276 | GD19965-PA | 1..276 | 1..276 | 1466 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11066-PA | 276 | GJ11066-PA | 1..276 | 1..276 | 1445 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13473-PA | 276 | GK13473-PA | 1..276 | 1..276 | 1410 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24963-PA | 276 | GE24963-PA | 1..276 | 1..276 | 1459 | 98.6 | Plus |