RE22192.complete Sequence
1305 bp (1305 high quality bases) assembled on 2002-03-28
GenBank Submission: AY094861
> RE22192.complete
TCAGTTAGAGTCCGCCTTTTGTGGTGATCACTGCTCGAACACCCGAACAT
GACGCGATCTTCGCCAGCTTGGTGTGCTGGCCAGGCCTGGCTCGTCTGGC
TTTTGGCATCCATCTGGATACGCACGTGTCTCGCGCAATTTGCAGTCTCC
TCGTCCTCCGCCGGCGGAGCTGTTGCCTCCGCCGGTGGCGTCACTGTGGT
GGCCCAGCTGCCCGGTTTCGGAGTTATCAATGGACTGATCAATGCCATGC
ACAACAACAACCGCTTCAACCAGCAGCCGCAGTTCGAGAGACTGCAGCAA
GGAAGGCCGGGGATGGGTCCGAATCGAGGAGGAATGCACAGACCAGGATT
TGCACCACCCAACCGTCAGCAACCGACGCCTCCTGGCTGGCCACCCGGCT
GGCAGTGGGGAGCCGGTGGAAATCAGAATCAACCCGGATTTGACTGGGTT
CAAACAGGATTTGCACCAGGCTGGAATGGAGGTGGAGGGCAAGGACCAGG
ATGGAATGGTCCAGGATGGAACGGAGGCGGTGGAAGAGGACCTCCACCAA
GACCAGGTTTTAACGGCGGCGGACCACCGCCGCCAAGACCAGGATGGAAC
GGCGGCGGGCCACCACCACCGATGCCAGGCTGGAATGGAGGAGGGCCACC
GCCACCAAGGCCAGGATGGAATGGCGGAGGACCTCCGCCACCAAGGCCAG
GCTGGAATGGAGGGATGGAACAGGAATGGGATAACTATCCACGCCTCCCC
GATCAGCCGGATCCCAATGATCCAAACACGAATTGGAATCCAGATAATGA
GTCTAGCACCACTCCACAAACGCCAATACCAGGACCCATCTTTCCAACGA
CAACACCTAAGCCAGAGCCCACCTTTCCCACGATCCAGCCACGTCCAACC
GCTCAGCCAACGAAGGATACGCTCATAATAGGAACCAATCGACCGCCGTT
GGTGCCGCCCCATAATCCGGATCCACCCACGCCCACTTTTCCCACTTGGA
TCGTGCCGGAGCCATTGCCAAAACCATTGGACGAACTCTCCGAAAATCGT
GCTATTATATTCCCCAGCTCTAGCAAATATATCCATGTGCCAAACCCGGA
GGTTCCCTCAATTCCCATTGATGTGAGACGAAGATGAATCTTCTAAGAGG
GAGTTCCCCGATTCACACTTGTTGTATATATATTCGTAGACCATTGTTCA
ATTGCTCCACCCGAGATCGTCTTTGTCATAAGTTCAAAACAGGTTCTAAA
AGCTCGTTGGAAATAAACGAAATTTTAATAAATTAAAAAACAAAAAAAAA
AAAAA
RE22192.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:18:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7016-RA | 1285 | CG7016-RA | 2..1285 | 1..1284 | 6420 | 100 | Plus |
CG13641-RA | 687 | CG13641-RA | 564..687 | 1285..1162 | 620 | 100 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:06:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 20686119..20687403 | 1..1285 | 6425 | 100 | Plus |
chr3R | 27901430 | chr3R | 20686694..20686828 | 540..674 | 330 | 83 | Plus |
chr3R | 27901430 | chr3R | 20686658..20686792 | 576..710 | 330 | 83 | Plus |
chr3R | 27901430 | chr3R | 20686658..20686759 | 612..713 | 210 | 80.4 | Plus |
chr3R | 27901430 | chr3R | 20686730..20686831 | 540..641 | 210 | 80.4 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:42:06 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:06:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24862933..24864217 | 1..1285 | 6425 | 100 | Plus |
3R | 32079331 | 3R | 24863472..24863606 | 576..710 | 330 | 83 | Plus |
3R | 32079331 | 3R | 24863508..24863642 | 540..674 | 330 | 83 | Plus |
3R | 32079331 | 3R | 24863472..24863573 | 612..713 | 210 | 80.4 | Plus |
3R | 32079331 | 3R | 24863544..24863645 | 540..641 | 210 | 80.4 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:48:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 24603764..24605048 | 1..1285 | 6425 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 21:06:07 has no hits.
RE22192.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:07:08 Download gff for
RE22192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 20686119..20687412 | 1..1291 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:02:16 Download gff for
RE22192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7016-RA | 1..1089 | 49..1137 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:23:44 Download gff for
RE22192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7016-RA | 1..1089 | 49..1137 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:32:15 Download gff for
RE22192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7016-RA | 1..1089 | 49..1137 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:59:56 Download gff for
RE22192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7016-RA | 1..1089 | 49..1137 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:04:55 Download gff for
RE22192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7016-RA | 1..1089 | 49..1137 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:50:36 Download gff for
RE22192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7016-RA | 2..1285 | 1..1284 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:23:44 Download gff for
RE22192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7016-RA | 2..1285 | 1..1284 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:32:15 Download gff for
RE22192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7016-RA | 3..1286 | 1..1284 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:59:56 Download gff for
RE22192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7016-RA | 2..1285 | 1..1284 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:04:55 Download gff for
RE22192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7016-RA | 3..1286 | 1..1284 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:07:08 Download gff for
RE22192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24862933..24864226 | 1..1291 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:07:08 Download gff for
RE22192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24862933..24864226 | 1..1291 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:07:08 Download gff for
RE22192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24862933..24864226 | 1..1291 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:32:15 Download gff for
RE22192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20688655..20689948 | 1..1291 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:32:53 Download gff for
RE22192.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24603764..24605057 | 1..1291 | 99 | | Plus |
RE22192.hyp Sequence
Translation from 48 to 1136
> RE22192.hyp
MTRSSPAWCAGQAWLVWLLASIWIRTCLAQFAVSSSSAGGAVASAGGVTV
VAQLPGFGVINGLINAMHNNNRFNQQPQFERLQQGRPGMGPNRGGMHRPG
FAPPNRQQPTPPGWPPGWQWGAGGNQNQPGFDWVQTGFAPGWNGGGGQGP
GWNGPGWNGGGGRGPPPRPGFNGGGPPPPRPGWNGGGPPPPMPGWNGGGP
PPPRPGWNGGGPPPPRPGWNGGMEQEWDNYPRLPDQPDPNDPNTNWNPDN
ESSTTPQTPIPGPIFPTTTPKPEPTFPTIQPRPTAQPTKDTLIIGTNRPP
LVPPHNPDPPTPTFPTWIVPEPLPKPLDELSENRAIIFPSSSKYIHVPNP
EVPSIPIDVRRR*
RE22192.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:22:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7016-PA | 362 | CG7016-PA | 1..362 | 1..362 | 2129 | 100 | Plus |
CG9425-PD | 2103 | CG9425-PD | 1292..1520 | 83..322 | 217 | 31.9 | Plus |
CG9425-PC | 2103 | CG9425-PC | 1292..1520 | 83..322 | 217 | 31.9 | Plus |
CG9425-PB | 2103 | CG9425-PB | 1292..1520 | 83..322 | 217 | 31.9 | Plus |
CG15021-PA | 420 | CG15021-PA | 117..371 | 91..326 | 207 | 31.7 | Plus |
RE22192.pep Sequence
Translation from 48 to 1136
> RE22192.pep
MTRSSPAWCAGQAWLVWLLASIWIRTCLAQFAVSSSSAGGAVASAGGVTV
VAQLPGFGVINGLINAMHNNNRFNQQPQFERLQQGRPGMGPNRGGMHRPG
FAPPNRQQPTPPGWPPGWQWGAGGNQNQPGFDWVQTGFAPGWNGGGGQGP
GWNGPGWNGGGGRGPPPRPGFNGGGPPPPRPGWNGGGPPPPMPGWNGGGP
PPPRPGWNGGGPPPPRPGWNGGMEQEWDNYPRLPDQPDPNDPNTNWNPDN
ESSTTPQTPIPGPIFPTTTPKPEPTFPTIQPRPTAQPTKDTLIIGTNRPP
LVPPHNPDPPTPTFPTWIVPEPLPKPLDELSENRAIIFPSSSKYIHVPNP
EVPSIPIDVRRR*
RE22192.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:09:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF16998-PA | 340 | GF16998-PA | 1..130 | 1..135 | 227 | 56.3 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:09:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG11328-PA | 370 | GG11328-PA | 1..370 | 1..360 | 916 | 79.1 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7016-PA | 362 | CG7016-PA | 1..362 | 1..362 | 2129 | 100 | Plus |
CG9425-PD | 2103 | CG9425-PD | 1292..1520 | 83..322 | 217 | 31.9 | Plus |
CG9425-PC | 2103 | CG9425-PC | 1292..1520 | 83..322 | 217 | 31.9 | Plus |
CG9425-PB | 2103 | CG9425-PB | 1292..1520 | 83..322 | 217 | 31.9 | Plus |
CG15021-PA | 420 | CG15021-PA | 117..371 | 91..326 | 207 | 31.7 | Plus |
CG15021-PA | 420 | CG15021-PA | 31..248 | 123..326 | 200 | 31.9 | Plus |
dia-PE | 1091 | CG1768-PE | 518..609 | 155..250 | 197 | 46.1 | Plus |
dia-PB | 1091 | CG1768-PB | 518..609 | 155..250 | 197 | 46.1 | Plus |
dia-PA | 1091 | CG1768-PA | 518..609 | 155..250 | 197 | 46.1 | Plus |
dia-PD | 1098 | CG1768-PD | 525..616 | 155..250 | 197 | 46.1 | Plus |
ena-PG | 664 | CG15112-PG | 288..466 | 46..226 | 193 | 34.6 | Plus |
ena-PE | 684 | CG15112-PE | 308..486 | 46..226 | 193 | 34.6 | Plus |
ena-PC | 684 | CG15112-PC | 308..486 | 46..226 | 193 | 34.6 | Plus |
ena-PA | 684 | CG15112-PA | 308..486 | 46..226 | 193 | 34.6 | Plus |
ena-PD | 687 | CG15112-PD | 311..489 | 46..226 | 193 | 34.6 | Plus |
frm-PJ | 752 | CG10625-PJ | 85..325 | 109..359 | 193 | 32.2 | Plus |
frm-PI | 766 | CG10625-PI | 85..325 | 109..359 | 193 | 32.2 | Plus |
ena-PB | 834 | CG15112-PB | 457..635 | 46..226 | 193 | 34.6 | Plus |
ena-PF | 980 | CG15112-PF | 604..782 | 46..226 | 193 | 34.6 | Plus |
frm-PH | 1180 | CG10625-PH | 499..739 | 109..359 | 193 | 32.2 | Plus |
CG15021-PA | 420 | CG15021-PA | 54..237 | 88..326 | 191 | 28 | Plus |
osa-PE | 2555 | CG7467-PE | 156..419 | 87..322 | 190 | 29.3 | Plus |
osa-PC | 2556 | CG7467-PC | 156..419 | 87..322 | 190 | 29.3 | Plus |
osa-PF | 2559 | CG7467-PF | 156..419 | 87..322 | 190 | 29.3 | Plus |
osa-PA | 2703 | CG7467-PA | 156..419 | 87..322 | 190 | 29.3 | Plus |
osa-PB | 2716 | CG7467-PB | 156..419 | 87..322 | 190 | 29.3 | Plus |
osa-PD | 2716 | CG7467-PD | 156..419 | 87..322 | 190 | 29.3 | Plus |
frm-PJ | 752 | CG10625-PJ | 102..396 | 88..326 | 182 | 33.3 | Plus |
frm-PI | 766 | CG10625-PI | 102..396 | 88..326 | 182 | 33.3 | Plus |
frm-PH | 1180 | CG10625-PH | 516..810 | 88..326 | 182 | 33.3 | Plus |
frm-PE | 652 | CG10625-PE | 414..644 | 39..307 | 182 | 30.5 | Plus |
CG10555-PB | 926 | CG10555-PB | 420..717 | 74..312 | 179 | 27.5 | Plus |
CG10555-PA | 926 | CG10555-PA | 420..717 | 74..312 | 179 | 27.5 | Plus |
CG15021-PA | 420 | CG15021-PA | 44..192 | 150..327 | 178 | 34.4 | Plus |
Rb97D-PI | 471 | CG6354-PI | 212..459 | 62..352 | 176 | 28.3 | Plus |
Rb97D-PF | 471 | CG6354-PF | 212..459 | 62..352 | 176 | 28.3 | Plus |
Rb97D-PB | 471 | CG6354-PB | 212..459 | 62..352 | 176 | 28.3 | Plus |
Rb97D-PH | 471 | CG6354-PH | 212..459 | 62..352 | 176 | 28.3 | Plus |
CG15021-PA | 420 | CG15021-PA | 165..411 | 99..344 | 175 | 28.7 | Plus |
frm-PD | 268 | CG10625-PD | 85..260 | 109..307 | 175 | 33.2 | Plus |
frm-PA | 268 | CG10625-PA | 85..260 | 109..307 | 175 | 33.2 | Plus |
frm-PB | 682 | CG10625-PB | 499..674 | 109..307 | 175 | 33.2 | Plus |
frm-PC | 682 | CG10625-PC | 499..674 | 109..307 | 175 | 33.2 | Plus |
CG9411-PA | 993 | CG9411-PA | 431..628 | 161..326 | 174 | 30.2 | Plus |
BOD1-PC | 1109 | CG5514-PC | 358..480 | 200..328 | 173 | 35.6 | Plus |
BOD1-PA | 1109 | CG5514-PA | 358..480 | 200..328 | 173 | 35.6 | Plus |
BOD1-PD | 1150 | CG5514-PD | 358..480 | 200..328 | 173 | 35.6 | Plus |
BOD1-PB | 1150 | CG5514-PB | 358..480 | 200..328 | 173 | 35.6 | Plus |
BOD1-PE | 1151 | CG5514-PE | 358..480 | 200..328 | 173 | 35.6 | Plus |
Rb97D-PG | 465 | CG6354-PG | 212..453 | 62..352 | 169 | 28.5 | Plus |
Rb97D-PC | 465 | CG6354-PC | 212..453 | 62..352 | 169 | 28.5 | Plus |
Rb97D-PA | 465 | CG6354-PA | 212..453 | 62..352 | 169 | 28.5 | Plus |
BOD1-PC | 1109 | CG5514-PC | 359..489 | 165..326 | 168 | 31.5 | Plus |
BOD1-PA | 1109 | CG5514-PA | 359..489 | 165..326 | 168 | 31.5 | Plus |
BOD1-PD | 1150 | CG5514-PD | 359..489 | 165..326 | 168 | 31.5 | Plus |
BOD1-PB | 1150 | CG5514-PB | 359..489 | 165..326 | 168 | 31.5 | Plus |
BOD1-PE | 1151 | CG5514-PE | 359..489 | 165..326 | 168 | 31.5 | Plus |
BG642163-PB | 415 | CG34102-PB | 136..335 | 99..311 | 168 | 28.1 | Plus |
BG642163-PA | 415 | CG34102-PA | 136..335 | 99..311 | 168 | 28.1 | Plus |
capu-PG | 932 | CG3399-PG | 376..539 | 165..332 | 168 | 32.8 | Plus |
capu-PB | 1049 | CG3399-PB | 493..656 | 165..332 | 168 | 32.8 | Plus |
capu-PA | 1059 | CG3399-PA | 503..666 | 165..332 | 168 | 32.8 | Plus |
capu-PJ | 1089 | CG3399-PJ | 533..696 | 165..332 | 168 | 32.8 | Plus |
dia-PE | 1091 | CG1768-PE | 519..584 | 145..203 | 164 | 54.5 | Plus |
dia-PB | 1091 | CG1768-PB | 519..584 | 145..203 | 164 | 54.5 | Plus |
dia-PA | 1091 | CG1768-PA | 519..584 | 145..203 | 164 | 54.5 | Plus |
dia-PD | 1098 | CG1768-PD | 526..591 | 145..203 | 164 | 54.5 | Plus |
ena-PG | 664 | CG15112-PG | 317..476 | 99..264 | 162 | 35.2 | Plus |
ena-PE | 684 | CG15112-PE | 337..496 | 99..264 | 162 | 35.2 | Plus |
ena-PC | 684 | CG15112-PC | 337..496 | 99..264 | 162 | 35.2 | Plus |
ena-PA | 684 | CG15112-PA | 337..496 | 99..264 | 162 | 35.2 | Plus |
ena-PD | 687 | CG15112-PD | 340..499 | 99..264 | 162 | 35.2 | Plus |
ena-PB | 834 | CG15112-PB | 486..645 | 99..264 | 162 | 35.2 | Plus |
ena-PF | 980 | CG15112-PF | 633..792 | 99..264 | 162 | 35.2 | Plus |
dia-PE | 1091 | CG1768-PE | 496..585 | 158..274 | 158 | 38.7 | Plus |
dia-PB | 1091 | CG1768-PB | 496..585 | 158..274 | 158 | 38.7 | Plus |
dia-PA | 1091 | CG1768-PA | 496..585 | 158..274 | 158 | 38.7 | Plus |
dia-PD | 1098 | CG1768-PD | 503..592 | 158..274 | 158 | 38.7 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 05:09:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI10570-PA | 418 | GI10570-PA | 185..417 | 140..362 | 152 | 39 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 05:09:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL13938-PA | 367 | GL13938-PA | 248..367 | 241..361 | 170 | 51.6 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 05:09:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA20034-PA | 362 | GA20034-PA | 178..362 | 165..361 | 206 | 47.3 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:09:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM26637-PA | 364 | GM26637-PA | 1..145 | 1..145 | 553 | 93.8 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 05:09:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD21140-PA | 262 | GD21140-PA | 1..35 | 1..35 | 183 | 91.4 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:09:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE23524-PA | 367 | GE23524-PA | 1..141 | 1..136 | 419 | 77.3 | Plus |