BDGP Sequence Production Resources |
Search the DGRC for RE22286
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 222 |
Well: | 86 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Pex14-RA |
Protein status: | RE22286.pep: gold |
Preliminary Size: | 1176 |
Sequenced Size: | 1269 |
Gene | Date | Evidence |
---|---|---|
CG4289 | 2002-01-01 | Sim4 clustering to Release 2 |
CG4289 | 2002-02-22 | Blastp of sequenced clone |
CG4289 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4289 | 2008-04-29 | Release 5.5 accounting |
CG4289 | 2008-08-15 | Release 5.9 accounting |
CG4289 | 2008-12-18 | 5.12 accounting |
1269 bp (1269 high quality bases) assembled on 2002-02-22
GenBank Submission: AY089608
> RE22286.complete AGTAATTTCGAGAGCAGCAAAGTCTTTGGTCACACTTTTGTTTTTGTGCA CTTTGTAATCGAATTGCTCGTGAATTCGGATTCACTCCGTTTTCGTGTGT ATTAGCTAGGCAAGATTGAATTAAGAGTCGATATACAGATGTCCAGCAAC AACACGGACACTGGGGACACCACCGTCATGGCGACGGCTACCTCGGTGCA GAACGATGTCGAGGCCGGCGTAGATGAGCAATTGCCTCGAGAATCGCTGA TAACCACTGCAGTCAGTTTTCTACAAAACACCAAGGTGCGCCACACGACA CTTATCCAGAAGCAGCAGTTCCTACGGTCCAAAGGTCTCACCGCTCACGA AATTCAGCTGGCCTGTGAACGGGCCGGCGTTTTCACCCAAGACCCCAACA AGCCCAATCCGAATCCGAACACCGTCATTAGCATTGGATCCCAATTGCAC GCGCTGCAGCCGCAGCCGACTGTCTTGGGCCGGATCAGGGAAATCATCCA TTCGGCAGCCCTGTTCAGCGGAGTCGTCTACGCAGTCTACATCTTCTGGA AGCAATACATTGCGCCCTACCTGTTCGGCAAGTCCAAGAAGAAGGCGGTC GATGAAGTCCTGGACGACATAGACAAGAAGGTAGAGACCCGCACCAACGA CCTCAACAAGGAGATTTTGGCGGTCAGGGATCTGATCACCACACAGCAAA GGGAACACGCCCAGCAGCTGAACCGCGAATTTAGTAACTTCCGTAGCGAT CTGGATGCCATTAAGGGCCTGCTTTTGAACCGAAAACAGTTCGCCGGCCC TGTGGCTCCGATCGCAGTGCCATCCATTCCCGCCTGGCAATTGGCCGGCT CACCGCATCACCATCACCGGCACAGCGGGTCGGACGACAACGAGAAGGGC GATGATGCTGGATCCGGGTCTGGCTCGTCGGAGACAGAGGTGGTCACCAA GAATAGTGACTCCAGCTTGGAGATCATGTAATGCAATCAGAATACGAGGC TGGCTATATAGACGTAGTATATAGTTACGCTGTAAATTGAGTTTCCCCGT TAAATGCCTTCAAGACTTTTGGTTTTTTTTCTTTGCGTTTATAGCATTTA AGGTTTCTTTATAGTCAACAGCTAATCCATATCCAAAAGTACATACACAC ACTCACATATACACACTTATGCGATACGATGTCTATACAATGTAATAATA AAAAGTTTACATAATAACAGGTTTGAATTGAAAGAAACTGTTTAATTAAG CCCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 20768696..20769396 | 551..1251 | 3505 | 100 | Plus |
chr3L | 24539361 | chr3L | 20768118..20768425 | 245..552 | 1510 | 99.4 | Plus |
chr3L | 24539361 | chr3L | 20767815..20768067 | 1..253 | 1250 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 20779676..20780383 | 551..1258 | 3525 | 99.9 | Plus |
3L | 28110227 | 3L | 20779098..20779405 | 245..552 | 1525 | 99.7 | Plus |
3L | 28110227 | 3L | 20778795..20779047 | 1..253 | 1250 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 20772776..20773483 | 551..1258 | 3525 | 99.8 | Plus |
3L | 28103327 | 3L | 20772198..20772505 | 245..552 | 1525 | 99.6 | Plus |
3L | 28103327 | 3L | 20771895..20772147 | 1..253 | 1250 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 3639..3740 | 1134..1235 | 121 | 62.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 20767815..20768063 | 1..249 | 100 | -> | Plus |
chr3L | 20768123..20768425 | 250..552 | 99 | -> | Plus |
chr3L | 20768698..20769398 | 553..1253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4289-RA | 1..843 | 139..981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4289-RA | 1..843 | 139..981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pex14-RA | 1..843 | 139..981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4289-RA | 1..843 | 139..981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pex14-RA | 1..843 | 139..981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4289-RA | 1..1253 | 1..1253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4289-RA | 1..1253 | 1..1253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pex14-RA | 1..1249 | 5..1253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4289-RA | 1..1253 | 1..1253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pex14-RA | 1..1249 | 5..1253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20778795..20779043 | 1..249 | 100 | -> | Plus |
3L | 20779103..20779405 | 250..552 | 100 | -> | Plus |
3L | 20779678..20780378 | 553..1253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20778795..20779043 | 1..249 | 100 | -> | Plus |
3L | 20779103..20779405 | 250..552 | 100 | -> | Plus |
3L | 20779678..20780378 | 553..1253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20778795..20779043 | 1..249 | 100 | -> | Plus |
3L | 20779103..20779405 | 250..552 | 100 | -> | Plus |
3L | 20779678..20780378 | 553..1253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 20771895..20772143 | 1..249 | 100 | -> | Plus |
arm_3L | 20772203..20772505 | 250..552 | 100 | -> | Plus |
arm_3L | 20772778..20773478 | 553..1253 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20771895..20772143 | 1..249 | 100 | -> | Plus |
3L | 20772203..20772505 | 250..552 | 100 | -> | Plus |
3L | 20772778..20773478 | 553..1253 | 99 | Plus |
Translation from 138 to 980
> RE22286.hyp MSSNNTDTGDTTVMATATSVQNDVEAGVDEQLPRESLITTAVSFLQNTKV RHTTLIQKQQFLRSKGLTAHEIQLACERAGVFTQDPNKPNPNPNTVISIG SQLHALQPQPTVLGRIREIIHSAALFSGVVYAVYIFWKQYIAPYLFGKSK KKAVDEVLDDIDKKVETRTNDLNKEILAVRDLITTQQREHAQQLNREFSN FRSDLDAIKGLLLNRKQFAGPVAPIAVPSIPAWQLAGSPHHHHRHSGSDD NEKGDDAGSGSGSSETEVVTKNSDSSLEIM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pex14-PA | 280 | CG4289-PA | 1..280 | 1..280 | 1432 | 100 | Plus |
Translation from 138 to 980
> RE22286.pep MSSNNTDTGDTTVMATATSVQNDVEAGVDEQLPRESLITTAVSFLQNTKV RHTTLIQKQQFLRSKGLTAHEIQLACERAGVFTQDPNKPNPNPNTVISIG SQLHALQPQPTVLGRIREIIHSAALFSGVVYAVYIFWKQYIAPYLFGKSK KKAVDEVLDDIDKKVETRTNDLNKEILAVRDLITTQQREHAQQLNREFSN FRSDLDAIKGLLLNRKQFAGPVAPIAVPSIPAWQLAGSPHHHHRHSGSDD NEKGDDAGSGSGSSETEVVTKNSDSSLEIM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10360-PA | 281 | GF10360-PA | 1..281 | 1..280 | 1267 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16136-PA | 280 | GG16136-PA | 1..280 | 1..280 | 1391 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14592-PA | 280 | GH14592-PA | 1..280 | 1..280 | 1080 | 75.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pex14-PA | 280 | CG4289-PA | 1..280 | 1..280 | 1432 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13414-PA | 280 | GI13414-PA | 27..280 | 22..280 | 1028 | 76.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12812-PA | 246 | GL12812-PA | 1..246 | 1..280 | 974 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18085-PA | 278 | GA18085-PA | 1..278 | 1..280 | 1180 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22319-PA | 280 | GM22319-PA | 1..280 | 1..280 | 1425 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14907-PA | 280 | GD14907-PA | 1..280 | 1..280 | 1449 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11539-PA | 280 | GJ11539-PA | 1..280 | 1..280 | 1118 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24516-PA | 283 | GK24516-PA | 1..283 | 1..280 | 1072 | 74.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19703-PA | 280 | GE19703-PA | 1..280 | 1..280 | 1363 | 94.3 | Plus |