BDGP Sequence Production Resources |
Search the DGRC for RE22570
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 225 |
Well: | 70 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG40191-RB |
Protein status: | RE22570.pep: gold |
Sequenced Size: | 1590 |
Gene | Date | Evidence |
---|---|---|
CG40191 | 2004-10-13 | Blastp of sequenced clone |
CG40191 | 2008-04-29 | Release 5.5 accounting |
CG40191 | 2008-08-15 | Release 5.9 accounting |
CG40191 | 2008-12-18 | 5.12 accounting |
1590 bp (1590 high quality bases) assembled on 2004-10-13
GenBank Submission: BT016014
> RE22570.complete ATTGGTTTTTTTTATAGGACTAAATAGTTTTATTTTCGCATATTTCAGTT ATTTATTTAGAAATGGGGCGATTTAAGTTATGTGCTTCGCCGAGAGAGGT ATTTAAAAAGTTTTCACGAATATATGTATTAGCAAATTTTTTAAATTTCC AGGTTATGAAGTACGAAGACTTTATAAAACGCATTCGAAAAAGCCTCTAC TATGGCGTTGGAACACCAGACACAGAAATGTCGGTCTCCTTACCCTTTGC GGAGTACGCGGCAGATTTGTTTTCGGAGACTCATCGCGGGCATTCTTTGC ATCGCCTAAGTTGCGTATCTGCTGCACAAGTACATGCCACGCCTTGCTCT TTAATTATGGCATTGATATACCTCGATCGCTTAAACGTCATCGACTCGGG CTATAGCTGCAGAATCACACCACAGCAGCTGTTTGTTGTGTCACTAATGA TTTCCACAAAATTCTACGCGGGCCACGACGAACGGTTCTATCTGGAAGAC TGGGCCAGTGACGCTTGTATGACGGAAGATAGGCTCAAGGCAGTCGAGCT CGAATTTCTTTCCGCTATGGGTTGGAATATATACATATCCAATGAGCTAT TCTTTGATAAGTTAAGAAACGTTGAACGTTCTTTGGCTGAACAGCAGGGA CTGCGTAGAGGTTGGCTCACTTACAGTGAGCTCGTGCAGTTGCTGCCTAG CCTTGAATGGACGAAATTCCTCGTTAACAGCCTGTCTGTACTATCTCTAA GCTATGCGGCAAGTATTATAACATTAGCCGGAGCTTTTTTTATTGCGAGC CAAGTTCCCGGTACGTTATGGCATCGGGATGTGGAAACTGCCTCAGATTT CACCATGACAATTAGCAGTCAGGTATCCGTTTCAAATGCATTAGAGTCCA CACCTTTTATTAATGTCCAAGTATCCTCACTTTTACGTAAAACGAGTAAC GTGAATGTTGAATTGATGAATCTTGAGAAGACAAGCTGCGCCAGGGCAAG ACTGAATAAAATTGAATATAAGCATCCGCGCCATCAATCAGTACCTACGC TTTCATTCATAAGCACCTGTCCACAACTTGATTTATTGTATGCCCAAGAT GGAACAAGGAATTGGCTAAATATTAAATCGCCCAACAGCGACTACAAAAA CAACAGAAACCTTTCAATAACAGTTAGATCCGTACAACTAGAAGAGCAAA AGGCTGAAAATGATTCCGTTATTTGGCAAGCCAACACCGAAGCAATGCAG TAATTGTTTTTACCGCAAAACTTAAAGAGGTGCTAACAACTGATATAAAA TAAATATATTTATATTATATATAATATCAATATAATAATATTGATAACAA ATTAACCAAGCGTACGAGTAATATAACATGCATAACAGTAATACGAAACT GCTTTTATTTCTTCACAGAACTAATGTTCGCTGGCTTAATCAAACTGTCA TAAAAACTATAATAGCACATTATTATATGTGCCTAGAGGTGGATACTTTG GATGCTAAACTAAAATGAACAAAATAAGTTAGATTGTTCTATATTATATT AAAATAAAATGTTTCTGTTGCTCCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG40191-RB | 1640 | CG40191-RB | 13..1582 | 4..1573 | 7850 | 100 | Plus |
CG40191.f | 1836 | CG40191.f | 13..1582 | 4..1573 | 7850 | 100 | Plus |
CG40191-RA | 1636 | CG40191-RA | 120..1542 | 151..1573 | 7115 | 100 | Plus |
CG40191-RA | 1636 | CG40191-RA | 27..123 | 4..100 | 485 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2RHet | 3288813 | chr2RHet | 392020..393024 | 569..1573 | 5025 | 100 | Plus |
chr2RHet | 3288813 | chr2RHet | 391077..391519 | 4..446 | 2215 | 100 | Plus |
chr2RHet | 3288813 | chr2RHet | 391849..391972 | 447..570 | 620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2RHet | 391074..391519 | 1..446 | 99 | -> | Plus |
chr2RHet | 391849..391971 | 447..569 | 100 | -> | Plus |
chr2RHet | 392021..393024 | 570..1574 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RB | 1..1191 | 63..1253 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RB | 1..1191 | 63..1253 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RB | 1..1191 | 63..1253 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RB | 1..1191 | 63..1253 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RB | 1..1191 | 63..1253 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RB | 1..1573 | 1..1574 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RB | 24..1596 | 1..1574 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RB | 4..1576 | 1..1574 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RB | 1..1573 | 1..1574 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG40191-RB | 4..1576 | 1..1574 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 1264396..1264841 | 1..446 | 99 | -> | Plus |
2R | 1265171..1265293 | 447..569 | 100 | -> | Plus |
2R | 1265343..1266346 | 570..1574 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 1264396..1264841 | 1..446 | 99 | -> | Plus |
2R | 1265171..1265293 | 447..569 | 100 | -> | Plus |
2R | 1265343..1266346 | 570..1574 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 1264396..1264841 | 1..446 | 99 | -> | Plus |
2R | 1265171..1265293 | 447..569 | 100 | -> | Plus |
2R | 1265343..1266346 | 570..1574 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2RHet | 391029..391474 | 1..446 | 99 | -> | Plus |
2RHet | 391804..391926 | 447..569 | 100 | -> | Plus |
2RHet | 391976..392979 | 570..1574 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 1265171..1265293 | 447..569 | 100 | -> | Plus |
2R | 1264396..1264841 | 1..446 | 99 | -> | Plus |
2R | 1265343..1266346 | 570..1574 | 99 | Plus |
Translation from 62 to 1252
> RE22570.pep MGRFKLCASPREVFKKFSRIYVLANFLNFQVMKYEDFIKRIRKSLYYGVG TPDTEMSVSLPFAEYAADLFSETHRGHSLHRLSCVSAAQVHATPCSLIMA LIYLDRLNVIDSGYSCRITPQQLFVVSLMISTKFYAGHDERFYLEDWASD ACMTEDRLKAVELEFLSAMGWNIYISNELFFDKLRNVERSLAEQQGLRRG WLTYSELVQLLPSLEWTKFLVNSLSVLSLSYAASIITLAGAFFIASQVPG TLWHRDVETASDFTMTISSQVSVSNALESTPFINVQVSSLLRKTSNVNVE LMNLEKTSCARARLNKIEYKHPRHQSVPTLSFISTCPQLDLLYAQDGTRN WLNIKSPNSDYKNNRNLSITVRSVQLEEQKAENDSVIWQANTEAMQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22743-PA | 446 | GF22743-PA | 76..431 | 31..396 | 1024 | 56.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10916-PA | 378 | GG10916-PA | 1..378 | 1..396 | 1672 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10974-PA | 406 | GH10974-PA | 15..389 | 30..395 | 931 | 53.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG40191-PB | 396 | CG40191-PB | 1..396 | 1..396 | 2032 | 100 | Plus |
CG40191-PC | 378 | CG40191-PC | 1..378 | 1..396 | 1912 | 95.5 | Plus |
CG40191-PD | 378 | CG40191-PD | 1..378 | 1..396 | 1912 | 95.5 | Plus |
CG40191-PA | 378 | CG40191-PA | 1..378 | 1..396 | 1912 | 95.5 | Plus |
CG40191-PE | 268 | CG40191-PE | 1..268 | 129..396 | 1371 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17487-PA | 396 | GI17487-PA | 13..379 | 30..395 | 978 | 55.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26163-PA | 408 | GL26163-PA | 11..393 | 30..396 | 1098 | 56.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25313-PA | 408 | GA25313-PA | 11..393 | 30..396 | 1098 | 56.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24773-PA | 277 | GM24773-PA | 13..277 | 129..396 | 1261 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15142-PA | 378 | GD15142-PA | 1..378 | 1..396 | 1865 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15088-PA | 391 | GJ15088-PA | 2..374 | 30..395 | 983 | 55.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15339-PA | 388 | GK15339-PA | 1..372 | 14..360 | 1054 | 55.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15212-PA | 380 | GE15212-PA | 1..380 | 1..396 | 1637 | 77.9 | Plus |
Translation from 62 to 1252
> RE22570.hyp MGRFKLCASPREVFKKFSRIYVLANFLNFQVMKYEDFIKRIRKSLYYGVG TPDTEMSVSLPFAEYAADLFSETHRGHSLHRLSCVSAAQVHATPCSLIMA LIYLDRLNVIDSGYSCRITPQQLFVVSLMISTKFYAGHDERFYLEDWASD ACMTEDRLKAVELEFLSAMGWNIYISNELFFDKLRNVERSLAEQQGLRRG WLTYSELVQLLPSLEWTKFLVNSLSVLSLSYAASIITLAGAFFIASQVPG TLWHRDVETASDFTMTISSQVSVSNALESTPFINVQVSSLLRKTSNVNVE LMNLEKTSCARARLNKIEYKHPRHQSVPTLSFISTCPQLDLLYAQDGTRN WLNIKSPNSDYKNNRNLSITVRSVQLEEQKAENDSVIWQANTEAMQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG40191-PB | 396 | CG40191-PB | 1..396 | 1..396 | 2032 | 100 | Plus |
CG40191-PC | 378 | CG40191-PC | 1..378 | 1..396 | 1912 | 95.5 | Plus |
CG40191-PD | 378 | CG40191-PD | 1..378 | 1..396 | 1912 | 95.5 | Plus |
CG40191-PA | 378 | CG40191-PA | 1..378 | 1..396 | 1912 | 95.5 | Plus |
CG40191-PE | 268 | CG40191-PE | 1..268 | 129..396 | 1371 | 100 | Plus |