BDGP Sequence Production Resources |
Search the DGRC for RE22677
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 226 |
Well: | 77 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG9577-RA |
Protein status: | RE22677.pep: gold |
Preliminary Size: | 1012 |
Sequenced Size: | 1145 |
Gene | Date | Evidence |
---|---|---|
CG9577 | 2001-12-14 | Blastp of sequenced clone |
CG9577 | 2002-01-01 | Sim4 clustering to Release 2 |
CG9577 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9577 | 2008-04-29 | Release 5.5 accounting |
CG9577 | 2008-08-15 | Release 5.9 accounting |
CG9577 | 2008-12-18 | 5.12 accounting |
1145 bp (1145 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071173
> RE22677.complete AGCTCTGCTACGTATCGTTAAGCAAACAAAACAAATTTAGCTGCCGCAAC AAGTAGATTTGATTTGAAACCAGTGAAAAGAAGGTTTATTATGTCGCTCT CCCGCCTGAACACTCTGATGAAACTAACGCCCAAGCCCACGGCCATCGGA TCCCTTAAGATGCAGAGAAACCTTTCCGCCCTCCCGGAATCCGGACCCAC CGGCTCTTTCAAGACGCTGGCCGTCAGTTCGCCCAAGCCGTTCGTCTTTC ATGTGGAGCTCCATCGGCCCAGCAAGTTCAACGCCATAAGCAAGCAGATG TGGCTGGAGATCAAGGAGTGCTTCGACGGACTGGCCACTAATCCCGACTG CCGGGCTATCGTTTTGTCCGCCTCCGGAAAGCACTTCACCGCCGGCATCG ACCTCAACGACATGATAAACGTGGGCCAAACGCTGGCCGAGACCGATGAC TACGCCCGCAAGGGCGTCTCCATGGAGCGAATGATCAAGGTGTACCAGGA CTCAATCAGCAGCCTGGAGCACTGCCCCAAGCCGGTCATCACGGCGGTGC ACAAGGCGTGCATCGGCGCCGGCGTGGACCTGATTACCGCCGCCGACATT CGCTACTGCACCGAGGACGCCTTTTTCCAGGTCAAGGAGGTGGACATCGG CATGGCCGCCGACGTGGGCACCCTGCAGCGTCTGCCCAAGGCAGTGGGCA GTCAGTCCCTCGCCCGCGAGCTGTGCTTCACTGGGCGCAAATTCGAGGCC GCCGAGGCCCACTCCTCGGGCCTGGTGAGTCGCCTCTTCCCAGACAAGGA TTCCCTGCTGACCGGAGCCCTGGCCGTGGCCGAGCTCATCGCTAGCAAGA GTCCCGTCGCCGTAAAGACAACCAAGGAGAGCCTCGTGTACTCCCTGGAG CACACCAATCAAGAGGGCTTGGATCACATTCTCCTGCTGAACAAGCTCAA CCTGCTGTCGGAGGACTTCGCCCAGGCTGTGGCCGCCCAGTTGACGAAGG ACGATAAGCCAGTGTTCGCCAAGCTGTGATCGGTAACCTGTAATATGTAA TCTGCAATCTGACAGAATTTAAAATGTATTTGCCATGTGTGCATTTATAA ATACAGCATCTGCCTTTACTTTAGGACCCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9577-RA | 1357 | CG9577-RA | 182..1313 | 1..1132 | 5645 | 99.9 | Plus |
CG9581.a | 1848 | CG9581.a | 1807..1848 | 1132..1091 | 210 | 100 | Minus |
CG9581-RA | 1895 | CG9581-RA | 1854..1895 | 1132..1091 | 210 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 20055739..20056363 | 306..930 | 3125 | 100 | Plus |
chrX | 22417052 | chrX | 20056430..20056628 | 931..1129 | 995 | 100 | Plus |
chrX | 22417052 | chrX | 20055504..20055668 | 142..306 | 825 | 100 | Plus |
chrX | 22417052 | chrX | 20055223..20055364 | 1..142 | 695 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 20167191..20167815 | 306..930 | 3125 | 100 | Plus |
X | 23542271 | X | 20167882..20168083 | 931..1132 | 1010 | 100 | Plus |
X | 23542271 | X | 20166956..20167120 | 142..306 | 825 | 100 | Plus |
X | 23542271 | X | 20166675..20166816 | 1..142 | 695 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 20175289..20175913 | 306..930 | 3125 | 100 | Plus |
X | 23527363 | X | 20175980..20176181 | 931..1132 | 1010 | 100 | Plus |
X | 23527363 | X | 20175054..20175218 | 142..306 | 825 | 100 | Plus |
X | 23527363 | X | 20174773..20174914 | 1..142 | 695 | 99.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 20055223..20055364 | 1..142 | 99 | -> | Plus |
chrX | 20055505..20055667 | 143..305 | 100 | -> | Plus |
chrX | 20055739..20056363 | 306..930 | 100 | -> | Plus |
chrX | 20056430..20056628 | 931..1129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9577-RA | 1..939 | 91..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9577-RA | 1..939 | 91..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9577-RA | 1..939 | 91..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9577-RA | 1..939 | 91..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9577-RA | 1..939 | 91..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9577-RA | 1..1129 | 1..1129 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9577-RA | 1..1129 | 1..1129 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9577-RA | 3..1131 | 1..1129 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9577-RA | 1..1129 | 1..1129 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9577-RA | 3..1131 | 1..1129 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20166675..20166816 | 1..142 | 99 | -> | Plus |
X | 20166957..20167119 | 143..305 | 100 | -> | Plus |
X | 20167191..20167815 | 306..930 | 100 | -> | Plus |
X | 20167882..20168080 | 931..1129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20166675..20166816 | 1..142 | 99 | -> | Plus |
X | 20166957..20167119 | 143..305 | 100 | -> | Plus |
X | 20167191..20167815 | 306..930 | 100 | -> | Plus |
X | 20167882..20168080 | 931..1129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20166675..20166816 | 1..142 | 99 | -> | Plus |
X | 20166957..20167119 | 143..305 | 100 | -> | Plus |
X | 20167191..20167815 | 306..930 | 100 | -> | Plus |
X | 20167882..20168080 | 931..1129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 20060708..20060849 | 1..142 | 99 | -> | Plus |
arm_X | 20060990..20061152 | 143..305 | 100 | -> | Plus |
arm_X | 20061224..20061848 | 306..930 | 100 | -> | Plus |
arm_X | 20061915..20062113 | 931..1129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20175289..20175913 | 306..930 | 100 | -> | Plus |
X | 20175980..20176178 | 931..1129 | 100 | Plus | |
X | 20174773..20174914 | 1..142 | 99 | -> | Plus |
X | 20175055..20175217 | 143..305 | 100 | -> | Plus |
Translation from 90 to 1028
> RE22677.hyp MSLSRLNTLMKLTPKPTAIGSLKMQRNLSALPESGPTGSFKTLAVSSPKP FVFHVELHRPSKFNAISKQMWLEIKECFDGLATNPDCRAIVLSASGKHFT AGIDLNDMINVGQTLAETDDYARKGVSMERMIKVYQDSISSLEHCPKPVI TAVHKACIGAGVDLITAADIRYCTEDAFFQVKEVDIGMAADVGTLQRLPK AVGSQSLARELCFTGRKFEAAEAHSSGLVSRLFPDKDSLLTGALAVAELI ASKSPVAVKTTKESLVYSLEHTNQEGLDHILLLNKLNLLSEDFAQAVAAQ LTKDDKPVFAKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9577-PA | 312 | CG9577-PA | 1..312 | 1..312 | 1574 | 100 | Plus |
CG6543-PA | 295 | CG6543-PA | 55..261 | 55..277 | 240 | 31.4 | Plus |
CG6543-PB | 295 | CG6543-PB | 55..261 | 55..277 | 240 | 31.4 | Plus |
CG8778-PA | 299 | CG8778-PA | 3..250 | 1..262 | 222 | 28.3 | Plus |
CG13890-PA | 262 | CG13890-PA | 21..187 | 56..233 | 152 | 24.2 | Plus |
Translation from 90 to 1028
> RE22677.pep MSLSRLNTLMKLTPKPTAIGSLKMQRNLSALPESGPTGSFKTLAVSSPKP FVFHVELHRPSKFNAISKQMWLEIKECFDGLATNPDCRAIVLSASGKHFT AGIDLNDMINVGQTLAETDDYARKGVSMERMIKVYQDSISSLEHCPKPVI TAVHKACIGAGVDLITAADIRYCTEDAFFQVKEVDIGMAADVGTLQRLPK AVGSQSLARELCFTGRKFEAAEAHSSGLVSRLFPDKDSLLTGALAVAELI ASKSPVAVKTTKESLVYSLEHTNQEGLDHILLLNKLNLLSEDFAQAVAAQ LTKDDKPVFAKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20237-PA | 318 | GF20237-PA | 1..318 | 1..312 | 1334 | 79.9 | Plus |
Dana\GF11161-PA | 293 | GF11161-PA | 53..261 | 55..279 | 244 | 30.7 | Plus |
Dana\GF11465-PA | 299 | GF11465-PA | 42..250 | 45..262 | 227 | 29.8 | Plus |
Dana\GF24414-PA | 260 | GF24414-PA | 20..238 | 55..281 | 168 | 24.3 | Plus |
Dana\GF11437-PA | 280 | GF11437-PA | 6..232 | 21..263 | 158 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19273-PA | 314 | GG19273-PA | 1..314 | 1..312 | 1506 | 93.9 | Plus |
Dere\GG22466-PA | 294 | GG22466-PA | 44..260 | 45..277 | 245 | 30.5 | Plus |
Dere\GG22562-PA | 299 | GG22562-PA | 42..250 | 45..262 | 235 | 31.1 | Plus |
Dere\GG14742-PA | 262 | GG14742-PA | 21..238 | 56..281 | 149 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12615-PA | 294 | GH12615-PA | 14..294 | 32..312 | 1164 | 77.9 | Plus |
Dgri\GH20865-PA | 293 | GH20865-PA | 43..259 | 45..277 | 266 | 31.3 | Plus |
Dgri\GH22640-PA | 298 | GH22640-PA | 53..249 | 57..262 | 212 | 30 | Plus |
Dgri\GH11876-PA | 272 | GH11876-PA | 12..225 | 39..253 | 158 | 25.9 | Plus |
Dgri\GH16867-PA | 259 | GH16867-PA | 19..186 | 55..233 | 156 | 24.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9577-PA | 312 | CG9577-PA | 1..312 | 1..312 | 1574 | 100 | Plus |
Echs1-PA | 295 | CG6543-PA | 55..261 | 55..277 | 240 | 31.4 | Plus |
Echs1-PB | 295 | CG6543-PB | 55..261 | 55..277 | 240 | 31.4 | Plus |
CG8778-PA | 299 | CG8778-PA | 3..250 | 1..262 | 222 | 28.3 | Plus |
Dci-PA | 262 | CG13890-PA | 21..187 | 56..233 | 152 | 24.2 | Plus |
CG5844-PA | 378 | CG5844-PA | 60..260 | 55..268 | 152 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11030-PA | 310 | GI11030-PA | 1..310 | 1..312 | 1220 | 72.1 | Plus |
Dmoj\GI20973-PA | 293 | GI20973-PA | 43..259 | 45..277 | 264 | 31.3 | Plus |
Dmoj\GI21154-PA | 301 | GI21154-PA | 56..252 | 57..262 | 214 | 31.4 | Plus |
Dmoj\GI15664-PA | 275 | GI15664-PA | 12..210 | 36..237 | 168 | 25.4 | Plus |
Dmoj\GI11426-PA | 260 | GI11426-PA | 6..187 | 40..233 | 167 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13079-PA | 319 | GL13079-PA | 1..319 | 1..312 | 1296 | 76.2 | Plus |
Dper\GL16995-PA | 296 | GL16995-PA | 90..262 | 89..277 | 229 | 36 | Plus |
Dper\GL11030-PA | 191 | GL11030-PA | 19..142 | 141..262 | 169 | 35.2 | Plus |
Dper\GL16867-PA | 261 | GL16867-PA | 21..188 | 55..233 | 156 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21887-PA | 319 | GA21887-PA | 1..319 | 1..312 | 1296 | 76.2 | Plus |
Dpse\GA19673-PB | 296 | GA19673-PB | 35..262 | 34..277 | 271 | 33.2 | Plus |
Dpse\GA19673-PA | 296 | GA19673-PA | 35..262 | 34..277 | 271 | 33.2 | Plus |
Dpse\GA21314-PA | 298 | GA21314-PA | 53..249 | 57..262 | 205 | 30.5 | Plus |
Dpse\GA12604-PA | 260 | GA12604-PA | 20..191 | 55..237 | 189 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23012-PA | 312 | GM23012-PA | 1..312 | 1..312 | 1617 | 97.1 | Plus |
Dsec\GM20252-PA | 294 | GM20252-PA | 54..260 | 55..277 | 247 | 31.4 | Plus |
Dsec\GM20345-PA | 233 | GM20345-PA | 19..184 | 88..262 | 200 | 34.1 | Plus |
Dsec\GM14360-PA | 262 | GM14360-PA | 21..187 | 56..233 | 147 | 24.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25738-PA | 294 | GD25738-PA | 54..260 | 55..277 | 247 | 31.4 | Plus |
Dsim\GD25824-PA | 299 | GD25824-PA | 3..250 | 1..262 | 240 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15810-PA | 313 | GJ15810-PA | 1..313 | 1..312 | 1221 | 72.5 | Plus |
Dvir\GJ20693-PA | 293 | GJ20693-PA | 43..259 | 45..277 | 267 | 31.8 | Plus |
Dvir\GJ21004-PA | 281 | GJ21004-PA | 36..232 | 57..262 | 208 | 31.4 | Plus |
Dvir\GJ19197-PA | 274 | GJ19197-PA | 17..246 | 39..278 | 160 | 24.6 | Plus |
Dvir\GJ13621-PA | 260 | GJ13621-PA | 2..187 | 36..233 | 159 | 22.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25337-PA | 317 | GK25337-PA | 1..317 | 1..312 | 1206 | 69.4 | Plus |
Dwil\GK17937-PA | 295 | GK17937-PA | 45..261 | 45..277 | 246 | 30.5 | Plus |
Dwil\GK15915-PA | 302 | GK15915-PA | 57..253 | 57..262 | 221 | 31.9 | Plus |
Dwil\GK17361-PA | 262 | GK17361-PA | 17..189 | 52..233 | 211 | 26.9 | Plus |
Dwil\GK14405-PA | 390 | GK14405-PA | 49..262 | 41..268 | 163 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15891-PA | 314 | GE15891-PA | 1..314 | 1..312 | 1523 | 94.6 | Plus |
Dyak\GE13337-PA | 294 | GE13337-PA | 54..260 | 55..277 | 248 | 31.4 | Plus |
Dyak\GE13432-PA | 299 | GE13432-PA | 23..250 | 26..262 | 238 | 30.3 | Plus |
Dyak\GE21104-PA | 262 | GE21104-PA | 21..238 | 56..281 | 155 | 23.6 | Plus |