BDGP Sequence Production Resources |
Search the DGRC for RE22765
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 227 |
Well: | 65 |
Vector: | pFlc-1 |
Associated Gene/Transcript | dgrn-RB |
Protein status: | RE22765.pep: gold |
Preliminary Size: | 1642 |
Sequenced Size: | 1450 |
Gene | Date | Evidence |
---|---|---|
CG10981 | 2002-10-01 | Blastp of sequenced clone |
CG10981 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10981 | 2008-04-29 | Release 5.5 accounting |
CG10981 | 2008-08-15 | Release 5.9 accounting |
CG10981 | 2008-12-18 | 5.12 accounting |
1450 bp (1450 high quality bases) assembled on 2002-10-01
GenBank Submission: BT001574
> RE22765.complete ATCTTTAAAATAACCGAATGGTCGCGTGAAAGGAGGAAACTATTTTGCAC ATTTCAATCTGCACTAAAGCACATGTATATCTGGGTTCACCTGCTTTTGT CTTTACTACGAAATCATTTCACAAGTTTCCTGGTCATTTGTTGCTCGAAC AATGTCAGATTCGACTATTTTCCGTTTTTCAGCGGACAGCAACGTATCCA GTTCGAGCTCCAATTCCAGTGTATCCGACTCTTCTGTGGACTCCCATTCA TCCATAGAATCCAATTCGGGACACAATACATCCGTGGAATCTCAGTCATC CGCGGAATCTGATTCATCCGCTGATTCCCATTCGTCCTTGGAACGCCCAT CCCCAGTGGAGCGTGATTTATCTGTGGAATCAGACTCATCTTCAGCCACC AATACCAGCGAATCTTCAGTCGGAGAAGCTTCAAACCAACTGCAGTCACC GCAAAGCAATAACCCCTTAAATATGGCTAACTTGTCTGTCTCGACTGAAG ATGCTCATTCGCAGATCAGATCACTTACCCAGGATGTGATCCAGATGGAA GCAGAGTTGGATCGCATGAATCGCTACTGCGAGGAAGTTGTGGCACAGAT TGACACCTTCGCCACGAGAACCTCAACGCCAACAACTCGTAGAATTCGCC GCAGAACGAGTCCAGTAGAAGTGATAGATCTGTCCCATTTGGACCGTGCA CCACCTGTTCGATCCGCTCGGAATCGTGATCCCGATGCTTTCATCGATCT ATGCACCCCCGAAGGCCCAAGAAGTCGCACAGTGAATCTTCACTCCAACG ACTCCCTCACCATTCTGCCACGTCGGTCAGCCGAAAATGACCCGGTAGTG GATCTCGACGTTGCGTCGCCACCAAAACGCGTTAATCGCGACATTGATGA GTCCCAAAAAGAGGAGTTATACAAGTGCCCCATCTGCATGGACAGTGTAT CGAAGCGCGAGCCAGTGTCAACCAAATGTGGACACGTCTTCTGCCGCGAA TGCATCGAAACAGCCATCAGAGCTACGCACAAGTGCCCAATATGCAACAA GAAGCTGACCGCACGTCAATTCTTTCGCATTTACTTGTAAGTTGCTTATA CTATTTCACATTTTTTGCTCTGTGAGCCTTAATATAATATAGTTTAAAAA AAAACGCTTAACTATGTTAGAGACGGCAAATAATGTCTGTTCTTGTGATT CAGAAAAAATTAGTTATTTAAGTTGTCCTATGTAATCAGTGGCGCCCAAA AATATTTGAATACAACTATAAAAACTAAAGACTTCACTTTTGATGTATGA AACCATCTCAGGCTAGAATAATATAAGAACGACCGAAAGGAGTGTCAAAG TATTATGTAGGCATTTTTCCAAACGCAATTTAACAATGTAACATACATAT AATATAATAAATAAAATGGTCCCAACGCATATCGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1651451..1652227 | 657..1433 | 3885 | 100 | Plus |
chr3R | 27901430 | chr3R | 1650703..1651090 | 179..566 | 1940 | 100 | Plus |
chr3R | 27901430 | chr3R | 1650444..1650621 | 1..178 | 890 | 100 | Plus |
chr3R | 27901430 | chr3R | 1651145..1651234 | 567..656 | 450 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5825805..5826581 | 657..1433 | 3885 | 100 | Plus |
3R | 32079331 | 3R | 5825057..5825444 | 179..566 | 1940 | 100 | Plus |
3R | 32079331 | 3R | 5824798..5824975 | 1..178 | 890 | 100 | Plus |
3R | 32079331 | 3R | 5825499..5825588 | 567..656 | 450 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5566636..5567412 | 657..1433 | 3885 | 100 | Plus |
3R | 31820162 | 3R | 5565888..5566275 | 179..566 | 1940 | 100 | Plus |
3R | 31820162 | 3R | 5565629..5565806 | 1..178 | 890 | 100 | Plus |
3R | 31820162 | 3R | 5566330..5566419 | 567..656 | 450 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1650444..1650621 | 1..178 | 100 | -> | Plus |
chr3R | 1650703..1651090 | 179..566 | 100 | -> | Plus |
chr3R | 1651145..1651234 | 567..656 | 100 | -> | Plus |
chr3R | 1651451..1652227 | 657..1434 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10981-RB | 1..939 | 152..1090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10981-RB | 1..939 | 152..1090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgrn-RB | 1..939 | 152..1090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10981-RB | 1..939 | 152..1090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgrn-RB | 1..939 | 152..1090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10981-RB | 194..1621 | 1..1428 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10981-RB | 194..1621 | 1..1428 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgrn-RB | 194..1621 | 1..1428 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10981-RB | 194..1621 | 1..1428 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dgrn-RB | 184..1611 | 1..1428 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5824798..5824975 | 1..178 | 100 | -> | Plus |
3R | 5825057..5825444 | 179..566 | 100 | -> | Plus |
3R | 5825499..5825588 | 567..656 | 100 | -> | Plus |
3R | 5825805..5826581 | 657..1434 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5824798..5824975 | 1..178 | 100 | -> | Plus |
3R | 5825057..5825444 | 179..566 | 100 | -> | Plus |
3R | 5825499..5825588 | 567..656 | 100 | -> | Plus |
3R | 5825805..5826581 | 657..1434 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5824798..5824975 | 1..178 | 100 | -> | Plus |
3R | 5825057..5825444 | 179..566 | 100 | -> | Plus |
3R | 5825499..5825588 | 567..656 | 100 | -> | Plus |
3R | 5825805..5826581 | 657..1434 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1650520..1650697 | 1..178 | 100 | -> | Plus |
arm_3R | 1650779..1651166 | 179..566 | 100 | -> | Plus |
arm_3R | 1651221..1651310 | 567..656 | 100 | -> | Plus |
arm_3R | 1651527..1652303 | 657..1434 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5565888..5566275 | 179..566 | 100 | -> | Plus |
3R | 5566330..5566419 | 567..656 | 100 | -> | Plus |
3R | 5566636..5567412 | 657..1434 | 99 | Plus | |
3R | 5565629..5565806 | 1..178 | 100 | -> | Plus |
Translation from 151 to 1089
> RE22765.pep MSDSTIFRFSADSNVSSSSSNSSVSDSSVDSHSSIESNSGHNTSVESQSS AESDSSADSHSSLERPSPVERDLSVESDSSSATNTSESSVGEASNQLQSP QSNNPLNMANLSVSTEDAHSQIRSLTQDVIQMEAELDRMNRYCEEVVAQI DTFATRTSTPTTRRIRRRTSPVEVIDLSHLDRAPPVRSARNRDPDAFIDL CTPEGPRSRTVNLHSNDSLTILPRRSAENDPVVDLDVASPPKRVNRDIDE SQKEELYKCPICMDSVSKREPVSTKCGHVFCRECIETAIRATHKCPICNK KLTARQFFRIYL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16357-PA | 202 | GF16357-PA | 16..202 | 124..312 | 588 | 60.5 | Plus |
Dana\GF14677-PA | 326 | GF14677-PA | 157..326 | 136..312 | 357 | 45.1 | Plus |
Dana\GF15935-PA | 116 | GF15935-PA | 31..116 | 232..312 | 209 | 45.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13065-PA | 320 | GG13065-PA | 51..320 | 63..312 | 920 | 71.1 | Plus |
Dere\GG22477-PA | 94 | GG22477-PA | 22..94 | 238..312 | 198 | 50.7 | Plus |
Dere\GG21725-PA | 192 | GG21725-PA | 114..192 | 227..312 | 180 | 43 | Plus |
Dere\GG23586-PA | 106 | GG23586-PA | 54..105 | 256..311 | 163 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22295-PA | 202 | GH22295-PA | 84..202 | 159..312 | 270 | 37.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dgrn-PB | 312 | CG10981-PB | 1..312 | 1..312 | 1584 | 100 | Plus |
dgrn-PA | 319 | CG10981-PA | 1..319 | 1..312 | 1566 | 97.8 | Plus |
dgrn-PD | 205 | CG10981-PD | 1..205 | 108..312 | 1070 | 100 | Plus |
CG43058-PA | 100 | CG43058-PA | 10..100 | 187..312 | 214 | 35.7 | Plus |
elfless-PC | 229 | CG15150-PC | 42..229 | 149..312 | 183 | 30.7 | Plus |
elfless-PB | 229 | CG15150-PB | 42..229 | 149..312 | 183 | 30.7 | Plus |
CG44271-PA | 106 | CG44271-PA | 55..105 | 257..311 | 157 | 50.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21991-PA | 294 | GI21991-PA | 68..294 | 116..312 | 384 | 43.2 | Plus |
Dmoj\GI14783-PA | 374 | GI14783-PA | 319..374 | 257..312 | 222 | 62.5 | Plus |
Dmoj\GI13656-PA | 254 | GI13656-PA | 199..254 | 257..312 | 218 | 58.9 | Plus |
Dmoj\GI15418-PA | 707 | GI15418-PA | 651..707 | 257..312 | 182 | 50.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24328-PA | 317 | GL24328-PA | 102..317 | 112..312 | 428 | 48.2 | Plus |
Dper\GL24317-PA | 151 | GL24317-PA | 27..151 | 191..312 | 218 | 42.5 | Plus |
Dper\GL20345-PA | 117 | GL20345-PA | 43..117 | 236..312 | 216 | 53.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10686-PB | 326 | GA10686-PB | 111..326 | 112..312 | 437 | 49.1 | Plus |
Dpse\GA26569-PA | 209 | GA26569-PA | 85..209 | 191..312 | 251 | 43.6 | Plus |
Dpse\GA28705-PA | 209 | GA28705-PA | 85..209 | 191..312 | 241 | 44.8 | Plus |
Dpse\GA28704-PA | 209 | GA28704-PA | 85..209 | 191..312 | 241 | 44.8 | Plus |
Dpse\GA28682-PA | 138 | GA28682-PA | 14..138 | 191..312 | 237 | 44.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10845-PA | 329 | GM10845-PA | 1..329 | 1..312 | 1115 | 80.9 | Plus |
Dsec\GM20261-PA | 167 | GM20261-PA | 21..87 | 235..298 | 171 | 47.1 | Plus |
Dsec\GM13869-PA | 91 | GM13869-PA | 5..91 | 224..312 | 158 | 39.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19827-PA | 329 | GD19827-PA | 42..329 | 35..312 | 1117 | 83 | Plus |
Dsim\GD25747-PA | 101 | GD25747-PA | 15..101 | 229..312 | 207 | 45.5 | Plus |
Dsim\GD22545-PA | 91 | GD22545-PA | 17..91 | 233..312 | 154 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18825-PA | 288 | GJ18825-PA | 175..288 | 190..312 | 253 | 44.1 | Plus |
Dvir\GJ13990-PA | 303 | GJ13990-PA | 246..303 | 255..312 | 224 | 58.6 | Plus |
Dvir\GJ16377-PA | 273 | GJ16377-PA | 153..273 | 198..312 | 190 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14441-PA | 207 | GK14441-PA | 71..207 | 169..312 | 381 | 53.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10170-PA | 344 | GE10170-PA | 1..344 | 1..312 | 946 | 68.6 | Plus |
Dyak\GE13346-PA | 230 | GE13346-PA | 146..230 | 230..312 | 214 | 44.7 | Plus |
Dyak\GE13114-PA | 239 | GE13114-PA | 171..239 | 240..312 | 181 | 46.6 | Plus |
Dyak\GE18407-PA | 107 | GE18407-PA | 55..106 | 256..311 | 147 | 44.6 | Plus |
Translation from 151 to 1089
> RE22765.hyp MSDSTIFRFSADSNVSSSSSNSSVSDSSVDSHSSIESNSGHNTSVESQSS AESDSSADSHSSLERPSPVERDLSVESDSSSATNTSESSVGEASNQLQSP QSNNPLNMANLSVSTEDAHSQIRSLTQDVIQMEAELDRMNRYCEEVVAQI DTFATRTSTPTTRRIRRRTSPVEVIDLSHLDRAPPVRSARNRDPDAFIDL CTPEGPRSRTVNLHSNDSLTILPRRSAENDPVVDLDVASPPKRVNRDIDE SQKEELYKCPICMDSVSKREPVSTKCGHVFCRECIETAIRATHKCPICNK KLTARQFFRIYL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dgrn-PB | 312 | CG10981-PB | 1..312 | 1..312 | 1584 | 100 | Plus |
dgrn-PA | 319 | CG10981-PA | 1..319 | 1..312 | 1566 | 97.8 | Plus |
dgrn-PD | 205 | CG10981-PD | 1..205 | 108..312 | 1070 | 100 | Plus |
CG43058-PA | 100 | CG43058-PA | 10..100 | 187..312 | 214 | 35.7 | Plus |
elfless-PC | 229 | CG15150-PC | 42..229 | 149..312 | 183 | 30.7 | Plus |