Clone RE23320 Report

Search the DGRC for RE23320

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:233
Well:20
Vector:pFlc-1
Associated Gene/TranscriptCG1233-RB
Protein status:RE23320.pep: gold
Sequenced Size:4024

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1233 2004-07-13 Blastp of sequenced clone
CG1233 2008-04-29 Release 5.5 accounting
CG1233 2008-08-15 Release 5.9 accounting
CG1233 2008-12-18 5.12 accounting

Clone Sequence Records

RE23320.complete Sequence

4024 bp (4024 high quality bases) assembled on 2005-09-12

GenBank Submission: BT015225

> RE23320.complete
ACACTGTGTACAGCAACAGCTGTTCGCTATCAGTTATTTTGTGATGAAAA
GTTTTTTTTCTGCGTAATGCCAATTTTTGTGATGCGGAATTAAGAGGCGT
GTGCCCAGGAAGCGGAAAACCGGCAACCGGCAACCGGAATCCGGCACCGG
GAATCAACTGGACCAAGGAAGGCACCCACGATGAGCGATGCGACCTATCC
GGGATATTACGGCGGCAACCAGCTGCTCCCGTTGTCGCATCCGCATCCTA
CACATCCGCACCAAGACCTGTCGCTTTCCACGCCGGTTCACTCCTTGGAG
CAGGACTCCAACTTCGGGGGATTCTTTGACGAAGAGCTGGTCATCGGATC
GGGATCCGGATCTGCCTCCGCGTCTGCTGCAAACACCACCCCTTCTGGAA
CTACTTTGTGGCTGGCCGATGGCGGGAATCGATCACCTACTGAGGTGGCG
GTGGAGTCCCAGCCCAATCAGGGCATTCCCTTTGTCCAGATCCACACCAC
CGACTTGCAGCAACCAGAGAAAAGCTACCGCAATGCCTTCCGCAGGCGTA
CAGCGGAAATTAAGTCGGAGGAACTAATCAAGTCGGAACTTGCGGAAGCG
GCAGCCAAGGATCGCCTGAATGCCACGCCAACGCCACCAACTCGAAATTC
CAGCTGCGCCAGCGTGGAGGGCAAGGCAATCATTCAGGAGGGTCCGCCTC
TTATCCTGCGCTGTCCTAATTGTCCATTCTTAAGCCTCTGCCAGATGCGT
CTTCAGCAACACCTTAGTCAGGGCAACTGCTATATGGAGCAGCACAGGAA
ACAGTGTCCAGGCTGCTCAAACATTTTCTACACCAGCGATGCGCTCAGCT
TGCACCTCAGCTTGGACCATCAAATGGAGGACAGTGAGACACTTGCGCTT
ATGGGCAGAAAAGTCACTGAAGCACAAACTAAAAAGCAGACTCAGATGTC
GCAGAGCCAAAATCGACCCAAGAGCCGCATCTTTATAAAAAGCGTAGATT
GCCTAAGGGAGCCACTCCCGGATTTCCCGCCCTTAATGCCGGATAGCGGG
TCCGCCGCTAACATTCTTGATCTGCTGGAAGGTGTGGCTGTAGGTGCATC
GCCGACCGAACAGACAATGCCAACAGCACCTGCTGCGAATTTACCAGCTC
CGCCGCCAAAGCCCATCCAGAAGATCTCCATCAAGAGCGTGGACGTGCTC
AGGGAGACCGCTTTGCTGCCGTTCGACTTCCAGCTGCAGAACCATTCGGT
CAATACGGACAATAGTCTCCCTGAAGTTCCTGATGTTGTCGGGGAGCCGG
AGAAGCCGCGCCAGCCGAAGATTTATATCCGCAATGTAGACATCCTCAAG
GAACCGATGGTTTTGCCATCTGCTCTGCCCGGTCTGGGATTCAATAGCAC
CATGCCGTCGGCAGCAGAGCCAGGACAAAGTGGCCTGGTTGTAGGAGGAG
CAGATGGTGATGTCTTCCAGTCGGAGACACTACTAACGCCCACGTGTCAG
CTTCCAGGATTCGAGCCCAGCCTCGCCCCGCTCGCACAGATGTGTTCCGA
GGCATTTCCCTTTGATTCTGTGCTGAATGGCAATGGAGCACCTGCCGCCC
ATGTGGAAAACACACGTTTTAGTGCTTTGGACCTTGATTTTGGTGTGGAT
TTTGTTTCGGAAGAGGCAACTCCGCCACCTCCTCTGAATGATCCACTGAC
AATGATGGAACCACAACCTGTCCAGCTGGAGCACTACATGCCACCTACGG
CTCCCATTACGACCAAGCAAAAGATCTTCATCAAAAACGTGGACATTTTG
AAAGCACCGCAGAGGGGCACCTTGCACCTGCGCACTGTGGACGAACTAAA
CCTAATGAATCGCACCGAGGTGGAGCACTTAATCGTGCCCAATCTAGAAC
CGATGGCAATGACCATGATGGAGCTTCCGCCCGTGCAGCAGCAGCCAATG
GAAGTAACTTCACAGCTCAAGGGACCAACGGAAACGCTTGGCGAATTTCA
GCCGTCTATTAGTGAAAGTTGGCCTAGCGAGGATGGCTATGACCTACCTG
AGGATCTGGAGTGCTGGCCGTGGATGGAAGATGCTGTACCAGAAGCTGGA
CTCGTTCTGCCTACACCCAGTGAAGTGGCTAATGCTCCCCCACTCGATGG
TTTGTCTCACAATGCAGTGGATCTGCTAGTCAAGGATTTTTCGCATTTGT
ACGCCGCACCACCGGAGGACACACAAAACGCAGAAGAAGGAACTGCAGCG
GGAGGACGAGGGACAGTGCCACCTCTAGTACCGGTAACATCTTCGGAAGG
GACAGCCTCTGTTGCTCAAAGTGCAGCATTAGGTAGTTTGCCGGTTCCGC
CGCTGGTTCCCTTGGCAGCCGAGATGAATGCTGCTATCGAAAAGCCAGCC
CGCATCTATGTGGCCAATAATCTTCTTCCCGCCGCCGTGGACCCACCGCT
TCTTGGAGGCGGCACCTCGGTCAGGGGCCGTCCCTACGGAGCGAAGCACT
CTGGTGGAGCAGCTTCCAAAAGAAAACTCTCTCTGGGCCCAAATCAAGTG
CCAGAGGGAGGCAAGTGCCTTGTGGAGGGCTGTATGTTCCGTTTCAAATC
ACCCGTAACTTTGGAGTATCACGGCAGATGCCACAATGGATCCCTCAGCT
CAAACCAACCCGTTGTGTGCCCGGAATGCAAGTCCAGCAACTTTAGCAAT
TGGAACTGTCTGCATACGCATCTCTGGCGGACCCACCAAATCGACATGGA
GCTGTACTCCTGCCAGCTGTGCAGCTTTAAGACGCCCATCTATTCGCGTC
TCGTGAACACCCACGCTAAGATCCACTCGGAGGAGCGAAACTATAAGTGC
GAGCAGTGTGGCAAGGGATTTAAGAACACCAAGCAATTGAAGAATCACCG
TCGCTTGCATCGCACTCAAGGATTGGGCATGGGAAAGCAGTCGAACGAGC
AGATTTCCGTGGGACCAGAAGGTAATCCCGTTGTAATGCATCGCTGCGAA
GATTGCGGCGCCGCCTTCAAGCAGAAGAAAACCCTAAGGGAGCACCTATG
CAAAGAGCGAAACGAACAGCTGGAATGCCCCGAGTGCCAGCGCCGTTTTG
GTTCTAAGAGCAGCCTGAGACTTCATCTTCGGAGCCATCAGGAGCATAAA
CGTTTCCGCTGCGACACCTGTGATCATGAGACCAGCGATCACAATGCCTA
TCGCCGCCACCTAGCCACGCACAAGGAGAGTAAACGCTACTCCTGCCCGC
ACTGCGACTTCCGAGCCATCCAGAGCACCGCCTTTCGGATACACCTTCAG
ACCCGCCATCCTGAACAGGAGCTGTCCACAATCATTTACAAATGCAACCA
GTGCAACTTCACCAGCATCAATCAAGGTCTGTTGCAGGTTCACCAGGCCA
AGCATGACGCCGGAAATCACAATCAAACTTTAGCGTCATCCCAGGGTGAT
GTTCCGGTGGAGAAACAATCACAGATCAAGGTGGAGAGCAATTTGGTGCT
CGCTCATTCCAGTACAAAAGTGGCTACGGAGGTGATCAAGGCTCAAGAGA
ATATCCTGCAGGCTTCCTAGGGACGAGTTCCTCCCTTCTGTACATATTTT
AGAAGATAGATTGCGCGAGAACAAAGTGCCGCTTAGTTTTAATCGAGTTT
TATACCAAAACTGTACCAATGTTATTAGTGTTAAGTACGCAGGAAGTCAC
AGTAAGGGGGAAAACTCCAATTCAGATGCTTGATTCCTTTGGAAGGATGA
TAATGTTGATGGATTGGATCTTTTCAACTGAAGACTGTGCAATCCAAGAC
TTCGGAATTCTCCGAAGATAATTCTTTTGACTTTTACGTTTTTCTTTTTC
TGTATATGTTTGCCCTACAATTTTAAGGACCTGTTGCTTTACATAAGTAT
GTATATAAAGGTTAATTGGGGAAGGCTTTATTAATTGAACTCCAGTTTCA
TTCCTTTCTATATACACAGCATGCTCAGAACAGAAATACATTTACACATA
CATTTAAAAAAAAAAAAAAAAAAA

RE23320.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:28:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG1233-RB 4078 CG1233-RB 54..4060 1..4007 20020 99.9 Plus
CG1233-RA 4131 CG1233-RA 325..4113 219..4007 18930 99.9 Plus
CG1233.a 4099 CG1233.a 232..3301 219..3288 15335 99.9 Plus
CG1233.a 4099 CG1233.a 3362..4081 3288..4007 3600 100 Plus
CG1233-RA 4131 CG1233-RA 54..275 1..222 1110 100 Plus
CG1233.a 4099 CG1233.a 1..182 41..222 910 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:57:48
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 362377..364856 809..3288 12370 99.9 Plus
chr3L 24539361 chr3L 364917..365648 3288..4005 3415 98.1 Plus
chr3L 24539361 chr3L 361702..362295 219..812 2970 100 Plus
chr3L 24539361 chr3L 361431..361652 1..222 1110 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:43:02 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:57:46
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 362424..364903 809..3288 12385 100 Plus
3L 28110227 3L 364964..365683 3288..4007 3600 100 Plus
3L 28110227 3L 361749..362342 219..812 2970 100 Plus
3L 28110227 3L 361478..361699 1..222 1110 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:19:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 362424..364903 809..3288 12385 99.9 Plus
3L 28103327 3L 364964..365683 3288..4007 3600 100 Plus
3L 28103327 3L 361749..362342 219..812 2970 100 Plus
3L 28103327 3L 361478..361699 1..222 1110 100 Plus
Blast to na_te.dros performed on 2019-03-16 18:57:47 has no hits.

RE23320.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:58:39 Download gff for RE23320.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 361431..361652 1..222 100 -> Plus
chr3L 361706..362294 223..811 100 -> Plus
chr3L 362380..364856 812..3288 99 -> Plus
chr3L 364918..365415 3289..3786 100 -> Plus
chr3L 365430..365648 3787..4005 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:03:09 Download gff for RE23320.complete
Subject Subject Range Query Range Percent Splice Strand
CG1233-RB 1..3390 181..3570 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:50:01 Download gff for RE23320.complete
Subject Subject Range Query Range Percent Splice Strand
CG1233-RB 1..3390 181..3570 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:20:33 Download gff for RE23320.complete
Subject Subject Range Query Range Percent Splice Strand
CG1233-RB 1..3390 181..3570 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:30:48 Download gff for RE23320.complete
Subject Subject Range Query Range Percent Splice Strand
CG1233-RB 1..3390 181..3570 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:56:35 Download gff for RE23320.complete
Subject Subject Range Query Range Percent Splice Strand
CG1233-RB 1..3390 181..3570 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:23:19 Download gff for RE23320.complete
Subject Subject Range Query Range Percent Splice Strand
CG1233-RB 1..4005 1..4005 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:50:01 Download gff for RE23320.complete
Subject Subject Range Query Range Percent Splice Strand
CG1233-RB 1..4005 1..4005 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:20:33 Download gff for RE23320.complete
Subject Subject Range Query Range Percent Splice Strand
CG1233-RB 7..4011 1..4005 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:30:49 Download gff for RE23320.complete
Subject Subject Range Query Range Percent Splice Strand
CG1233-RB 1..4005 1..4005 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:56:35 Download gff for RE23320.complete
Subject Subject Range Query Range Percent Splice Strand
CG1233-RB 7..4011 1..4005 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:58:39 Download gff for RE23320.complete
Subject Subject Range Query Range Percent Splice Strand
3L 361478..361699 1..222 100 -> Plus
3L 361753..362341 223..811 100 -> Plus
3L 362427..364903 812..3288 99 -> Plus
3L 364965..365681 3289..4005 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:58:39 Download gff for RE23320.complete
Subject Subject Range Query Range Percent Splice Strand
3L 361478..361699 1..222 100 -> Plus
3L 361753..362341 223..811 100 -> Plus
3L 362427..364903 812..3288 99 -> Plus
3L 364965..365681 3289..4005 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:58:39 Download gff for RE23320.complete
Subject Subject Range Query Range Percent Splice Strand
3L 361478..361699 1..222 100 -> Plus
3L 361753..362341 223..811 100 -> Plus
3L 362427..364903 812..3288 99 -> Plus
3L 364965..365681 3289..4005 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:20:33 Download gff for RE23320.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 361478..361699 1..222 100 -> Plus
arm_3L 361753..362341 223..811 100 -> Plus
arm_3L 362427..364903 812..3288 99 -> Plus
arm_3L 364965..365681 3289..4005 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:09:12 Download gff for RE23320.complete
Subject Subject Range Query Range Percent Splice Strand
3L 361478..361699 1..222 100 -> Plus
3L 361753..362341 223..811 100 -> Plus
3L 362427..364903 812..3288 99 -> Plus
3L 364965..365681 3289..4005 100   Plus

RE23320.pep Sequence

Translation from 180 to 3569

> RE23320.pep
MSDATYPGYYGGNQLLPLSHPHPTHPHQDLSLSTPVHSLEQDSNFGGFFD
EELVIGSGSGSASASAANTTPSGTTLWLADGGNRSPTEVAVESQPNQGIP
FVQIHTTDLQQPEKSYRNAFRRRTAEIKSEELIKSELAEAAAKDRLNATP
TPPTRNSSCASVEGKAIIQEGPPLILRCPNCPFLSLCQMRLQQHLSQGNC
YMEQHRKQCPGCSNIFYTSDALSLHLSLDHQMEDSETLALMGRKVTEAQT
KKQTQMSQSQNRPKSRIFIKSVDCLREPLPDFPPLMPDSGSAANILDLLE
GVAVGASPTEQTMPTAPAANLPAPPPKPIQKISIKSVDVLRETALLPFDF
QLQNHSVNTDNSLPEVPDVVGEPEKPRQPKIYIRNVDILKEPMVLPSALP
GLGFNSTMPSAAEPGQSGLVVGGADGDVFQSETLLTPTCQLPGFEPSLAP
LAQMCSEAFPFDSVLNGNGAPAAHVENTRFSALDLDFGVDFVSEEATPPP
PLNDPLTMMEPQPVQLEHYMPPTAPITTKQKIFIKNVDILKAPQRGTLHL
RTVDELNLMNRTEVEHLIVPNLEPMAMTMMELPPVQQQPMEVTSQLKGPT
ETLGEFQPSISESWPSEDGYDLPEDLECWPWMEDAVPEAGLVLPTPSEVA
NAPPLDGLSHNAVDLLVKDFSHLYAAPPEDTQNAEEGTAAGGRGTVPPLV
PVTSSEGTASVAQSAALGSLPVPPLVPLAAEMNAAIEKPARIYVANNLLP
AAVDPPLLGGGTSVRGRPYGAKHSGGAASKRKLSLGPNQVPEGGKCLVEG
CMFRFKSPVTLEYHGRCHNGSLSSNQPVVCPECKSSNFSNWNCLHTHLWR
THQIDMELYSCQLCSFKTPIYSRLVNTHAKIHSEERNYKCEQCGKGFKNT
KQLKNHRRLHRTQGLGMGKQSNEQISVGPEGNPVVMHRCEDCGAAFKQKK
TLREHLCKERNEQLECPECQRRFGSKSSLRLHLRSHQEHKRFRCDTCDHE
TSDHNAYRRHLATHKESKRYSCPHCDFRAIQSTAFRIHLQTRHPEQELST
IIYKCNQCNFTSINQGLLQVHQAKHDAGNHNQTLASSQGDVPVEKQSQIK
VESNLVLAHSSTKVATEVIKAQENILQAS*

RE23320.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:51:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24895-PA 1098 GF24895-PA 1..1079 1..1111 3399 61.1 Plus
Dana\GF24289-PA 442 GF24289-PA 101..369 799..1078 287 27.5 Plus
Dana\GF18102-PA 1798 GF18102-PA 1505..1760 824..1075 223 24.9 Plus
Dana\GF15824-PA 738 GF15824-PA 296..513 830..1075 221 28.2 Plus
Dana\GF22998-PA 577 GF22998-PA 86..259 850..1044 217 27.8 Plus
Dana\GF15824-PA 738 GF15824-PA 247..539 749..1040 209 27.4 Plus
Dana\GF18102-PA 1798 GF18102-PA 1566..1789 795..1043 167 23.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:51:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14722-PA 1131 GG14722-PA 1..1131 1..1129 5404 91.2 Plus
Dere\GG16146-PA 445 GG16146-PA 107..373 801..1078 290 28.8 Plus
Dere\GG21197-PA 1281 GG21197-PA 500..732 827..1079 219 26.5 Plus
Dere\GG23673-PA 712 GG23673-PA 241..496 821..1075 214 27.5 Plus
Dere\GG20118-PA 556 GG20118-PA 327..548 795..1039 207 29.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:51:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15459-PA 1113 GH15459-PA 4..1090 1..1108 2792 55 Plus
Dgri\GH10428-PA 799 GH10428-PA 299..544 830..1075 230 27.8 Plus
Dgri\GH19280-PA 715 GH19280-PA 213..412 827..1046 205 28.2 Plus
Dgri\GH13710-PA 763 GH13710-PA 233..367 859..1014 204 30.4 Plus
Dgri\GH19229-PA 597 GH19229-PA 431..561 890..1040 203 30.3 Plus
Dgri\GH19229-PA 597 GH19229-PA 431..563 939..1075 180 29 Plus
Dgri\GH19229-PA 597 GH19229-PA 431..563 861..1014 172 29 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:05:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG1233-PB 1129 CG1233-PB 1..1129 1..1129 5995 100 Plus
CG1233-PA 941 CG1233-PA 1..941 189..1129 5003 100 Plus
CG11456-PC 445 CG11456-PC 107..373 801..1078 314 28.8 Plus
CG11456-PA 445 CG11456-PA 107..373 801..1078 314 28.8 Plus
CG5245-PA 501 CG5245-PA 80..270 857..1075 283 28.6 Plus
CG5245-PA 501 CG5245-PA 135..354 826..1075 269 27.1 Plus
Meics-PB 571 CG8474-PB 223..517 759..1084 265 27.1 Plus
Meics-PA 583 CG8474-PA 235..529 759..1084 265 27.1 Plus
CG42726-PA 441 CG42726-PA 70..294 792..1044 263 29.6 Plus
CG5245-PA 501 CG5245-PA 253..492 801..1040 262 27.8 Plus
CG12299-PA 736 CG12299-PA 246..520 821..1096 262 27.6 Plus
CG7987-PB 1283 CG7987-PB 479..733 801..1079 254 25.8 Plus
CG7987-PA 1283 CG7987-PA 479..733 801..1079 254 25.8 Plus
Meics-PB 571 CG8474-PB 302..568 810..1076 242 26.4 Plus
Meics-PA 583 CG8474-PA 314..580 810..1076 242 26.4 Plus
Plzf-PB 469 CG6792-PB 189..411 800..1046 240 27.7 Plus
Plzf-PA 469 CG6792-PA 189..411 800..1046 240 27.7 Plus
CG32772-PE 520 CG32772-PE 132..325 860..1076 238 28.1 Plus
CG32772-PC 520 CG32772-PC 132..325 860..1076 238 28.1 Plus
CG11247-PC 522 CG11247-PC 98..343 801..1075 235 25.4 Plus
CG11247-PA 522 CG11247-PA 98..343 801..1075 235 25.4 Plus
CG11247-PB 522 CG11247-PB 98..343 801..1075 235 25.4 Plus
crol-PF 907 CG14938-PF 33..468 643..1075 234 23.4 Plus
su(Hw)-PC 941 CG8573-PC 292..549 830..1113 234 25.5 Plus
su(Hw)-PB 941 CG8573-PB 292..549 830..1113 234 25.5 Plus
su(Hw)-PA 941 CG8573-PA 292..549 830..1113 234 25.5 Plus
CG10147-PB 448 CG10147-PB 169..437 859..1083 231 24.8 Plus
CG10147-PA 448 CG10147-PA 169..437 859..1083 231 24.8 Plus
crol-PG 878 CG14938-PG 33..495 643..1075 231 23.1 Plus
crol-PC 756 CG14938-PC 33..448 643..1094 229 23.5 Plus
crol-PB 891 CG14938-PB 33..495 643..1075 229 22.9 Plus
crol-PI 962 CG14938-PI 33..495 643..1075 229 22.9 Plus
crol-PE 962 CG14938-PE 33..495 643..1075 229 22.9 Plus
crol-PA 962 CG14938-PA 33..495 643..1075 229 22.9 Plus
CG5245-PA 501 CG5245-PA 170..466 801..1075 228 25.2 Plus
Meics-PB 571 CG8474-PB 390..571 814..990 228 29.3 Plus
Meics-PA 583 CG8474-PA 402..583 814..990 228 29.3 Plus
CG10366-PA 578 CG10366-PA 245..472 801..1046 228 24.5 Plus
CG6654-PA 639 CG6654-PA 363..639 801..1107 227 24.8 Plus
CG11696-PA 664 CG11696-PA 329..587 798..1044 227 27.4 Plus
CG32772-PF 374 CG32772-PF 2..179 877..1076 226 27.5 Plus
CG32772-PD 374 CG32772-PD 2..179 877..1076 226 27.5 Plus
crol-PH 686 CG14938-PH 33..449 643..1094 226 23.5 Plus
rn-PF 927 CG42277-PF 469..640 859..1046 225 31 Plus
rn-PE 946 CG42277-PE 488..659 859..1046 225 31 Plus
rn-PG 952 CG42277-PG 488..659 859..1046 225 31 Plus
CG10959-PB 441 CG10959-PB 226..416 826..1040 224 30.9 Plus
CG10959-PA 443 CG10959-PA 228..418 826..1040 224 30.9 Plus
Cf2-PA 510 CG11924-PA 366..509 888..1044 224 31.6 Plus
crol-PD 878 CG14938-PD 33..527 643..1079 224 21.9 Plus
CG32772-PE 520 CG32772-PE 128..382 825..1080 222 26.9 Plus
CG32772-PC 520 CG32772-PC 128..382 825..1080 222 26.9 Plus
CTCF-PA 818 CG8591-PA 287..637 762..1114 221 22.4 Plus
CG5245-PA 501 CG5245-PA 75..243 881..1075 219 25.1 Plus
crol-PF 907 CG14938-PF 279..556 796..1079 219 23.5 Plus
CG15436-PA 346 CG15436-PA 131..327 801..1025 219 26.5 Plus
rn-PC 692 CG42277-PC 231..405 852..1046 219 29.2 Plus
CG11247-PC 522 CG11247-PC 89..254 884..1071 218 24.5 Plus
CG11247-PA 522 CG11247-PA 89..254 884..1071 218 24.5 Plus
CG11247-PB 522 CG11247-PB 89..254 884..1071 218 24.5 Plus
CG31612-PB 987 CG31612-PB 700..987 801..1078 218 27.2 Plus
CG32772-PF 374 CG32772-PF 2..210 846..1080 217 27.4 Plus
CG32772-PD 374 CG32772-PD 2..210 846..1080 217 27.4 Plus
CG17612-PA 618 CG17612-PA 293..570 801..1080 217 23.5 Plus
CG17612-PB 618 CG17612-PB 293..570 801..1080 217 23.5 Plus
wek-PB 470 CG4148-PB 271..436 859..1045 215 26.2 Plus
wek-PA 470 CG4148-PA 271..436 859..1045 215 26.2 Plus
crol-PB 891 CG14938-PB 338..579 801..1075 214 23.9 Plus
crol-PI 962 CG14938-PI 338..579 801..1075 214 23.9 Plus
crol-PE 962 CG14938-PE 338..579 801..1075 214 23.9 Plus
crol-PA 962 CG14938-PA 338..579 801..1075 214 23.9 Plus
crol-PF 907 CG14938-PF 451..672 801..1045 206 26.7 Plus
crol-PD 878 CG14938-PD 422..643 801..1045 206 26.7 Plus
su(Hw)-PC 941 CG8573-PC 358..586 810..1051 204 27.1 Plus
su(Hw)-PB 941 CG8573-PB 358..586 810..1051 204 27.1 Plus
su(Hw)-PA 941 CG8573-PA 358..586 810..1051 204 27.1 Plus
CG6654-PA 639 CG6654-PA 329..518 859..1075 201 24.2 Plus
crol-PG 878 CG14938-PG 435..643 814..1045 198 26.5 Plus
crol-PC 756 CG14938-PC 313..521 814..1045 198 26.5 Plus
crol-PI 962 CG14938-PI 519..727 814..1045 198 26.5 Plus
crol-PE 962 CG14938-PE 519..727 814..1045 198 26.5 Plus
crol-PA 962 CG14938-PA 519..727 814..1045 198 26.5 Plus
su(Hw)-PC 941 CG8573-PC 397..620 779..1016 195 26.2 Plus
su(Hw)-PB 941 CG8573-PB 397..620 779..1016 195 26.2 Plus
su(Hw)-PA 941 CG8573-PA 397..620 779..1016 195 26.2 Plus
CG15436-PA 346 CG15436-PA 144..318 878..1077 195 23.4 Plus
CG5245-PA 501 CG5245-PA 47..187 926..1075 193 29.6 Plus
CG15436-PA 346 CG15436-PA 159..346 801..1015 191 27.6 Plus
CG42726-PA 441 CG42726-PA 6..285 816..1099 185 22.9 Plus
CG15436-PA 346 CG15436-PA 128..327 830..1058 185 23 Plus
crol-PB 891 CG14938-PB 399..654 810..1094 179 23.7 Plus
CG10959-PA 443 CG10959-PA 193..364 880..1075 179 24.2 Plus
CG32772-PE 520 CG32772-PE 192..377 801..1014 178 27.2 Plus
CG32772-PC 520 CG32772-PC 192..377 801..1014 178 27.2 Plus
CG32772-PF 374 CG32772-PF 46..231 801..1014 178 27.2 Plus
CG32772-PD 374 CG32772-PD 46..231 801..1014 178 27.2 Plus
CG10959-PB 441 CG10959-PB 199..418 859..1075 175 25.9 Plus
CG10959-PA 443 CG10959-PA 201..420 859..1075 175 25.9 Plus
CG15436-PA 346 CG15436-PA 117..260 928..1075 174 24.8 Plus
Cf2-PA 510 CG11924-PA 366..503 859..1010 173 29.6 Plus
CG31612-PB 987 CG31612-PB 638..894 873..1117 166 23.3 Plus
CG11247-PC 522 CG11247-PC 84..280 930..1125 165 22.9 Plus
CG11247-PA 522 CG11247-PA 84..280 930..1125 165 22.9 Plus
CG11247-PB 522 CG11247-PB 84..280 930..1125 165 22.9 Plus
CG31612-PB 987 CG31612-PB 694..925 858..1082 162 21.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:51:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16739-PA 1075 GI16739-PA 5..1075 2..1105 2590 52.4 Plus
Dmoj\GI23506-PA 777 GI23506-PA 303..548 830..1075 225 27.8 Plus
Dmoj\GI10527-PA 897 GI10527-PA 271..511 858..1086 210 25.1 Plus
Dmoj\GI24263-PA 604 GI24263-PA 446..576 890..1040 206 30.3 Plus
Dmoj\GI10657-PA 1303 GI10657-PA 500..754 801..1079 203 26.1 Plus
Dmoj\GI24263-PA 604 GI24263-PA 414..578 915..1075 187 27.1 Plus
Dmoj\GI24263-PA 604 GI24263-PA 440..578 855..1014 180 29.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:51:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22491-PA 1135 GL22491-PA 1..1135 1..1129 3289 61 Plus
Dper\GL24407-PA 442 GL24407-PA 103..369 801..1078 300 28.4 Plus
Dper\GL20486-PA 339 GL20486-PA 129..316 830..1041 244 28.2 Plus
Dper\GL20488-PA 270 GL20488-PA 24..265 801..1075 223 25.4 Plus
Dper\GL26275-PA 880 GL26275-PA 625..857 811..1048 214 29.9 Plus
Dper\GL26275-PA 880 GL26275-PA 402..632 818..1075 210 28.6 Plus
Dper\GL20488-PA 270 GL20488-PA 11..216 850..1082 202 25.2 Plus
Dper\GL20486-PA 339 GL20486-PA 145..317 878..1075 189 25.6 Plus
Dper\GL26275-PA 880 GL26275-PA 120..265 859..1025 168 28.6 Plus
Dper\GL26275-PA 880 GL26275-PA 410..751 767..1111 168 27.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:51:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11559-PA 1135 GA11559-PA 1..1135 1..1129 3276 61.4 Plus
Dpse\GA11015-PA 442 GA11015-PA 103..369 801..1078 308 29 Plus
Dpse\GA30120-PA 442 GA30120-PA 68..292 792..1044 226 29.2 Plus
Dpse\GA28997-PA 704 GA28997-PA 283..532 830..1079 214 26.3 Plus
Dpse\GA28104-PA 368 GA28104-PA 103..340 801..1043 213 30.9 Plus
Dpse\GA28997-PA 704 GA28997-PA 340..531 799..1017 158 25.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:51:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14340-PA 1126 GM14340-PA 1..1126 1..1129 5507 94.7 Plus
Dsec\GM15472-PA 196 GM15472-PA 1..194 15..211 893 93.9 Plus
Dsec\GM19619-PA 161 GM19619-PA 6..161 748..903 843 97.4 Plus
Dsec\GM22329-PA 447 GM22329-PA 109..375 801..1078 278 28.4 Plus
Dsec\GM18478-PA 345 GM18478-PA 130..344 801..1043 222 26.6 Plus
Dsec\GM18478-PA 345 GM18478-PA 125..315 859..1075 177 22 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:51:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11015-PA 1128 GD11015-PA 1..1128 1..1129 5576 95.3 Plus
Dsim\GD14917-PA 426 GD14917-PA 88..354 801..1078 273 28.1 Plus
Dsim\GD23730-PA 750 GD23730-PA 242..497 821..1075 221 27.9 Plus
Dsim\GD20411-PA 1282 GD20411-PA 501..733 827..1079 217 26.8 Plus
Dsim\GD19016-PA 365 GD19016-PA 59..296 775..1044 204 28.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:51:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12486-PA 1102 GJ12486-PA 4..1086 2..1111 2685 53.9 Plus
Dvir\GJ20712-PA 735 GJ20712-PA 283..528 830..1075 225 27.8 Plus
Dvir\GJ17144-PA 321 GJ17144-PA 130..281 859..1025 206 26.4 Plus
Dvir\gl-PA 598 GJ10836-PA 429..559 890..1040 203 30.3 Plus
Dvir\GJ15680-PA 297 GJ15680-PA 84..293 823..1049 198 28.5 Plus
Dvir\gl-PA 598 GJ10836-PA 418..561 928..1075 183 28.2 Plus
Dvir\gl-PA 598 GJ10836-PA 423..561 855..1014 177 29.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:51:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19731-PA 1167 GK19731-PA 1..1158 1..1125 3004 56.1 Plus
Dwil\GK25365-PA 452 GK25365-PA 103..377 799..1078 284 28.1 Plus
Dwil\GK14669-PA 673 GK14669-PA 272..527 795..1048 211 27.7 Plus
Dwil\GK11348-PA 1328 GK11348-PA 518..750 827..1079 211 26.5 Plus
Dwil\GK14807-PA 1050 GK14807-PA 675..874 786..1010 209 27.9 Plus
Dwil\GK14807-PA 1050 GK14807-PA 687..878 858..1047 170 26.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:51:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21085-PA 1131 GE21085-PA 1..1131 1..1129 5467 91.3 Plus
Dyak\GE19716-PA 445 GE19716-PA 107..373 801..1078 279 28.4 Plus
Dyak\GE26438-PA 1282 GE26438-PA 501..733 827..1079 218 27.1 Plus
Dyak\GE18486-PA 717 GE18486-PA 149..498 700..1075 208 25.6 Plus
Dyak\GE25797-PA 943 GE25797-PA 494..665 859..1046 208 31 Plus

RE23320.hyp Sequence

Translation from 180 to 3569

> RE23320.hyp
MSDATYPGYYGGNQLLPLSHPHPTHPHQDLSLSTPVHSLEQDSNFGGFFD
EELVIGSGSGSASASAANTTPSGTTLWLADGGNRSPTEVAVESQPNQGIP
FVQIHTTDLQQPEKSYRNAFRRRTAEIKSEELIKSELAEAAAKDRLNATP
TPPTRNSSCASVEGKAIIQEGPPLILRCPNCPFLSLCQMRLQQHLSQGNC
YMEQHRKQCPGCSNIFYTSDALSLHLSLDHQMEDSETLALMGRKVTEAQT
KKQTQMSQSQNRPKSRIFIKSVDCLREPLPDFPPLMPDSGSAANILDLLE
GVAVGASPTEQTMPTAPAANLPAPPPKPIQKISIKSVDVLRETALLPFDF
QLQNHSVNTDNSLPEVPDVVGEPEKPRQPKIYIRNVDILKEPMVLPSALP
GLGFNSTMPSAAEPGQSGLVVGGADGDVFQSETLLTPTCQLPGFEPSLAP
LAQMCSEAFPFDSVLNGNGAPAAHVENTRFSALDLDFGVDFVSEEATPPP
PLNDPLTMMEPQPVQLEHYMPPTAPITTKQKIFIKNVDILKAPQRGTLHL
RTVDELNLMNRTEVEHLIVPNLEPMAMTMMELPPVQQQPMEVTSQLKGPT
ETLGEFQPSISESWPSEDGYDLPEDLECWPWMEDAVPEAGLVLPTPSEVA
NAPPLDGLSHNAVDLLVKDFSHLYAAPPEDTQNAEEGTAAGGRGTVPPLV
PVTSSEGTASVAQSAALGSLPVPPLVPLAAEMNAAIEKPARIYVANNLLP
AAVDPPLLGGGTSVRGRPYGAKHSGGAASKRKLSLGPNQVPEGGKCLVEG
CMFRFKSPVTLEYHGRCHNGSLSSNQPVVCPECKSSNFSNWNCLHTHLWR
THQIDMELYSCQLCSFKTPIYSRLVNTHAKIHSEERNYKCEQCGKGFKNT
KQLKNHRRLHRTQGLGMGKQSNEQISVGPEGNPVVMHRCEDCGAAFKQKK
TLREHLCKERNEQLECPECQRRFGSKSSLRLHLRSHQEHKRFRCDTCDHE
TSDHNAYRRHLATHKESKRYSCPHCDFRAIQSTAFRIHLQTRHPEQELST
IIYKCNQCNFTSINQGLLQVHQAKHDAGNHNQTLASSQGDVPVEKQSQIK
VESNLVLAHSSTKVATEVIKAQENILQAS*

RE23320.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:52:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG1233-PB 1129 CG1233-PB 1..1129 1..1129 5995 100 Plus
CG1233-PA 941 CG1233-PA 1..941 189..1129 5003 100 Plus
CG11456-PC 445 CG11456-PC 107..373 801..1078 314 28.8 Plus
CG11456-PA 445 CG11456-PA 107..373 801..1078 314 28.8 Plus
CG5245-PA 501 CG5245-PA 80..270 857..1075 283 28.6 Plus