![]() | BDGP Sequence Production Resources |
Search the DGRC for RE23450
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 234 |
Well: | 50 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG14210-RA |
Protein status: | RE23450.pep: gold |
Preliminary Size: | 423 |
Sequenced Size: | 564 |
Gene | Date | Evidence |
---|---|---|
CG14210 | 2001-12-14 | Blastp of sequenced clone |
CG14210 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14210 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14210 | 2008-04-29 | Release 5.5 accounting |
CG14210 | 2008-08-15 | Release 5.9 accounting |
CG14210 | 2008-12-18 | 5.12 accounting |
564 bp (564 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071184
> RE23450.complete GACGTGCACTCGTGTTTTGTATTTGTGTTGTTTGCATTTGATTTCATATT AGACTAAACCGAACGCAAAATGAGTGAATCCGCACCGGAAACTGTGCCAG CCAAGAAGCCGGCAAAGGCCAAGAAGGCGGCAAAGCCGGAGAACAGCATA CCACGCGGCCAGCCCAAGTCGAACCGGCCGTGGAAGACGCCCAAGCAGAA ATTTAGCAAGATTAAGAAGACCGTTAACCGACTGTCCTTCGAAAAGAAGA CGGCCCTGCGCGACGAGCTGCGCTACATCAAGGAGCGCTCCAAGGAGATC AAGGACAAGCGCAAGGAGGATGCCGTCCAAAAGCACCAGCGCCGCGTGGA GAATGCCGAGCGCCGGCTGGCGAACGAGCGCCGCTCGGAGGTCGTCCAGG TCATCAAGAATCCCGCCAAGCTGAAGCGCATGAAGAAGAAACAGATGCGC ATGATCGAGAAGCGGGACGTCAGCCAGGTGAAGGTGGTCTGAGGTGGCTC CATTAGATTAACTTGTATTTTTTGATAAATAAATCTAGTTTTAATGCCAA AAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 19505262..19505609 | 201..548 | 100 | Plus | |
chrX | 19504999..19505198 | 1..200 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14210-RA | 1..423 | 70..492 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14210-RA | 1..423 | 70..492 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14210-RA | 1..423 | 70..492 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14210-RA | 1..423 | 70..492 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14210-RA | 1..423 | 70..492 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14210-RA | 2..548 | 2..548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14210-RA | 2..548 | 2..548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14210-RA | 12..559 | 1..548 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14210-RA | 2..548 | 2..548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14210-RA | 12..559 | 1..548 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19616207..19616406 | 1..200 | 99 | -> | Plus |
X | 19616470..19616817 | 201..548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19616207..19616406 | 1..200 | 99 | -> | Plus |
X | 19616470..19616817 | 201..548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19616207..19616406 | 1..200 | 99 | -> | Plus |
X | 19616470..19616817 | 201..548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 19510240..19510439 | 1..200 | 99 | -> | Plus |
arm_X | 19510503..19510850 | 201..548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19624568..19624915 | 201..548 | 100 | Plus | |
X | 19624305..19624504 | 1..200 | 99 | -> | Plus |
Translation from 69 to 491
> RE23450.pep MSESAPETVPAKKPAKAKKAAKPENSIPRGQPKSNRPWKTPKQKFSKIKK TVNRLSFEKKTALRDELRYIKERSKEIKDKRKEDAVQKHQRRVENAERRL ANERRSEVVQVIKNPAKLKRMKKKQMRMIEKRDVSQVKVV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20411-PA | 148 | GF20411-PA | 32..148 | 24..140 | 540 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19238-PA | 140 | GG19238-PA | 1..140 | 1..140 | 675 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24941-PA | 179 | GH24941-PA | 54..179 | 15..140 | 555 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14210-PB | 140 | CG14210-PB | 1..140 | 1..140 | 700 | 100 | Plus |
CG14210-PA | 140 | CG14210-PA | 1..140 | 1..140 | 700 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11118-PA | 199 | GI11118-PA | 83..199 | 24..140 | 535 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27058-PA | 146 | GL27058-PA | 32..146 | 26..140 | 523 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12825-PA | 146 | GA12825-PA | 32..146 | 26..140 | 517 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22973-PA | 140 | GM22973-PA | 1..140 | 1..140 | 684 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15973-PA | 181 | GJ15973-PA | 56..181 | 15..140 | 557 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10060-PA | 140 | GK10060-PA | 24..140 | 24..140 | 533 | 89.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15857-PA | 140 | GE15857-PA | 1..140 | 1..140 | 677 | 97.9 | Plus |
Translation from 69 to 491
> RE23450.hyp MSESAPETVPAKKPAKAKKAAKPENSIPRGQPKSNRPWKTPKQKFSKIKK TVNRLSFEKKTALRDELRYIKERSKEIKDKRKEDAVQKHQRRVENAERRL ANERRSEVVQVIKNPAKLKRMKKKQMRMIEKRDVSQVKVV*