Clone RE23490 Report

Search the DGRC for RE23490

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:234
Well:90
Vector:pFlc-1
Associated Gene/Transcriptdsx-c73A-RB
Protein status:RE23490.pep: gold
Preliminary Size:1551
Sequenced Size:3508

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32159 2001-12-14 Blastp of sequenced clone
CG13034 2002-01-01 Sim4 clustering to Release 2
CG32159 2003-01-01 Sim4 clustering to Release 3
CG32159 2008-04-29 Release 5.5 accounting
CG32159 2008-08-15 Release 5.9 accounting
CG32159 2008-12-18 5.12 accounting

Clone Sequence Records

RE23490.complete Sequence

3508 bp (3508 high quality bases) assembled on 2001-12-14

GenBank Submission: AY071185

> RE23490.complete
AACATTTGTAATCCGACGTTAGAAGTCTGCGGATCGTGGCCAAAAATCGG
AGTGTCCCAGCCAGCTGTCATTCTGACTCCTCCTGACTCTGCTCTGAACT
TCGCGTGTGTGTCTGTCTGAGTGTCCGAAGATTTGGAGTTACTGTTAGTT
GACACTAATACGAGAGCGAGTGAAATACGAGAAATACAAGAAAAAACCGA
ACGTGAATCGCGCGAGTGCAAAAAGTAAAGAAAATAGAAAGAAGAAGAAA
ACCCCAAACAAACAAACAAACAAAAAAAAATAGTGCGAAAAATCGATATA
AGAAAACCTGAAGAAAACGAAACTCGGCAATCGTGGTCAAAATGGTGCGG
TTAAGTGCAGCCTGGAGCTGCTGTTTTTTGGCCCTGATTGCGTTGGTATC
CACTGTCGCCTCCTCCGCTGCGGATTATCCGGGTGTCATCGAACTGGTGG
GTTATAGCAATCGCCGCGCACGGACTTACTTCCAAGAGCAACCCCGCTCC
AATCCCAATCCCAAGCCGGGTTTGACTTCGGCCAAAACCCGGGCGGATAT
TGAGACCGTGAAGCGGAATATCCGTAAATACGATCGTTTGCTAGAGTTGG
ATACGAAAAATCTGCCAGAGCAGCAAAAGGATATGCTCGCCAGGATTGTG
GAGCGAGTGGCCAGGCTCAAGGAATCCCTGGACATTGAGGAGCAGCAATT
TAACCAGCAGGAAGCTACCTCCTCCAGGAGCAGTAGTAGTACCACCACTA
GTGCATCCAGTACTCAAGAATCGCAAACAGAAGCGGAAACGGAGCTGGAT
CAGGAGCCGATCGAGCAGAGCACACAGCTGCCCACTGGAGCCACCGAAGC
TGAAACGGATCCCACCCTAATCCTAGACGAAACTACGCTGCTGGAGCTGC
AGAACACGATGAACGAGCAGGCTGCCATGAGCACCATAATGAAGGAAATG
CCCACGACCACGGATATGAGTCAGCAGGAAGCGGAATCGGAGGTCCCCGA
CGAGGAGGGAGAGACCACCTCACCAAATCTGACCACCCAATCGGAGGCAG
CGACGACCAGTGATGAATCCCTCACCGATTCCACTGATCCCGATGATCAA
TTCGTAGCTGCCAGATCGAATAACAATATAGCGGCCATAACGGCAGCGGA
TGATGCCGATGGCACCACCACAACCACCGCCAATACGGGCAGTCAGCAGC
GCACGTTGACCACCATGGGAAAACTTAAGAATCGGGCCACCAAGCGACCC
TTCGCCCACAAGGTCACCGCCGCCCTGAAACGAGGAGGTCAGCGTCCGAG
TAGCGTGAGTGCGGCAGCTGCGAGTGCGGCAGCGGCCTCAAAACCCAGTA
GCAGCACCACCACCGCCGCCGCCGCCAGCAGCACCACCCAGAAACAGAAA
TTGGCCACCAACAGTTTCCAGCAGAAGCAGCAGCAAGCGAAGCCCCTGCA
AAAGGTCACACCTTCGATTGGCGGTGGTGGATCATCCAACCCGTCCTCGG
CATCCATTCCCTCGGCTACCACGAATTCCGCAGCTCCCTCCTTGCCTATC
GAGCAATTGTATACCCGTACTCCCCAGGCCAATATCCCATTGGCAGCAGC
AGCAGCAGCAGCAACCTCATCCGCCTCAGCAGCGGCAGCAGCAGGATCAG
CAGGATCGGGAGCCACACCAGCCACCTACAGCAGCCAGCATGACAGCATG
GTATACGATGGACATGTCAATGCGTCGGCCTTGATCGACAGCCTGAACAC
AAACGCTCGGGAGGAATACTACCAGCAGAAACTAGGAGCAGGCAACAAGG
ATAACAAGAAAACGGCGACAGCGAAACCGACGAAATATCATTATTATCCG
CACAATCAGCACATCTATCTGCTGCCAGAGTGTGCCATTCAGCAAGTTTG
TAACGCCGTCTACGTGAGATTGAACTACACCCAACCACTGTGCGCCTGTC
CATCCAGATATCGTGATCCCTGCTCGGCCAGTCTGAATGAAGATGATCAG
CATACCACAAAATTGGTTGGCGATACCAAGAAGAAGGCCATCACATTGGC
CAAGACCTGCGAGGCCACCACCGAGATGCGCGAGTGCCGCTCGCCCAAGG
ATTGGTCCCTTCTGGCGCTCCAAAACACACGAACCGGCAAGTCGCACTAC
TTGGTCATCTGCCGCTGTCCCGATCACTTCAAGATGGAGGGACCCATGGC
CCATGACCAGCCCACCTATGCCAGCGTGCCCGGAATCCGAGTATTTGGCA
TGATGTGCGTTAAGCCGGGATATTCGGTGCGCAAGCCAAGCAACCAGCCA
CCCAAGAGGTATCAACTCCAGAAGCCATTCTATCGCCCCTCGGTGGGAAC
CACGGTGGGTGGCCAAAAGGATAGCTACGGCAGACCCATCTACGGTGGCT
CCAGCTCCTCGGGCAGCTCGGCCATCAGCTCCAACTACCAGCCGCAGGAC
TCGAGCTTCCAGAGCGGAGGCAGTAGTTCGTATCAGTATCTCAACCGACC
GGAGAGCGGTGTTAGCCACAGCTCCGCCAACTTCCGTCCGGATCAGTTCT
CGATCAACAATTTCCCGAGCAGCAACTACGGACGCAACAACGAGCGGCGC
GGCGATCTGCCGCCCATCGAAGCTATATCGAGTGGATCGGGAACCGGAGC
CGAGGAGCAGCCGAGCAGCAGTACACCAGCGGCTGAGGAGGAGGAGGCCA
GGACCACTGTGCAGGCAGAACAGGAGACGGAACCGGCGGAGGAAGCAGTT
CCAGCCGCGACAGCGGAACTGACCACCACAGCGGAGGAGGCTGCACTCGG
AAGCCGGACCAGGCGATCCCTACCCGATACGGACGACTATGAGCCGGAGT
TCCCGTGGGATCGCGTGCTCGAATTCCAGCAGAGCATCATTTGGGACTAA
GTTCCGGAAATACCAAGCAACCAATCCTAGTAGATACAATTTCAATAGCA
CACAAGGCGACATTTCCGGCGACTATAAAAACTGTGCAAAAAATCAACTG
TGACTGAAGAATGAGATGAGAAAAACGGAAGTAAAGTTCACGTCACGTAA
CGTCTAGCGTAACGTAACGTAATTAGCTAAGCTTTTCATAATTTAAAAAC
ATGTTTTTAGGCATTTCACTTGGCATTTCTTCCCAGCGTACCACCATCCC
TCTTAATTTATATATTTATACATGTATTTATTTACAAAACAATTTACGAA
TTAATTAAACAATTACACGGGCCCGGGCACGATCGCACTAATTGTTTAAT
TAATTTGTTTTGCATTTAAGCGTAAACAAGGCCTCAACTTTTTAAACTAA
TATTTAACGATTTAAACGAATAGTTTAGGTGCAAAACTGGAAACTATTTA
AAAAAAAACGAAACATATGAAAAAAATGATAATTAAATACATAAACCAAC
ACCGAAATTATTTAATCTAAATTTAGTTGCTTATTTATGTTTAGACCTAA
GCTGCATTTACTAGTAGTTAAATAAAATACTATTTAAAAAACAAAAAAAA
AAAAAAAA

RE23490.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:42:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG32159-RB 3556 CG32159-RB 65..3556 1..3492 17445 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:58:08
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 16439928..16441726 1808..1 8675 98.8 Minus
chr3L 24539361 chr3L 16412583..16413888 3491..2187 6420 99.6 Minus
chr3L 24539361 chr3L 16413956..16414108 2187..2035 765 100 Minus
chr3L 24539361 chr3L 16416560..16416710 1957..1807 755 100 Minus
chr3L 24539361 chr3L 16416369..16416453 2037..1953 425 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:43:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:58:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16450147..16451954 1808..1 9040 100 Minus
3L 28110227 3L 16422794..16424100 3493..2187 6520 99.9 Minus
3L 28110227 3L 16424168..16424320 2187..2035 765 100 Minus
3L 28110227 3L 16426767..16426917 1957..1807 755 100 Minus
3L 28110227 3L 16426576..16426660 2037..1953 425 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:09:24
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 16443247..16445054 1808..1 9040 100 Minus
3L 28103327 3L 16415894..16417200 3493..2187 6520 99.9 Minus
3L 28103327 3L 16417268..16417420 2187..2035 765 100 Minus
3L 28103327 3L 16419867..16420017 1957..1807 755 100 Minus
3L 28103327 3L 16419676..16419760 2037..1953 425 100 Minus
Blast to na_te.dros performed 2019-03-16 18:58:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2384 1376..1454 142 70 Plus
roo 9092 roo DM_ROO 9092bp 1049..1119 1377..1450 119 66.2 Plus

RE23490.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:58:51 Download gff for RE23490.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 16412582..16413887 2188..3492 99 <- Minus
chr3L 16413956..16414106 2037..2187 100 <- Minus
chr3L 16416370..16416448 1958..2036 100 <- Minus
chr3L 16416560..16416708 1809..1957 100 <- Minus
chr3L 16439928..16440078 1658..1808 100 == Minus
chr3L 16440135..16441726 1..1592 97   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:44:20 Download gff for RE23490.complete
Subject Subject Range Query Range Percent Splice Strand
CG32159-RB 1..2559 342..2900 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:08:09 Download gff for RE23490.complete
Subject Subject Range Query Range Percent Splice Strand
dsx-c73A-RB 1..2559 342..2900 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:20:47 Download gff for RE23490.complete
Subject Subject Range Query Range Percent Splice Strand
dsx-c73A-RB 1..2559 342..2900 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:32:26 Download gff for RE23490.complete
Subject Subject Range Query Range Percent Splice Strand
CG32159-RB 1..2559 342..2900 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:56:58 Download gff for RE23490.complete
Subject Subject Range Query Range Percent Splice Strand
dsx-c73A-RB 1..2559 342..2900 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:44:20 Download gff for RE23490.complete
Subject Subject Range Query Range Percent Splice Strand
CG32159-RB 1..3492 1..3492 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:08:09 Download gff for RE23490.complete
Subject Subject Range Query Range Percent Splice Strand
dsx-c73A-RB 1..3492 1..3492 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:20:47 Download gff for RE23490.complete
Subject Subject Range Query Range Percent Splice Strand
dsx-c73A-RB 5..3496 1..3492 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:32:26 Download gff for RE23490.complete
Subject Subject Range Query Range Percent Splice Strand
CG32159-RB 1..3492 1..3492 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:56:58 Download gff for RE23490.complete
Subject Subject Range Query Range Percent Splice Strand
dsx-c73A-RB 5..3496 1..3492 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:58:51 Download gff for RE23490.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16422795..16424099 2188..3492 99 <- Minus
3L 16424168..16424318 2037..2187 100 <- Minus
3L 16426577..16426655 1958..2036 100 <- Minus
3L 16426767..16426915 1809..1957 100 <- Minus
3L 16450147..16451954 1..1808 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:58:51 Download gff for RE23490.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16422795..16424099 2188..3492 99 <- Minus
3L 16424168..16424318 2037..2187 100 <- Minus
3L 16426577..16426655 1958..2036 100 <- Minus
3L 16426767..16426915 1809..1957 100 <- Minus
3L 16450147..16451954 1..1808 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:58:51 Download gff for RE23490.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16422795..16424099 2188..3492 99 <- Minus
3L 16424168..16424318 2037..2187 100 <- Minus
3L 16426577..16426655 1958..2036 100 <- Minus
3L 16426767..16426915 1809..1957 100 <- Minus
3L 16450147..16451954 1..1808 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:20:47 Download gff for RE23490.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16415895..16417199 2188..3492 99 <- Minus
arm_3L 16417268..16417418 2037..2187 100 <- Minus
arm_3L 16419677..16419755 1958..2036 100 <- Minus
arm_3L 16419867..16420015 1809..1957 100 <- Minus
arm_3L 16443247..16445054 1..1808 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:09:19 Download gff for RE23490.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16415895..16417199 2188..3492 99 <- Minus
3L 16417268..16417418 2037..2187 100 <- Minus
3L 16419677..16419755 1958..2036 100 <- Minus
3L 16419867..16420015 1809..1957 100 <- Minus
3L 16443247..16445054 1..1808 100   Minus

RE23490.pep Sequence

Translation from 341 to 2899

> RE23490.pep
MVRLSAAWSCCFLALIALVSTVASSAADYPGVIELVGYSNRRARTYFQEQ
PRSNPNPKPGLTSAKTRADIETVKRNIRKYDRLLELDTKNLPEQQKDMLA
RIVERVARLKESLDIEEQQFNQQEATSSRSSSSTTTSASSTQESQTEAET
ELDQEPIEQSTQLPTGATEAETDPTLILDETTLLELQNTMNEQAAMSTIM
KEMPTTTDMSQQEAESEVPDEEGETTSPNLTTQSEAATTSDESLTDSTDP
DDQFVAARSNNNIAAITAADDADGTTTTTANTGSQQRTLTTMGKLKNRAT
KRPFAHKVTAALKRGGQRPSSVSAAAASAAAASKPSSSTTTAAAASSTTQ
KQKLATNSFQQKQQQAKPLQKVTPSIGGGGSSNPSSASIPSATTNSAAPS
LPIEQLYTRTPQANIPLAAAAAAATSSASAAAAAGSAGSGATPATYSSQH
DSMVYDGHVNASALIDSLNTNAREEYYQQKLGAGNKDNKKTATAKPTKYH
YYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNE
DDQHTTKLVGDTKKKAITLAKTCEATTEMRECRSPKDWSLLALQNTRTGK
SHYLVICRCPDHFKMEGPMAHDQPTYASVPGIRVFGMMCVKPGYSVRKPS
NQPPKRYQLQKPFYRPSVGTTVGGQKDSYGRPIYGGSSSSGSSAISSNYQ
PQDSSFQSGGSSSYQYLNRPESGVSHSSANFRPDQFSINNFPSSNYGRNN
ERRGDLPPIEAISSGSGTGAEEQPSSSTPAAEEEEARTTVQAEQETEPAE
EAVPAATAELTTTAEEAALGSRTRRSLPDTDDYEPEFPWDRVLEFQQSII
WD*

RE23490.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:00:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10528-PA 931 GF10528-PA 1..573 1..565 2060 82.6 Plus
Dana\GF10528-PA 931 GF10528-PA 643..931 566..852 1276 86.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:00:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15880-PA 849 GG15880-PA 1..849 1..852 3671 93.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:00:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15588-PA 834 GH15588-PA 3..834 4..852 2530 66 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
dsx-c73A-PB 852 CG32159-PB 1..852 1..852 4355 100 Plus
Muc68D-PB 1514 CG6004-PB 602..1279 121..817 204 20.8 Plus
CG46026-PA 666 CG46026-PA 320..651 131..447 198 23.2 Plus
Sgs1-PA 1286 CG3047-PA 597..921 126..452 196 23.4 Plus
Muc68Ca-PA 3135 CG18331-PA 127..887 113..828 196 19.2 Plus
Sgs1-PA 1286 CG3047-PA 501..825 126..452 194 22.8 Plus
Muc68D-PB 1514 CG6004-PB 270..929 109..834 191 18.9 Plus
Sgs1-PA 1286 CG3047-PA 657..976 123..443 185 23.1 Plus
Muc4B-PC 496 CG32774-PC 56..394 109..447 185 21.2 Plus
Muc4B-PB 496 CG32774-PB 56..394 109..447 185 21.2 Plus
Sgs1-PA 1286 CG3047-PA 389..729 126..452 184 21.6 Plus
Muc68Ca-PA 3135 CG18331-PA 1184..1533 127..449 184 23.3 Plus
Mur11Da-PD 626 CG32644-PD 278..517 116..349 181 26.6 Plus
Sgs1-PA 1286 CG3047-PA 211..544 124..443 180 22 Plus
Sgs1-PA 1286 CG3047-PA 741..1065 126..452 180 22.5 Plus
Sgs1-PA 1286 CG3047-PA 709..1024 126..443 179 23.1 Plus
Cht6-PG 1580 CG43374-PG 999..1307 130..445 179 23.4 Plus
Sgs1-PA 1286 CG3047-PA 465..809 123..452 176 22 Plus
Muc68Ca-PA 3135 CG18331-PA 569..893 115..449 176 23.2 Plus
Sgs1-PA 1286 CG3047-PA 805..1104 126..443 175 23.6 Plus
Muc68D-PB 1514 CG6004-PB 742..1107 110..505 172 20.7 Plus
CG46026-PA 666 CG46026-PA 269..569 131..445 172 23.7 Plus
CG46026-PA 666 CG46026-PA 206..516 130..448 171 24.3 Plus
Muc68Ca-PA 3135 CG18331-PA 847..1213 115..449 171 21 Plus
Muc68Ca-PA 3135 CG18331-PA 1887..2253 113..449 171 22.3 Plus
tn-PC 1517 CG15105-PC 557..938 56..442 171 21.9 Plus
Sgs1-PA 1286 CG3047-PA 277..617 126..452 170 21.4 Plus
Sgs1-PA 1286 CG3047-PA 837..1158 126..443 168 21.7 Plus
Muc68Ca-PA 3135 CG18331-PA 1344..1693 127..449 168 21.9 Plus
Muc68Ca-PA 3135 CG18331-PA 1609..1933 115..449 168 22.8 Plus
Mur29B-PA 555 CG31901-PA 40..477 70..499 167 19.2 Plus
CG46026-PA 666 CG46026-PA 146..467 126..445 166 22.9 Plus
CG46026-PA 666 CG46026-PA 422..660 131..400 166 26.3 Plus
Muc68Ca-PA 3135 CG18331-PA 1129..1436 115..430 166 23.5 Plus
Mur11Da-PD 626 CG32644-PD 232..522 126..398 165 22.7 Plus
CG46026-PA 666 CG46026-PA 235..538 131..431 164 21 Plus
Muc68Ca-PA 3135 CG18331-PA 1449..1837 115..475 164 21.1 Plus
Muc68Ca-PA 3135 CG18331-PA 1807..2173 113..449 164 21.1 Plus
Muc4B-PC 496 CG32774-PC 24..366 94..448 163 22.5 Plus
Muc4B-PB 496 CG32774-PB 24..366 94..448 163 22.5 Plus
CG42525-PA 419 CG42525-PA 118..363 103..362 163 23.1 Plus
CG46026-PA 666 CG46026-PA 121..399 160..445 162 24.4 Plus
Muc68Ca-PA 3135 CG18331-PA 1529..1917 115..475 162 19.9 Plus
CG46026-PA 666 CG46026-PA 388..662 131..427 161 24.4 Plus
Muc68Ca-PA 3135 CG18331-PA 781..1133 130..449 161 21.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:00:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16865-PA 831 GI16865-PA 3..831 4..852 2589 67.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:00:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17992-PA 848 GL17992-PA 317..848 343..852 1851 77.3 Plus
Dper\GL17992-PA 848 GL17992-PA 8..124 7..125 456 77.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:00:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16723-PA 884 GA16723-PA 8..884 7..852 2631 72.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:00:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24399-PA 850 GM24399-PA 1..850 1..852 4385 97 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:00:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12468-PA 851 GD12468-PA 1..851 1..852 4390 97.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:00:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12615-PA 842 GJ12615-PA 3..842 4..852 2573 67 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:00:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17486-PA 881 GK17486-PA 28..881 25..852 2345 64.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:00:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22223-PA 849 GE22223-PA 1..849 1..852 3696 94.1 Plus

RE23490.hyp Sequence

Translation from 341 to 2899

> RE23490.hyp
MVRLSAAWSCCFLALIALVSTVASSAADYPGVIELVGYSNRRARTYFQEQ
PRSNPNPKPGLTSAKTRADIETVKRNIRKYDRLLELDTKNLPEQQKDMLA
RIVERVARLKESLDIEEQQFNQQEATSSRSSSSTTTSASSTQESQTEAET
ELDQEPIEQSTQLPTGATEAETDPTLILDETTLLELQNTMNEQAAMSTIM
KEMPTTTDMSQQEAESEVPDEEGETTSPNLTTQSEAATTSDESLTDSTDP
DDQFVAARSNNNIAAITAADDADGTTTTTANTGSQQRTLTTMGKLKNRAT
KRPFAHKVTAALKRGGQRPSSVSAAAASAAAASKPSSSTTTAAAASSTTQ
KQKLATNSFQQKQQQAKPLQKVTPSIGGGGSSNPSSASIPSATTNSAAPS
LPIEQLYTRTPQANIPLAAAAAAATSSASAAAAAGSAGSGATPATYSSQH
DSMVYDGHVNASALIDSLNTNAREEYYQQKLGAGNKDNKKTATAKPTKYH
YYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNE
DDQHTTKLVGDTKKKAITLAKTCEATTEMRECRSPKDWSLLALQNTRTGK
SHYLVICRCPDHFKMEGPMAHDQPTYASVPGIRVFGMMCVKPGYSVRKPS
NQPPKRYQLQKPFYRPSVGTTVGGQKDSYGRPIYGGSSSSGSSAISSNYQ
PQDSSFQSGGSSSYQYLNRPESGVSHSSANFRPDQFSINNFPSSNYGRNN
ERRGDLPPIEAISSGSGTGAEEQPSSSTPAAEEEEARTTVQAEQETEPAE
EAVPAATAELTTTAEEAALGSRTRRSLPDTDDYEPEFPWDRVLEFQQSII
WD*

RE23490.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:07:07
Subject Length Description Subject Range Query Range Score Percent Strand
dsx-c73A-PB 852 CG32159-PB 1..852 1..852 4355 100 Plus
Muc68D-PB 1514 CG6004-PB 602..1279 121..817 204 20.8 Plus
CG46026-PA 666 CG46026-PA 320..651 131..447 198 23.2 Plus
Sgs1-PA 1286 CG3047-PA 597..921 126..452 196 23.4 Plus
Muc68Ca-PA 3135 CG18331-PA 127..887 113..828 196 19.2 Plus
Sgs1-PA 1286 CG3047-PA 501..825 126..452 194 22.8 Plus
Muc68D-PB 1514 CG6004-PB 270..929 109..834 191 18.9 Plus
Sgs1-PA 1286 CG3047-PA 657..976 123..443 185 23.1 Plus
Sgs1-PA 1286 CG3047-PA 389..729 126..452 184 21.6 Plus
Sgs1-PA 1286 CG3047-PA 211..544 124..443 180 22 Plus
Sgs1-PA 1286 CG3047-PA 741..1065 126..452 180 22.5 Plus
Sgs1-PA 1286 CG3047-PA 709..1024 126..443 179 23.1 Plus
Sgs1-PA 1286 CG3047-PA 465..809 123..452 176 22 Plus
Sgs1-PA 1286 CG3047-PA 805..1104 126..443 175 23.6 Plus
Muc68D-PB 1514 CG6004-PB 742..1107 110..505 172 20.7 Plus
CG46026-PA 666 CG46026-PA 269..569 131..445 172 23.7 Plus
CG46026-PA 666 CG46026-PA 206..516 130..448 171 24.3 Plus
Sgs1-PA 1286 CG3047-PA 277..617 126..452 170 21.4 Plus
Sgs1-PA 1286 CG3047-PA 837..1158 126..443 168 21.7 Plus
CG46026-PA 666 CG46026-PA 146..467 126..445 166 22.9 Plus
CG46026-PA 666 CG46026-PA 422..660 131..400 166 26.3 Plus
CG46026-PA 666 CG46026-PA 235..538 131..431 164 21 Plus
CG46026-PA 666 CG46026-PA 121..399 160..445 162 24.4 Plus
CG46026-PA 666 CG46026-PA 388..662 131..427 161 24.4 Plus