BDGP Sequence Production Resources |
Search the DGRC for RE23632
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 236 |
Well: | 32 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG12746-RB |
Protein status: | RE23632.pep: gold |
Preliminary Size: | 1228 |
Sequenced Size: | 1353 |
Gene | Date | Evidence |
---|---|---|
CG12746 | 2002-10-01 | Blastp of sequenced clone |
CG12746 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12746 | 2008-04-29 | Release 5.5 accounting |
CG12746 | 2008-08-15 | Release 5.9 accounting |
CG12746 | 2008-12-18 | 5.12 accounting |
1353 bp (1353 high quality bases) assembled on 2002-10-01
GenBank Submission: BT001579
> RE23632.complete AGCCCTATTCTGATTTGCAAACTAACAACCGACTGATTTGAATCAAAACG AAAAGAAACGGCTGAAAAAAGTTTGGTTTTGTCGCGTGCATACGAGTTTT ACGCAATGAATTGCGACAAGCACCAGGCCTAAGCTGACAACCGAATATAC CCAACGGACTAACGAAATGACTGCGAGCAAGGAAGGTCAAGAATCCAGGC GAACCCTCAGCGACAGTTCCGCAGAGGACGTCAGGAATACAGGATCGAGG ACCAGGACCAACGACGACGAAATGTGGCGCAATGAACTTGCTATGAACAC GGACAGCAGCTCCGTTCAGCCAGAAAAGCGAGAGGAACGAAGCCACAGAA CAGGAAACTCTAATGCGAAGCTCAGCGATGCCGTAGATGTTGTTCTTCGC GTTCTCCTCGTCATTACCTTCTTCAAGTTGGAGACGATGACAGCATTCAA ACGGGAAATCCACGAGGAAGAGCTGTGGCTATACAAGAACCCAAGGCGAC CGGACATTGTCAGGGGCGGGGAGCTGCTCTTCTGGGTGATAGTGGCTCCC TTTCTGGTCACTATCGCCTTCTACTGGTACACAAGAGACAGGCGGGACTT TAGAGCCGCCAGCTGGGCCTGGACACTGGCCCTGTGCATGAACGGCATCC CAACGAGCGTACTAAAGATAACAGTGGGGCGGCCCAGGCCCGACTATTTT TACCGCTGCTTTCCCGATGGCGTGATGGTGCTTAACACAACGTCAAATGG CGTGGACACCTCCATCCTGGATTTCAATTGCACAGGGCTTCCGGGCGACA TAAACGAAGGCCGCAAGAGCTTCCCCAGCGGACACTCGTCGTTCGCCTTT GCGAGTTTCGGTTTCATTGCCTATTACATTGGCGCCAAGCTGCACGCCTT TGATAGCCGGGGACGCGGCCACACCTGGCGGCTCTGCATCGCTGTGATAC CTCTGTTTATCGCACTGCTGGTTGCAGTTAGTCGCACCTGCGACTACCAC CACCACTGGCAGGATGTGACCATCGGCGGGCTGATTGGCCTGTTTGCAGG CTATATAAGCTACACACAATACTATCCCTCCATCTTCTGCCCTGATGCCG GCATACCACTGGTCAGGTGGCCCAGCAGAGAGGGAAGCCAGTACCAGCGA CTGTCTGGAAAGGACGACAATGGCAGTCGTGGTCCCCACCATCTCGATGG TGGGGATGCGGTGCGGAGACCTCTGCTCGCTGACAAGGAGGAGTCCAAAT GGTACTAAAAGCTTTACGTAATATTATTGTGAGTGTTGCTTTCCCGTTTA AGGTTTTTAAACATATTAGACAATTTCTGATTTAAAGAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12746-RB | 1403 | CG12746-RB | 17..1352 | 1..1336 | 6680 | 100 | Plus |
CG12746-RD | 1455 | CG12746-RD | 171..1394 | 113..1336 | 6120 | 100 | Plus |
CG12746.b | 1273 | CG12746.b | 29..1252 | 113..1336 | 6120 | 100 | Plus |
CG12746-RD | 1455 | CG12746-RD | 17..129 | 1..113 | 565 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1392604..1393097 | 843..1336 | 2470 | 100 | Plus |
chr3R | 27901430 | chr3R | 1392126..1392544 | 424..842 | 2095 | 100 | Plus |
chr3R | 27901430 | chr3R | 1391747..1392057 | 113..423 | 1555 | 100 | Plus |
chr3R | 27901430 | chr3R | 1390530..1390642 | 1..113 | 565 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5566945..5567438 | 843..1336 | 2470 | 100 | Plus |
3R | 32079331 | 3R | 5566467..5566885 | 424..842 | 2095 | 100 | Plus |
3R | 32079331 | 3R | 5566088..5566398 | 113..423 | 1555 | 100 | Plus |
3R | 32079331 | 3R | 5564871..5564983 | 1..113 | 565 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5307776..5308269 | 843..1336 | 2470 | 100 | Plus |
3R | 31820162 | 3R | 5307298..5307716 | 424..842 | 2095 | 100 | Plus |
3R | 31820162 | 3R | 5306919..5307229 | 113..423 | 1555 | 100 | Plus |
3R | 31820162 | 3R | 5305702..5305814 | 1..113 | 565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1390530..1390641 | 1..112 | 100 | -> | Plus |
chr3R | 1391747..1392057 | 113..423 | 100 | -> | Plus |
chr3R | 1392126..1392544 | 424..842 | 100 | -> | Plus |
chr3R | 1392604..1393097 | 843..1337 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RE | 1..1092 | 167..1258 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RE | 1..1092 | 167..1258 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RB | 1..1092 | 167..1258 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RE | 1..1092 | 167..1258 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RB | 1..1092 | 167..1258 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RB | 1..1334 | 1..1334 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RB | 1..1333 | 1..1333 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RB | 7..1339 | 1..1333 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RB | 1..1334 | 1..1334 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12746-RB | 7..1339 | 1..1333 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5564871..5564982 | 1..112 | 100 | -> | Plus |
3R | 5566088..5566398 | 113..423 | 100 | -> | Plus |
3R | 5566467..5566885 | 424..842 | 100 | -> | Plus |
3R | 5566945..5567438 | 843..1337 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5564871..5564982 | 1..112 | 100 | -> | Plus |
3R | 5566088..5566398 | 113..423 | 100 | -> | Plus |
3R | 5566467..5566885 | 424..842 | 100 | -> | Plus |
3R | 5566945..5567438 | 843..1337 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5564871..5564982 | 1..112 | 100 | -> | Plus |
3R | 5566088..5566398 | 113..423 | 100 | -> | Plus |
3R | 5566467..5566885 | 424..842 | 100 | -> | Plus |
3R | 5566945..5567438 | 843..1337 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1390593..1390704 | 1..112 | 100 | -> | Plus |
arm_3R | 1391810..1392120 | 113..423 | 100 | -> | Plus |
arm_3R | 1392189..1392607 | 424..842 | 100 | -> | Plus |
arm_3R | 1392667..1393160 | 843..1337 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5306919..5307229 | 113..423 | 100 | -> | Plus |
3R | 5307298..5307716 | 424..842 | 100 | -> | Plus |
3R | 5307776..5308269 | 843..1337 | 99 | Plus | |
3R | 5305702..5305813 | 1..112 | 100 | -> | Plus |
Translation from 166 to 1257
> RE23632.pep MTASKEGQESRRTLSDSSAEDVRNTGSRTRTNDDEMWRNELAMNTDSSSV QPEKREERSHRTGNSNAKLSDAVDVVLRVLLVITFFKLETMTAFKREIHE EELWLYKNPRRPDIVRGGELLFWVIVAPFLVTIAFYWYTRDRRDFRAASW AWTLALCMNGIPTSVLKITVGRPRPDYFYRCFPDGVMVLNTTSNGVDTSI LDFNCTGLPGDINEGRKSFPSGHSSFAFASFGFIAYYIGAKLHAFDSRGR GHTWRLCIAVIPLFIALLVAVSRTCDYHHHWQDVTIGGLIGLFAGYISYT QYYPSIFCPDAGIPLVRWPSREGSQYQRLSGKDDNGSRGPHHLDGGDAVR RPLLADKEESKWY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11605-PA | 356 | GF11605-PA | 1..356 | 1..363 | 1459 | 74.1 | Plus |
Dana\GF23463-PA | 331 | GF23463-PA | 78..219 | 161..303 | 190 | 34.9 | Plus |
Dana\GF13080-PA | 377 | GF13080-PA | 191..336 | 152..297 | 187 | 31.6 | Plus |
Dana\GF11822-PA | 347 | GF11822-PA | 196..336 | 152..292 | 170 | 31.3 | Plus |
Dana\GF10980-PA | 345 | GF10980-PA | 140..286 | 152..298 | 165 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12892-PA | 409 | GG12892-PA | 50..409 | 1..363 | 1665 | 89.3 | Plus |
Dere\GG10557-PA | 372 | GG10557-PA | 189..340 | 152..298 | 196 | 32.3 | Plus |
Dere\GG16258-PA | 340 | GG16258-PA | 149..292 | 163..307 | 190 | 34.7 | Plus |
Dere\GG13182-PA | 337 | GG13182-PA | 60..265 | 143..348 | 179 | 28.8 | Plus |
Dere\GG23436-PA | 351 | GG23436-PA | 200..340 | 152..292 | 156 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22403-PA | 342 | GH22403-PA | 6..342 | 9..363 | 1120 | 60 | Plus |
Dgri\GH16694-PA | 345 | GH16694-PA | 153..298 | 163..309 | 205 | 35.3 | Plus |
Dgri\GH21309-PA | 380 | GH21309-PA | 208..342 | 161..297 | 191 | 34.3 | Plus |
Dgri\GH20575-PA | 365 | GH20575-PA | 216..357 | 151..292 | 166 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12746-PE | 363 | CG12746-PE | 1..363 | 1..363 | 1950 | 100 | Plus |
CG12746-PD | 363 | CG12746-PD | 1..363 | 1..363 | 1950 | 100 | Plus |
CG12746-PB | 363 | CG12746-PB | 1..363 | 1..363 | 1950 | 100 | Plus |
wun-PA | 300 | CG8804-PA | 123..268 | 158..298 | 184 | 32.5 | Plus |
wun-PB | 379 | CG8804-PB | 202..347 | 158..298 | 184 | 32.5 | Plus |
wun-PC | 364 | CG8804-PC | 202..341 | 158..297 | 183 | 31.8 | Plus |
CG11426-PA | 340 | CG11426-PA | 149..292 | 163..307 | 178 | 32.5 | Plus |
CG11425-PA | 305 | CG11425-PA | 14..247 | 69..291 | 171 | 26.6 | Plus |
laza-PA | 334 | CG11440-PA | 78..210 | 161..292 | 171 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24490-PA | 340 | GI24490-PA | 34..316 | 36..325 | 1097 | 67.6 | Plus |
Dmoj\GI19743-PA | 298 | GI19743-PA | 124..266 | 161..298 | 198 | 35.6 | Plus |
Dmoj\GI19768-PA | 375 | GI19768-PA | 226..369 | 154..297 | 173 | 30.7 | Plus |
Dmoj\GI13921-PA | 361 | GI13921-PA | 78..216 | 161..298 | 169 | 31.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21673-PA | 359 | GL21673-PA | 1..359 | 1..363 | 1346 | 68.9 | Plus |
Dper\GL16886-PA | 306 | GL16886-PA | 123..268 | 158..298 | 196 | 34.2 | Plus |
Dper\GL23165-PA | 343 | GL23165-PA | 132..300 | 145..314 | 187 | 31.4 | Plus |
Dper\GL23176-PA | 274 | GL23176-PA | 36..205 | 116..297 | 161 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11785-PA | 359 | GA11785-PA | 1..359 | 1..363 | 1358 | 69.8 | Plus |
Dpse\GA21332-PB | 365 | GA21332-PB | 203..336 | 158..291 | 195 | 34.3 | Plus |
Dpse\GA21332-PA | 386 | GA21332-PA | 203..348 | 158..298 | 195 | 33.6 | Plus |
Dpse\GA21332-PC | 306 | GA21332-PC | 123..268 | 158..298 | 190 | 33.6 | Plus |
Dpse\GA10999-PA | 343 | GA10999-PA | 132..300 | 145..314 | 187 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10814-PA | 407 | GM10814-PA | 50..407 | 1..363 | 1678 | 92 | Plus |
Dsec\GM20603-PA | 372 | GM20603-PA | 189..340 | 152..298 | 192 | 31.6 | Plus |
Dsec\GM22448-PA | 340 | GM22448-PA | 127..292 | 137..307 | 180 | 31.1 | Plus |
Dsec\GM22093-PA | 337 | GM22093-PA | 60..216 | 143..298 | 176 | 30.9 | Plus |
Dsec\GM22449-PA | 305 | GM22449-PA | 111..247 | 159..291 | 157 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19793-PA | 407 | GD19793-PA | 50..407 | 1..363 | 1569 | 86 | Plus |
Dsim\GD10076-PA | 372 | GD10076-PA | 189..340 | 152..298 | 198 | 31.6 | Plus |
Dsim\GD15031-PA | 340 | GD15031-PA | 127..292 | 137..307 | 178 | 31.1 | Plus |
Dsim\GD12067-PA | 343 | GD12067-PA | 60..216 | 143..298 | 177 | 30.9 | Plus |
Dsim\GD15032-PA | 305 | GD15032-PA | 111..247 | 159..291 | 165 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24555-PA | 327 | GJ24555-PA | 1..326 | 1..362 | 1123 | 58.6 | Plus |
Dvir\GJ18026-PA | 378 | GJ18026-PA | 201..346 | 158..298 | 197 | 34.2 | Plus |
Dvir\GJ11638-PA | 337 | GJ11638-PA | 145..297 | 163..315 | 183 | 33.8 | Plus |
Dvir\GJ13711-PA | 340 | GJ13711-PA | 78..216 | 161..298 | 170 | 31.2 | Plus |
Dvir\GJ18273-PA | 332 | GJ18273-PA | 165..306 | 151..292 | 163 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14299-PA | 357 | GK14299-PA | 11..356 | 5..355 | 1184 | 63.9 | Plus |
Dwil\GK21745-PA | 385 | GK21745-PA | 212..354 | 161..298 | 199 | 35.6 | Plus |
Dwil\GK16761-PA | 362 | GK16761-PA | 166..309 | 163..307 | 173 | 31.8 | Plus |
Dwil\GK17452-PA | 349 | GK17452-PA | 78..219 | 161..303 | 173 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10136-PA | 404 | GE10136-PA | 50..404 | 1..363 | 1549 | 84.3 | Plus |
Dyak\GE22302-PA | 369 | GE22302-PA | 186..337 | 152..298 | 197 | 31.6 | Plus |
Dyak\GE19508-PA | 334 | GE19508-PA | 60..216 | 143..298 | 175 | 32.5 | Plus |
Dyak\GE19506-PA | 340 | GE19506-PA | 127..284 | 137..298 | 175 | 30.4 | Plus |
Dyak\GE23019-PA | 340 | GE23019-PA | 127..284 | 137..298 | 174 | 30.4 | Plus |
Translation from 166 to 1257
> RE23632.hyp MTASKEGQESRRTLSDSSAEDVRNTGSRTRTNDDEMWRNELAMNTDSSSV QPEKREERSHRTGNSNAKLSDAVDVVLRVLLVITFFKLETMTAFKREIHE EELWLYKNPRRPDIVRGGELLFWVIVAPFLVTIAFYWYTRDRRDFRAASW AWTLALCMNGIPTSVLKITVGRPRPDYFYRCFPDGVMVLNTTSNGVDTSI LDFNCTGLPGDINEGRKSFPSGHSSFAFASFGFIAYYIGAKLHAFDSRGR GHTWRLCIAVIPLFIALLVAVSRTCDYHHHWQDVTIGGLIGLFAGYISYT QYYPSIFCPDAGIPLVRWPSREGSQYQRLSGKDDNGSRGPHHLDGGDAVR RPLLADKEESKWY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12746-PE | 363 | CG12746-PE | 1..363 | 1..363 | 1950 | 100 | Plus |
CG12746-PD | 363 | CG12746-PD | 1..363 | 1..363 | 1950 | 100 | Plus |
CG12746-PB | 363 | CG12746-PB | 1..363 | 1..363 | 1950 | 100 | Plus |
wun-PA | 300 | CG8804-PA | 123..268 | 158..298 | 184 | 32.5 | Plus |
wun-PB | 379 | CG8804-PB | 202..347 | 158..298 | 184 | 32.5 | Plus |