BDGP Sequence Production Resources |
Search the DGRC for RE23670
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 236 |
Well: | 70 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG10914-RA |
Protein status: | RE23670.pep: gold |
Preliminary Size: | 1879 |
Sequenced Size: | 2073 |
Gene | Date | Evidence |
---|---|---|
CG10914 | 2001-12-14 | Blastp of sequenced clone |
CG10914 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10914 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10914 | 2008-04-29 | Release 5.5 accounting |
CG10914 | 2008-08-15 | Release 5.9 accounting |
CG10914 | 2008-12-18 | 5.12 accounting |
2073 bp (2073 high quality bases) assembled on 2001-12-14
GenBank Submission: AY071190
> RE23670.complete ACTGTGAGAATTCTTGTGGGCATTGCAAAATGTTTAAAACCACACGTTTA TATAAAATTATAAATAAAAATGTGGTTATCACATGTTCGAGGCGGCAGAA TACCGCCGCTGAAGTGGGACAGAGCTTTCGGCAGAGGGCGTGGCTGCTCG CCAGAGAGCGGTACAAGGATCATGAGCACGTTCATTACAGCTCTGTTCTG GAGACCAAAATAAAACCCTCTTTCTCGATTCCTGAGACACAACAGCATTT GCCCGACGACTGGATGGACGACTACGAGTTCTATCAGGGCGCCCAGGAGG GAGGGAATAAGCAGGGCACACCGGATCCTTCGTTACCCGCCTCAAAGGTT CCATGCAACGGCTGCGGCGCAGACCTTCATTGCACGAATGCCTCCCTGCC AGGCTATATACCAAGTGAAATATTCAGGGATAGGACGCAGCAGGAACTGC AAACGATCACCTGCAAGCGTTGTCACTTTCTGAACCACTACAACATCGCA TTGGATGTGGTGGTGGCCCCATCGACCTATGTGGACACCATATCCCGCAT TCAAGACAAATTTGCACTGGCTATTGTTCTGGTGGACCTTCTCGATTTTC CCTGCTCCATTTGGCCGGGCATGCAAAACATATTGGGCGCAAAGCGACCC GTCTTCCTGGTGGGCAACAAGGTCGATCTGCTGCCGCGCGACTCCAACAT CTATCTTCAGCATATTAAGGATTCTCTGCAGCGCGAGTTCATCAAGCATG GCGGTGGAAATGGTCTAAATATCAAGAATGTCAGTTTGATATCCGCCAAA ACGGGCTATGGCATCGAGGAGCTAATAACGCAGCTGCACAAAACGTGGGC CTACAAAGGCGATGTCTATCTGGTGGGCTGCACCAATGTGGGCAAGAGCT CGCTGTTCAACATTCTGCTTAACTCGGACTACTGCCGGCCGGAGGCCAGT GACCTGGTGCGCAAGGCCACCACCTGTCCGTGGCCGGGCACCACACTCAA ACTGCTGCGGTTTCCAATCTTGCGTCCATCGAACGATCGAGTCTATCAGC GCTTTAAGAGATTGGTTTCGGAGCGCAGCGAGAAGGCGGAAATGGAAAAG GAGCGTCGCGCAGTGGCAAGGGAAACGGGTTCAGCGGCAGCTGCTCAACC AGTGGCTCCGGTTGGACGCACCTTCGATCGACGCGAAAATCTCCATGATG CCTTTGCCATGGCCGGTGGCTCGCGACCGATTACAACGCTAAACGATCGG GGCAAGGAGTACAAGGAAGCGCGTTGGGTCTACGACACACCGGGTGTGAT GCAACCCGACCAAATATCTCCCCTGCTCACCGCCGAGGAGCTGGTAAAGC TGCAGCCCGCCACCATGATCCGACCGCGCGCCTTTCGGCTGCGGCCCCAG ATGAGCATACTACTGGGCGGTTTGGCCAGATTGGATCTGCTGGAAATAAC AAGCCCAAGGAAACACTTTGACTGGCTGAAGGTGTTTGTATTTGCCTCAG AGCATCTTCCCATCATGATAGCAGATACACAGGAGGCGGAAAGCGTGTAC AAAAGATACGTGGGTTCGCCCTTTCTGGGTGTTCCCTTCGCTAGCGAGAA CTTGGAGGCCCGCCTGCGACGCTGGCCGGGATTGCAATGCAAGGATGGGG ATATTGTGCTGGCAAGTGAAGGAAGGAACGAGGAAACGAGGCTTAACTGT GATATTACGCTCAGCTCTGCGGGCTGGATGGGAATCCTGCTGCCGGGCCA CTCGGAGTGTCGTCTACGGGCCTGGACACCAAAGGCGGCAGGGATTTACA GACGTGAACCGGCTTTAATACCTTTAGCCGATCGATTGGTTGGCAAGCAC ATAAGGTATTCCCTGGCCTACAACACCGCCAAGCCCTTTGTTTACAAAAA ATAAAAAACAAATTGTTTATAAATTGTAAATAAATACAATTGTTTAAATT ACTTAATAATATATTCTACCAAACTAAAGCAATTTGCACCGCTTTAGTTA TTTTCAGCATACCCCGATTTTTATAATAAAGTTTGTGCTATTATAAAAAA AAAAAAGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10914-RA | 2044 | CG10914-RA | 1..2044 | 1..2044 | 10220 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 14045422..14047466 | 1..2045 | 10105 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 18158267..18160311 | 1..2045 | 10225 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 18159466..18161510 | 1..2045 | 10225 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 4810..4844 | 1495..1530 | 123 | 86.1 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1452..1547 | 8..103 | 119 | 62.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 14045422..14047316 | 1..1895 | 98 | == | Plus |
chr2R | 14047387..14047459 | 1966..2038 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10914-RA | 1..1875 | 30..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10914-RA | 1..1875 | 30..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10914-RA | 1..1875 | 30..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10914-RA | 1..1875 | 30..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10914-RA | 1..1875 | 30..1904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10914-RA | 1..2044 | 1..2044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10914-RA | 1..2044 | 1..2044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10914-RA | 11..2054 | 1..2044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10914-RA | 1..2044 | 1..2044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10914-RA | 11..2054 | 1..2044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18158267..18160310 | 1..2044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18158267..18160310 | 1..2044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18158267..18160310 | 1..2044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 14045772..14047815 | 1..2044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18159466..18161509 | 1..2044 | 100 | Plus |
Translation from 2 to 1903
> RE23670.hyp CENSCGHCKMFKTTRLYKIINKNVVITCSRRQNTAAEVGQSFRQRAWLLA RERYKDHEHVHYSSVLETKIKPSFSIPETQQHLPDDWMDDYEFYQGAQEG GNKQGTPDPSLPASKVPCNGCGADLHCTNASLPGYIPSEIFRDRTQQELQ TITCKRCHFLNHYNIALDVVVAPSTYVDTISRIQDKFALAIVLVDLLDFP CSIWPGMQNILGAKRPVFLVGNKVDLLPRDSNIYLQHIKDSLQREFIKHG GGNGLNIKNVSLISAKTGYGIEELITQLHKTWAYKGDVYLVGCTNVGKSS LFNILLNSDYCRPEASDLVRKATTCPWPGTTLKLLRFPILRPSNDRVYQR FKRLVSERSEKAEMEKERRAVARETGSAAAAQPVAPVGRTFDRRENLHDA FAMAGGSRPITTLNDRGKEYKEARWVYDTPGVMQPDQISPLLTAEELVKL QPATMIRPRAFRLRPQMSILLGGLARLDLLEITSPRKHFDWLKVFVFASE HLPIMIADTQEAESVYKRYVGSPFLGVPFASENLEARLRRWPGLQCKDGD IVLASEGRNEETRLNCDITLSSAGWMGILLPGHSECRLRAWTPKAAGIYR REPALIPLADRLVGKHIRYSLAYNTAKPFVYKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10914-PA | 624 | CG10914-PA | 1..624 | 10..633 | 3293 | 100 | Plus |
Translation from 29 to 1903
> RE23670.pep MFKTTRLYKIINKNVVITCSRRQNTAAEVGQSFRQRAWLLARERYKDHEH VHYSSVLETKIKPSFSIPETQQHLPDDWMDDYEFYQGAQEGGNKQGTPDP SLPASKVPCNGCGADLHCTNASLPGYIPSEIFRDRTQQELQTITCKRCHF LNHYNIALDVVVAPSTYVDTISRIQDKFALAIVLVDLLDFPCSIWPGMQN ILGAKRPVFLVGNKVDLLPRDSNIYLQHIKDSLQREFIKHGGGNGLNIKN VSLISAKTGYGIEELITQLHKTWAYKGDVYLVGCTNVGKSSLFNILLNSD YCRPEASDLVRKATTCPWPGTTLKLLRFPILRPSNDRVYQRFKRLVSERS EKAEMEKERRAVARETGSAAAAQPVAPVGRTFDRRENLHDAFAMAGGSRP ITTLNDRGKEYKEARWVYDTPGVMQPDQISPLLTAEELVKLQPATMIRPR AFRLRPQMSILLGGLARLDLLEITSPRKHFDWLKVFVFASEHLPIMIADT QEAESVYKRYVGSPFLGVPFASENLEARLRRWPGLQCKDGDIVLASEGRN EETRLNCDITLSSAGWMGILLPGHSECRLRAWTPKAAGIYRREPALIPLA DRLVGKHIRYSLAYNTAKPFVYKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12654-PA | 566 | GF12654-PA | 5..566 | 62..624 | 2435 | 77.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21848-PA | 623 | GG21848-PA | 1..623 | 1..624 | 3066 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21055-PA | 649 | GH21055-PA | 1..649 | 1..624 | 2290 | 64.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10914-PA | 624 | CG10914-PA | 1..624 | 1..624 | 3293 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18656-PA | 547 | GI18656-PA | 1..547 | 79..624 | 2097 | 68.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11551-PA | 623 | GL11551-PA | 1..623 | 1..624 | 2558 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10638-PA | 623 | GA10638-PA | 1..623 | 1..624 | 2561 | 73.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21850-PA | 624 | GM21850-PA | 1..624 | 1..624 | 3148 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11344-PA | 499 | GD11344-PA | 14..499 | 144..624 | 2393 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21673-PA | 647 | GJ21673-PA | 1..647 | 1..624 | 2242 | 65.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19491-PA | 644 | GK19491-PA | 38..644 | 21..624 | 2200 | 68.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11927-PA | 623 | GE11927-PA | 1..623 | 1..624 | 3065 | 90.4 | Plus |