Clone RE23893 Report

Search the DGRC for RE23893

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:238
Well:93
Vector:pFlc-1
Associated Gene/TranscriptCG43897-RH
Protein status:RE23893.pep: gold
Sequenced Size:2814

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG33205 2002-12-10 Blastp of sequenced clone
CG33205 2003-01-01 Sim4 clustering to Release 3
CG33205 2008-04-29 Release 5.5 accounting
CG33205 2008-08-15 Release 5.9 accounting
CG33205 2008-12-18 5.12 accounting

Clone Sequence Records

RE23893.complete Sequence

2814 bp (2814 high quality bases) assembled on 2002-12-10

GenBank Submission: BT003206

> RE23893.complete
AGTTTAAGATACATTTCTAAATGTGACAGTAGTGAAACGAACAACGACCG
ACATTTAACGATTAACATTAAGACCAACTGAAGTAGGGGAAAGTGCTTAG
GATTCCTTTTTTCCGAATTCGCCCACATACCGCCAGCAAAGAAGAACAAC
AAAACAAAAACCGATAAGCGGAACTAAGTCGCGTGGAAGATTTTAAAAAA
TATTCTTTTTATCAACAATATTTTTTGAAAAACTTCCAAAGACCCAAAGA
CATTCGAAGCAGTAGCCGACAACAGAGAAGCTTCGAGGCAAACAAAGGCC
AGCCAACAAAGCAAGCGAAGTTCAACATTTCCCAAGAAGCAACTCGCAAC
TCTGCAGGAAGAAGCAGTCCAAAAAGGAAACAACCAAAAACAACCATACA
AAATGGCTGCCCTACAACGGAAGCTGGTGCACAAGCAGTTCAACTCGCCC
ATGGGCCTCTATTCCCAGGAGAACGTGAAGGCCACATTGAACCGCGAGCT
GAAAGCCTTCGGCGGCGAGGGGATTGAAGTCGACGATCAAATAACGAAGC
CCCTGAACTTGGCCAACTCGGCCGTTCTGCGCGCCGTCGAAGAGGAAGAA
CAACAAGCCAAATGTGGCTACAAGCGTGTGGCCTGGCCACCGGCCTCCGA
GGAGCGGATCATCCGGGAGTTCACCCCCCAGCCGCAGACTCAGAGTCCGG
CTCCCGGTGCCGGAGGCTACTATCCGCAGGCCCACGCTCCCACAGCAGCA
GCTGCCGCTCCACCTCAGCAGCAGCAGTACGGTGCTCCGTCTTACGATGG
CCAGCAGCCTGGAGCACAGTGGCAACAGCAACAGCAGCAGCAGCAGGTTC
CGCAGCAGCAGTATCAGCCTCAATCGCAGGCTCAGGCGCCCTATCAGCCA
CCACAGTGGAACCAGCCGCAGCAGCAGCAGCAGCAGCCATCGTACCAGGC
TTCACCGTACCAACAGCAGCAACAGCAACAGCCATCCTATTACCCACAGC
AAAATGGTGGCTCGACCTATGCTCAACCCCCATACAATTCTTATTCGCAG
CCCCAGTTGCCCTACTCGCAGGATCAGACTGATCTGCAGCAGCAGCAACA
ACAGCAGCAGCAGCAGTATCCGGGAGCCTACGCTGGCCAGGATAGCTACC
GGGGCGCCAGTCCCGGCATCATCACCCTGCGCAAGGAGGCTCCAGTCAGC
CAGAAGCCTGCACCAGTCTACACTTCGCAGCCAGCCGCCGTCAGTTATCA
GGGAGGCAGCAAATTGCGCGGAGATTTGAAATGGCCACCACCGGAGTACA
AGGAGGCCGCGGCTCGCGAGAACGAGGAACGACGCCAGTTGGCGTTGGGT
CCCGTCTGCCGTCCCAGGAGAGTTAACCGGGACTACACACCCTTCTTTGC
CAAGCACCAGTTGAACAATGGCTATCCCAGCTACAAGGTGCCTCCGGGCA
CCCAGCACATTTTCGGCTAAGTTTGGGAAAGACTCTTTCAGATGCCAAGA
ACAACAACAACAACAACAGCATAAAATTCAATGGAACCCACTTCATAATA
ATACTGAAAACGATCAATGTCTATGTTACTAAAACGAAACACTAACGAAT
CAATCTATCTATATAGGATATATACAATTGTTATACTAATCTTAAATGAC
CACTAACGACGCCATATATACTATACATATATTACGAAACGAACCCATGT
TAGGTGAATGCAATACTACAGCAGGTGTGACACCAACCGGTGAATCATCT
TCAATATTATCCGTATAAATATAGATGCTCGCTGATTCCACGATCAGATT
GCATCCACTCGAGATAATACTAATGATGATTCGTGGGCTTGGAACCCTGA
TCCAAGCTGCCCAAACGGTGCAGCAATGGATAACGAAAATCTCCATGCAC
CCATACTATATACACATATTTGGAGCATGTGCATATAGTATGGCTTAGAT
TGGAGACCAGAACTATATGCTATATGCTATATAGTGCTAGATGCTAAGAT
GATTGTTAAACTATTAACTAGCAAATGAAATGGAAACGATGCGACCCAAG
ACGGAAAAATGATAATGAGATTGAACCTTGTCTTAGATGTAAGAGCAATA
CTAAACTATTTATTGTGAGCATATTCTATTTAACGCAGATCCCGTGCAGC
GATGAGCTCAAGGAATCCTCTGGGCGAACCACAATCACCAATTGTAAATT
GTTCCCCGATATCGTGGCACATCCTTTGGAGCCGCTCGCACGGGTTTCTC
AATGTTTATTGTTTGAGTTTGCATGCTTTTTGCTTATATCTATATTATAT
GCACATATATATATATATATATATATATTTACCTTGAAATTGTTAAACTG
CAAATTATAAAAAACCGTCAAATATCCCGCTATAAGTAAGTTATACAAGA
AACCAGGCGACCGCGCCGAAACAAATCTGTGAGTTCGAAATATGTCATTC
AAGGATATTAAATTCAACGCGCACGTTCGGATTATGCCACCCCTATAAGG
CCCCATCAGTCCCCCTTCCAGCCGTCTGAGGTCGGCCCTTTAGTTCGCCC
GCTGACCCCAGGCAATAATATGAGGATGCCTTTGCCTGCTGGACGAGCAG
CCGCGGACTCAGGGCCCAGATCTTGGCGTATGGATGGGGGATGAGGCCGG
GGCGAGATCGAGGACGGGCCAACACAACTCTCAGACTTTACCAATTACTA
TGACCAGCAATGTCTATACGCAACTACACTACGATGTATAACTAATATGA
AATGAGAAACTAAATAAACGGCAAGTTTTGAATACTCGCGACGAGAAGAA
AAAAAAAAAAAAAA

RE23893.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:30:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG33205-RH 2800 CG33205-RH 1..2800 1..2800 14000 100 Plus
CG33205-RF 2797 CG33205-RF 1..2797 1..2800 13930 99.8 Plus
CG33205-RB 3238 CG33205-RB 1206..3238 768..2800 10165 100 Plus
CG33205-RB 3238 CG33205-RB 1..768 1..768 3840 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:04:53
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 9824729..9826147 1380..2798 7050 99.8 Plus
chr3L 24539361 chr3L 9823987..9824482 764..1253 2355 98.8 Plus
chr3L 24539361 chr3L 9811863..9812339 36..522 2190 97.1 Plus
chr3L 24539361 chr3L 9822429..9822581 616..768 765 100 Plus
chr3L 24539361 chr3L 9824540..9824669 1252..1381 650 100 Plus
chr3L 24539361 chr3L 9816343..9816439 521..617 485 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:43:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:04:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9832927..9834347 1380..2800 7105 100 Plus
3L 28110227 3L 9832191..9832680 764..1253 2450 100 Plus
3L 28110227 3L 9820074..9820560 36..522 2435 100 Plus
3L 28110227 3L 9830633..9830785 616..768 765 100 Plus
3L 28110227 3L 9832738..9832867 1252..1381 650 100 Plus
3L 28110227 3L 9824545..9824641 521..617 485 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:06:30
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 9826027..9827447 1380..2800 7105 100 Plus
3L 28103327 3L 9825291..9825780 764..1253 2450 100 Plus
3L 28103327 3L 9813174..9813660 36..522 2435 100 Plus
3L 28103327 3L 9823733..9823885 616..768 765 100 Plus
3L 28103327 3L 9825838..9825967 1252..1381 650 100 Plus
3L 28103327 3L 9817645..9817741 521..617 485 100 Plus
3L 28103327 3L 9812319..9812353 1..35 175 100 Plus
Blast to na_te.dros performed 2019-03-16 12:04:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6916 743..939 240 60.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2282..2673 703..1108 239 57.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6735..7009 722..984 238 58 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6777..7078 813..1116 209 57.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2385..2632 740..1004 158 56.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6814..7036 736..972 152 58.7 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 3724..3806 2329..2246 120 61.9 Minus

RE23893.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:06:11 Download gff for RE23893.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 9824541..9824668 1253..1380 100 -> Plus
chr3L 9822430..9822581 617..768 100 -> Plus
chr3L 9823992..9824039 769..816 100 == Plus
chr3L 9824092..9824481 869..1252 85 -> Plus
chr3L 9811008..9811042 1..35 100 -> Plus
chr3L 9811863..9812338 36..521 97 -> Plus
chr3L 9816344..9816438 522..616 100 -> Plus
chr3L 9824730..9826147 1381..2798 94   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:26:03 Download gff for RE23893.complete
Subject Subject Range Query Range Percent Splice Strand
CG33205-RH 1..1068 403..1470 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:01:25 Download gff for RE23893.complete
Subject Subject Range Query Range Percent Splice Strand
CG33205-RH 1..1068 403..1470 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 12:49:18 Download gff for RE23893.complete
Subject Subject Range Query Range Percent Splice Strand
CG43897-RH 1..1068 403..1470 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:51:49 Download gff for RE23893.complete
Subject Subject Range Query Range Percent Splice Strand
CG33205-RH 1..1068 403..1470 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:35:27 Download gff for RE23893.complete
Subject Subject Range Query Range Percent Splice Strand
CG43897-RH 1..1068 403..1470 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:26:03 Download gff for RE23893.complete
Subject Subject Range Query Range Percent Splice Strand
CG33205-RH 1..2798 1..2798 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:01:25 Download gff for RE23893.complete
Subject Subject Range Query Range Percent Splice Strand
CG33205-RH 1..2798 1..2798 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:49:18 Download gff for RE23893.complete
Subject Subject Range Query Range Percent Splice Strand
CG43897-RH 5..2802 1..2798 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:51:49 Download gff for RE23893.complete
Subject Subject Range Query Range Percent Splice Strand
CG33205-RH 1..2798 1..2798 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:35:27 Download gff for RE23893.complete
Subject Subject Range Query Range Percent Splice Strand
CG43897-RH 5..2802 1..2798 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:06:11 Download gff for RE23893.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9820074..9820559 36..521 100 -> Plus
3L 9824546..9824640 522..616 100 -> Plus
3L 9830634..9830785 617..768 100 -> Plus
3L 9832196..9832679 769..1252 100 -> Plus
3L 9832739..9832866 1253..1380 100 -> Plus
3L 9832928..9834345 1381..2798 100   Plus
3L 9819219..9819253 1..35 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:06:11 Download gff for RE23893.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9820074..9820559 36..521 100 -> Plus
3L 9824546..9824640 522..616 100 -> Plus
3L 9830634..9830785 617..768 100 -> Plus
3L 9832196..9832679 769..1252 100 -> Plus
3L 9832739..9832866 1253..1380 100 -> Plus
3L 9832928..9834345 1381..2798 100   Plus
3L 9819219..9819253 1..35 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:06:11 Download gff for RE23893.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9820074..9820559 36..521 100 -> Plus
3L 9824546..9824640 522..616 100 -> Plus
3L 9830634..9830785 617..768 100 -> Plus
3L 9832196..9832679 769..1252 100 -> Plus
3L 9832739..9832866 1253..1380 100 -> Plus
3L 9832928..9834345 1381..2798 100   Plus
3L 9819219..9819253 1..35 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:49:18 Download gff for RE23893.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9823734..9823885 617..768 100 -> Plus
arm_3L 9812319..9812353 1..35 100 -> Plus
arm_3L 9813174..9813659 36..521 100 -> Plus
arm_3L 9817646..9817740 522..616 100 -> Plus
arm_3L 9825296..9825779 769..1252 100 -> Plus
arm_3L 9825839..9825966 1253..1380 100 -> Plus
arm_3L 9826028..9827445 1381..2798 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:23:46 Download gff for RE23893.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9813174..9813659 36..521 100 -> Plus
3L 9817646..9817740 522..616 100 -> Plus
3L 9823734..9823885 617..768 100 -> Plus
3L 9825296..9825779 769..1252 100 -> Plus
3L 9825839..9825966 1253..1380 100 -> Plus
3L 9826028..9827445 1381..2798 100   Plus
3L 9812319..9812353 1..35 100 -> Plus

RE23893.pep Sequence

Translation from 402 to 1469

> RE23893.pep
MAALQRKLVHKQFNSPMGLYSQENVKATLNRELKAFGGEGIEVDDQITKP
LNLANSAVLRAVEEEEQQAKCGYKRVAWPPASEERIIREFTPQPQTQSPA
PGAGGYYPQAHAPTAAAAAPPQQQQYGAPSYDGQQPGAQWQQQQQQQQVP
QQQYQPQSQAQAPYQPPQWNQPQQQQQQPSYQASPYQQQQQQQPSYYPQQ
NGGSTYAQPPYNSYSQPQLPYSQDQTDLQQQQQQQQQQYPGAYAGQDSYR
GASPGIITLRKEAPVSQKPAPVYTSQPAAVSYQGGSKLRGDLKWPPPEYK
EAAARENEERRQLALGPVCRPRRVNRDYTPFFAKHQLNNGYPSYKVPPGT
QHIFG*

RE23893.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:04:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24680-PA 467 GF24680-PA 353..466 241..354 581 93.9 Plus
Dana\GF24680-PA 467 GF24680-PA 1..177 1..140 492 63.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:04:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15415-PA 488 GG15415-PA 340..488 201..355 691 91 Plus
Dere\GG15415-PA 488 GG15415-PA 1..111 1..111 573 97.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:04:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15437-PA 490 GH15437-PA 337..490 201..355 579 71.9 Plus
Dgri\GH15436-PA 1305 GH15436-PA 1..77 1..77 369 87 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:21:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG43897-PH 355 CG43897-PH 1..355 1..355 1911 100 Plus
CG43897-PG 354 CG43897-PG 1..354 1..355 1894 99.7 Plus
CG43897-PF 354 CG43897-PF 1..354 1..355 1894 99.7 Plus
CG43897-PE 315 CG43897-PE 2..315 41..355 1691 99.7 Plus
CG43897-PQ 299 CG43897-PQ 17..299 72..355 1539 99.6 Plus
CG43897-PM 1385 CG43897-PM 1103..1385 72..355 1539 99.6 Plus
CG43897-PN 1339 CG43897-PN 1058..1339 72..355 1533 99.3 Plus
CG43897-PK 502 CG43897-PK 239..502 92..355 1317 91.7 Plus
CG43897-PR 446 CG43897-PR 184..446 92..355 1300 91.3 Plus
CG43897-PA 462 CG43897-PA 200..462 92..355 1300 91.3 Plus
CG43897-PJ 501 CG43897-PJ 239..501 92..355 1300 91.3 Plus
CG43897-PC 501 CG43897-PC 239..501 92..355 1300 91.3 Plus
CG43897-PB 501 CG43897-PB 239..501 92..355 1300 91.3 Plus
CG43897-PL 500 CG43897-PL 239..500 92..355 1294 90.9 Plus
CG43897-PI 206 CG43897-PI 18..206 164..355 782 78.5 Plus
CG43897-PP 123 CG43897-PP 1..122 1..122 634 100 Plus
CG43897-PM 1385 CG43897-PM 1..72 1..72 361 100 Plus
CG43897-PO 215 CG43897-PO 17..214 72..236 344 44.3 Plus
CG43897-PI 206 CG43897-PI 17..128 72..185 325 60.5 Plus
CG44085-PH 756 CG44085-PH 288..508 89..328 200 31.8 Plus
CG44085-PL 833 CG44085-PL 365..585 89..328 200 31.8 Plus
CG44085-PI 833 CG44085-PI 365..585 89..328 200 31.8 Plus
CG44085-PC 836 CG44085-PC 365..585 89..328 200 31.8 Plus
CG44085-PM 864 CG44085-PM 250..470 89..328 200 31.8 Plus
CG44085-PF 902 CG44085-PF 288..508 89..328 200 31.8 Plus
CG44085-PD 918 CG44085-PD 288..508 89..328 200 31.8 Plus
CG44085-PG 942 CG44085-PG 288..508 89..328 200 31.8 Plus
CG44085-PK 979 CG44085-PK 365..585 89..328 200 31.8 Plus
CG44085-PJ 979 CG44085-PJ 365..585 89..328 200 31.8 Plus
CG44085-PN 1007 CG44085-PN 365..585 89..328 200 31.8 Plus
CG44085-PP 2246 CG44085-PP 261..481 89..328 200 31.8 Plus
CG44085-PO 2381 CG44085-PO 250..470 89..328 200 31.8 Plus
NUCB1-PA 569 CG32190-PA 412..563 88..237 188 38.5 Plus
velo-PC 1833 CG10107-PC 49..220 114..251 185 37.9 Plus
velo-PA 1833 CG10107-PA 49..220 114..251 185 37.9 Plus
Lasp-PB 657 CG3849-PB 151..312 82..270 184 35.4 Plus
osa-PE 2555 CG7467-PE 1357..1509 107..256 183 39.4 Plus
osa-PC 2556 CG7467-PC 1358..1510 107..256 183 39.4 Plus
osa-PF 2559 CG7467-PF 1361..1513 107..256 183 39.4 Plus
osa-PA 2703 CG7467-PA 1505..1657 107..256 183 39.4 Plus
osa-PB 2716 CG7467-PB 1518..1670 107..256 183 39.4 Plus
osa-PD 2716 CG7467-PD 1518..1670 107..256 183 39.4 Plus
Lasp-PC 636 CG3849-PC 149..291 113..270 181 38.5 Plus
NUCB1-PA 569 CG32190-PA 363..537 108..283 179 34.2 Plus
CG15740-PB 975 CG15740-PB 144..274 95..237 178 41.1 Plus
CG44085-PH 756 CG44085-PH 325..579 92..343 177 29.1 Plus
CG44085-PL 833 CG44085-PL 402..656 92..343 177 29.1 Plus
CG44085-PI 833 CG44085-PI 402..656 92..343 177 29.1 Plus
CG44085-PC 836 CG44085-PC 402..656 92..343 177 29.1 Plus
CG44085-PM 864 CG44085-PM 287..541 92..343 177 29.1 Plus
CG44085-PF 902 CG44085-PF 325..579 92..343 177 29.1 Plus
CG44085-PD 918 CG44085-PD 325..579 92..343 177 29.1 Plus
CG44085-PG 942 CG44085-PG 325..579 92..343 177 29.1 Plus
CG44085-PK 979 CG44085-PK 402..656 92..343 177 29.1 Plus
CG44085-PJ 979 CG44085-PJ 402..656 92..343 177 29.1 Plus
CG44085-PN 1007 CG44085-PN 402..656 92..343 177 29.1 Plus
CG44085-PP 2246 CG44085-PP 298..552 92..343 177 29.1 Plus
CG44085-PO 2381 CG44085-PO 287..541 92..343 177 29.1 Plus
rn-PC 692 CG42277-PC 458..561 98..220 176 40.9 Plus
rn-PF 927 CG42277-PF 693..796 98..220 176 40.9 Plus
rn-PE 946 CG42277-PE 712..815 98..220 176 40.9 Plus
rn-PG 952 CG42277-PG 712..815 98..220 176 40.9 Plus
mam-PD 1594 CG8118-PD 717..916 95..285 176 33 Plus
mam-PB 1594 CG8118-PB 717..916 95..285 176 33 Plus
mam-PA 1594 CG8118-PA 717..916 95..285 176 33 Plus
NUCB1-PA 569 CG32190-PA 368..513 92..238 174 39.1 Plus
osa-PE 2555 CG7467-PE 225..398 79..252 174 33.5 Plus
osa-PC 2556 CG7467-PC 225..398 79..252 174 33.5 Plus
osa-PF 2559 CG7467-PF 225..398 79..252 174 33.5 Plus
osa-PA 2703 CG7467-PA 225..398 79..252 174 33.5 Plus
osa-PB 2716 CG7467-PB 225..398 79..252 174 33.5 Plus
osa-PD 2716 CG7467-PD 225..398 79..252 174 33.5 Plus
Ptip-PA 2294 CG32133-PA 805..916 139..260 174 41.8 Plus
NUCB1-PA 569 CG32190-PA 383..557 97..268 173 40.1 Plus
hdc-PC 1080 CG15532-PC 666..816 91..239 172 36 Plus
Lasp-PC 636 CG3849-PC 139..403 42..287 170 27.5 Plus
Ptip-PA 2294 CG32133-PA 799..986 55..238 168 32.5 Plus
mam-PD 1594 CG8118-PD 646..817 92..239 163 32.8 Plus
mam-PB 1594 CG8118-PB 646..817 92..239 163 32.8 Plus
mam-PA 1594 CG8118-PA 646..817 92..239 163 32.8 Plus
Ptip-PA 2294 CG32133-PA 815..1034 122..313 161 31.5 Plus
CG44085-PM 864 CG44085-PM 185..339 92..238 160 34.4 Plus
CG44085-PO 2381 CG44085-PO 185..339 92..238 160 34.4 Plus
Ptip-PA 2294 CG32133-PA 1109..1338 83..317 159 27.5 Plus
CG44085-PH 756 CG44085-PH 231..377 92..238 157 32.9 Plus
CG44085-PL 833 CG44085-PL 308..454 92..238 157 32.9 Plus
CG44085-PI 833 CG44085-PI 308..454 92..238 157 32.9 Plus
CG44085-PC 836 CG44085-PC 308..454 92..238 157 32.9 Plus
CG44085-PF 902 CG44085-PF 231..377 92..238 157 32.9 Plus
CG44085-PD 918 CG44085-PD 231..377 92..238 157 32.9 Plus
CG44085-PG 942 CG44085-PG 231..377 92..238 157 32.9 Plus
CG44085-PK 979 CG44085-PK 308..454 92..238 157 32.9 Plus
CG44085-PJ 979 CG44085-PJ 308..454 92..238 157 32.9 Plus
CG44085-PN 1007 CG44085-PN 308..454 92..238 157 32.9 Plus
CG44085-PP 2246 CG44085-PP 204..350 92..238 157 32.9 Plus
Lasp-PB 657 CG3849-PB 251..424 122..287 157 33 Plus
CG15740-PB 975 CG15740-PB 303..497 61..237 156 32.5 Plus
CG43897-PN 1339 CG43897-PN 2..34 41..73 154 93.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:04:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13037-PA 1629 GI13037-PA 1486..1628 202..355 609 76.4 Plus
Dmoj\GI13037-PA 1629 GI13037-PA 1..72 1..72 352 88.9 Plus
Dmoj\GI13037-PA 1629 GI13037-PA 1205..1240 72..107 193 94.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:04:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16300-PA 464 GL16300-PA 307..464 201..355 571 82.9 Plus
Dper\GL16298-PA 84 GL16298-PA 1..71 1..71 349 98.6 Plus
Dper\GL16300-PA 464 GL16300-PA 17..62 72..120 206 89.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:04:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23436-PA 464 GA23436-PA 307..463 201..354 567 82.8 Plus
Dpse\GA16639-PA 690 GA16639-PA 1..71 1..71 375 98.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:04:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25188-PA 496 GM25188-PA 339..496 201..355 741 96.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:05:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14220-PA 1212 GD14220-PA 1098..1212 241..355 630 100 Plus
Dsim\GD14220-PA 1212 GD14220-PA 1..72 1..72 382 100 Plus
Dsim\GD13148-PA 93 GD13148-PA 2..52 57..107 198 76.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:05:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12132-PA 468 GJ12132-PA 1..77 1..77 360 87 Plus
Dvir\GJ12133-PA 377 GJ12133-PA 17..55 72..110 189 89.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:05:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11012-PA 467 GK11012-PA 319..466 201..354 619 87.1 Plus
Dwil\GK11023-PA 595 GK11023-PA 1..71 1..71 367 95.8 Plus
Dwil\GK11012-PA 467 GK11012-PA 17..62 72..120 195 83.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:05:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21723-PA 500 GE21723-PA 348..500 201..355 692 94.2 Plus
Dyak\GE21723-PA 500 GE21723-PA 1..110 1..110 571 99.1 Plus

RE23893.hyp Sequence

Translation from 402 to 1469

> RE23893.hyp
MAALQRKLVHKQFNSPMGLYSQENVKATLNRELKAFGGEGIEVDDQITKP
LNLANSAVLRAVEEEEQQAKCGYKRVAWPPASEERIIREFTPQPQTQSPA
PGAGGYYPQAHAPTAAAAAPPQQQQYGAPSYDGQQPGAQWQQQQQQQQVP
QQQYQPQSQAQAPYQPPQWNQPQQQQQQPSYQASPYQQQQQQQPSYYPQQ
NGGSTYAQPPYNSYSQPQLPYSQDQTDLQQQQQQQQQQYPGAYAGQDSYR
GASPGIITLRKEAPVSQKPAPVYTSQPAAVSYQGGSKLRGDLKWPPPEYK
EAAARENEERRQLALGPVCRPRRVNRDYTPFFAKHQLNNGYPSYKVPPGT
QHIFG*

RE23893.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:38:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG43897-PH 355 CG43897-PH 1..355 1..355 1911 100 Plus
CG43897-PG 354 CG43897-PG 1..354 1..355 1894 99.7 Plus
CG43897-PF 354 CG43897-PF 1..354 1..355 1894 99.7 Plus
CG43897-PE 315 CG43897-PE 2..315 41..355 1691 99.7 Plus
CG43897-PQ 299 CG43897-PQ 17..299 72..355 1539 99.6 Plus